mRNA_E-fasciculatus_F_contig1264.2022.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1264.2022.1
Unique NamemRNA_E-fasciculatus_F_contig1264.2022.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE)

HSP 1 Score: 640 bits (1652), Expect = 1.670e-229
Identity = 316/340 (92.94%), Postives = 322/340 (94.71%), Query Frame = 3
Query:    3 FHPNHQARLRMQQGFGKQAQSKTPAKLXXXXXXXPPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAPGGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTSSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYVRRFAEAGVR 1022
            F+PN+QARLRMQQGFGKQ++S TPAKL        PAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAP GKAT FPVEV DRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRR+G LAPTELQSATTSSQ QQ  TSTTWFHHYASAPELVAKASLLLGVDDY KWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY RRFAEAGV+
Sbjct:   18 FNPNNQARLRMQQGFGKQSRSNTPAKLKTPAKAPYPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAPAGKATAFPVEVADRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQCQQXXTSTTWFHHYASAPELVAKASLLLGVDDYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYARRFAEAGVK 357          
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 2.530e-74
Identity = 154/381 (40.42%), Postives = 197/381 (51.71%), Query Frame = 3
Query:  111 AVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQ-------------KAPGGKATDFPVEVVDRIRERHGFEHF-------------------------------------------------------DEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMST----------------LKKSGRRRGSLAPTELQSATTSSQFQQ--QRTSTTWFHHYASAPELVAKASLLLGVD-DYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
            A P  T  R G+LP+D F+ FPPL+P+  +++               +  G+    P +V++ IR RHG E F                                                          LFPG+RLLHA+P V  V  FFT +ECD YI+ S                             P   +SAT  +      QRTSTTWFH +++ PEL+AKAS L+GV  +  +WEE QTVRYRPGE+F WHLDALPP+   ASKGGQR AT+LVYLT M    GGATAFRDLGPLRVRP+KG  L+FFPS GG    PFD R LHAGEVV  G + ++K+IAQLW  ++ Y P+VP+ + HE A   + ++
Sbjct:  191 AAPAATAARGGQLPDDDFATFPPLSPDTLKSIMGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEF 570          
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 5.590e-71
Identity = 131/247 (53.04%), Postives = 161/247 (65.18%), Query Frame = 3
Query:  300 LFPGIRLLHADPVVFEVEGFFTPQECDAYIAMST-------------LKKSGRRRGSLAPTELQSATTSSQFQQ--QRTSTTWFHHYASAPELVAKASLLLGVD-DYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
            LFPG+RLLHA+P V  V  FFT +ECD YI+ S                      GS  P   +SAT  +      QRTSTTWFH +++ PEL+AKAS L+GV  +  +WEE QTVRYRPGE+F WHLDALPP+   AS+GGQR AT+LVYLT M    GGATAFRDLGPLRVRP+KG  L+FFPS GG    PFD R LHAGEVV  G + ++K+IAQLW  +  Y P+VP+ + HE A   + ++
Sbjct:  100 LFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGS-GPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEF 344          
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA)

HSP 1 Score: 239 bits (611), Expect = 6.060e-71
Identity = 132/264 (50.00%), Postives = 168/264 (63.64%), Query Frame = 3
Query:  219 GGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTSSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGP-----LRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYV 995
            G  AT  P+  VD + +   F+ F        R+LH DP+V  V+ FFT +ECD YIAMS    +G + G    T   +    +  + QRTSTTWFHHY + PEL+AK+S L G+DD   +EEPQTVRY+P ++F WHLDAL P     SKGGQRTAT+LVYLT++    GGAT FRDLGP     L+V+PKKG  L+FFP+ GG   +PFD R LHAGEVV    K+ +K+IAQLW  +  Y P+VP  + H AA +PI  YV
Sbjct:  183 GFSATATPMATVD-VSKLPPFDKF--------RVLHIDPLVIAVDDFFTHEECDKYIAMSD-PTAGNKDGDAVMTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLDDIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKS-DKWIAQLWLREDSYEPTVPPENVHAAATEPISQYV 435          
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA)

HSP 1 Score: 233 bits (594), Expect = 5.720e-68
Identity = 127/245 (51.84%), Postives = 159/245 (64.90%), Query Frame = 3
Query:  297 KLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLK----KSGRRRGS-LAPTELQSATT---SSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
            K F   R+LH DP+V  V+ FFTP+ECDA IA ST       +  + G+ L P ++  + T    S+ + QRTSTTWFHHYA  PEL+AKA  L+G++D   +EEPQTVRYR  E F WHLDAL P+   A KGGQR AT+LVYLT++    GGAT FRDLG     PL+VRPKKG  L+FFP+ GG    P D R LH GE V   +  ++K+IAQLW  + PY P+ P G+SH +A  PI DY
Sbjct:  233 KPFSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGINDISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVAS-DAEQDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476          
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC)

HSP 1 Score: 225 bits (574), Expect = 4.370e-65
Identity = 129/280 (46.07%), Postives = 168/280 (60.00%), Query Frame = 3
Query:  186 PEQKQTLQKAPGGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRR--GSLAPTELQSATT---SSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECG-ASKGGQRTATVLVYLTNMHANGGGATAFRDLG---PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYVR 998
            P      Q   GG A+     +   + E   FE F        R+LH DP+V  V+ FFT +ECD Y+ MS   ++ + +  G+L P  L  + T    S+ + QRTSTTWFHHYA  PEL+A+A+ LLG+    ++EEPQTVRYR  E+F WHLDAL P     +S  GQR +T+LVYLT++ +  GGAT FRDLG   PL+VRPKKG  L+FFPS GG    PFD R LH GE VG+ +   EK+IAQLW  ++ Y P+ P GS H  A   I +Y +
Sbjct:  200 PAVSDDSQSRVGGAASSHDCSID--LNELPPFEQF--------RVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGALQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLPGISRFEEPQTVRYRRSEKFTWHLDALSPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGE-DAPNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEYCK 468          
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA)

HSP 1 Score: 218 bits (555), Expect = 8.390e-65
Identity = 118/238 (49.58%), Postives = 151/238 (63.45%), Query Frame = 3
Query:  303 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTEL-QSATTSSQF--QQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
            F   R+LH DP+V  V+ F T  ECD  +A++   K  +   + AP ++ QS T       + QRTSTTWFHHY   P+L+AKAS LLG+D+  +WEEPQTVRYR  E+F WHLDAL PS+  A  GGQR AT++VYL ++    GG+T FRDLG     PL+V PKKG  LVFFP+ GG    PFD R LHAGE V   ++  +K+IAQLW  +  Y P+ P G++H AA   I  Y
Sbjct:   26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANT-APMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261          
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.070e-63
Identity = 117/235 (49.79%), Postives = 150/235 (63.83%), Query Frame = 3
Query:  303 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTEL-QSATTSSQF--QQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPI 983
            F   R+LH DP++  ++ F TP ECD YI++++  K  +   + AP E+ QS T       + QRTSTTWFHHY     L+AKAS LLG+    +WEEPQTVRYR  E+F WHLDAL PSE     GGQR AT+LVYL ++    GG+T FRDLG     PL+V+PKKG  L+FFP+ GG    PFD R LHAGE V   +   +K+IAQLW  +  Y P+ P G+SHEAA + +
Sbjct:   57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPKYDKNANT-APMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIERWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSDESD-DDKWIAQLWLREHVYTPTAPPGNSHEAAVEAV 289          
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.480e-63
Identity = 118/238 (49.58%), Postives = 151/238 (63.45%), Query Frame = 3
Query:  303 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTEL-QSATTSSQF--QQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
            F   R+LH DP+V  V+ F T  ECD  +A++   K  +   + AP ++ QS T       + QRTSTTWFHHY   P+L+AKAS LLG+D+  +WEEPQTVRYR  E+F WHLDAL PS+  A  GGQR AT++VYL ++    GG+T FRDLG     PL+V PKKG  LVFFP+ GG    PFD R LHAGE V   ++  +K+IAQLW  +  Y P+ P G++H AA   I  Y
Sbjct:  123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANT-APMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 358          
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S2KB24_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KB24_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.230e-61
Identity = 120/255 (47.06%), Postives = 153/255 (60.00%), Query Frame = 3
Query:  303 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTS---------------SQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKG-GQRTATVLVYLTNMHANGGGATAFRDLG---------PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
            F   R+LH DP+V  ++ FFT +ECD Y+ +S   +  +   + A  E     T+               S+ + QRTSTTWFH+Y   PEL+AKAS LLG++   ++EEPQTVRYR  E+F WHLDAL P E     G GQR AT+LVYLT++ A  GGAT FRDLG         PL+VRPKKG  L+FFPS GG  G+PFD R LH GE V + +   EK+IAQLW  ++ Y P+ P G+SH  A   I  Y
Sbjct:  204 FEKFRVLHTDPMVLAIDDFFTNEECDKYVQISIDAEKQQTNSAAAGDETTQEETALQPMLLGQSQTVGKDSRSKAQRTSTTWFHYYKGVPELMAKASRLLGLEGIDRFEEPQTVRYRRNEKFTWHLDALSPEEANNPSGSGQRIATLLVYLTDVPAGSGGATMFRDLGGNNGAEDSQPLKVRPKKGSALLFFPSAGGIPGAPFDIRTLHCGEAVAE-DAENEKWIAQLWLRQRGYEPTAPVGNSHGDASDEIGRY 457          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGF5_9PHAE1.670e-22992.94Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A6H5L0Y5_9PHAE2.530e-7440.42Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
D7G1H9_ECTSI5.590e-7153.04Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2KCF3_9STRA6.060e-7150.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2UAB3_9STRA5.720e-6851.84Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K0SVE6_THAOC4.370e-6546.07Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S1ZRX7_9STRA8.390e-6549.58Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2N1B0_9STRA1.070e-6349.79Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S4QXQ4_9STRA1.480e-6349.58Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2KB24_9STRA2.230e-6147.06Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1264contigE-fasciculatus_F_contig1264:10969..14759 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score632.1
Seed ortholog evalue1.5e-178
Seed eggNOG ortholog2880.D8LRR7
EggNOG free text desc.procollagen-proline 4-dioxygenase activity
EggNOG OGsKOG1591@1,KOG1591@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1324
Cds size999
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1264.2022.1prot_E-fasciculatus_F_contig1264.2022.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1264 11001..14466 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927772.0296025-UTR-E-fasciculatus_F_contig1264:10968..110001622927772.0296025-UTR-E-fasciculatus_F_contig1264:10968..11000Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1264 10969..11000 +
1695995687.4647288-UTR-E-fasciculatus_F_contig1264:10968..110001695995687.4647288-UTR-E-fasciculatus_F_contig1264:10968..11000Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1264 10969..11000 +
1622927772.0935519-UTR-E-fasciculatus_F_contig1264:14466..147591622927772.0935519-UTR-E-fasciculatus_F_contig1264:14466..14759Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1264 14467..14759 +
1695995687.5161033-UTR-E-fasciculatus_F_contig1264:14466..147591695995687.5161033-UTR-E-fasciculatus_F_contig1264:14466..14759Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1264 14467..14759 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927772.0465577-CDS-E-fasciculatus_F_contig1264:11000..112161622927772.0465577-CDS-E-fasciculatus_F_contig1264:11000..11216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1264 11001..11216 +
1695995687.4781263-CDS-E-fasciculatus_F_contig1264:11000..112161695995687.4781263-CDS-E-fasciculatus_F_contig1264:11000..11216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1264 11001..11216 +
1622927772.059904-CDS-E-fasciculatus_F_contig1264:12741..131911622927772.059904-CDS-E-fasciculatus_F_contig1264:12741..13191Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1264 12742..13191 +
1695995687.4897306-CDS-E-fasciculatus_F_contig1264:12741..131911695995687.4897306-CDS-E-fasciculatus_F_contig1264:12741..13191Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1264 12742..13191 +
1622927772.0747087-CDS-E-fasciculatus_F_contig1264:14133..144661622927772.0747087-CDS-E-fasciculatus_F_contig1264:14133..14466Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1264 14134..14466 +
1695995687.499306-CDS-E-fasciculatus_F_contig1264:14133..144661695995687.499306-CDS-E-fasciculatus_F_contig1264:14133..14466Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1264 14134..14466 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1264.2022.1

>prot_E-fasciculatus_F_contig1264.2022.1 ID=prot_E-fasciculatus_F_contig1264.2022.1|Name=mRNA_E-fasciculatus_F_contig1264.2022.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=333bp
MQQGFGKQAQSKTPAKLKTPAKAPPPAVPKQTPVRAGELPEDAFSQFPPL
TPEQKQTLQKAPGGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHAD
PVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTSSQFQQ
QRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWH
LDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKK
GKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPY
PPSVPEGSSHEAAEKPIVDYVRRFAEAGVRPE*
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mRNA from alignment at E-fasciculatus_F_contig1264:10969..14759+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1264.2022.1 ID=mRNA_E-fasciculatus_F_contig1264.2022.1|Name=mRNA_E-fasciculatus_F_contig1264.2022.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3791bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1264:10969..14759+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTTTCCACCCAAATCATCAAGCGCGGTTGCGCATGCAGCAGGGCTTTGGT AAGCAAGCACAGAGCAAGACGCCAGCAAAGCTCAAGACGCCAGCAAAGGC ACCACCCCCGGCCGTTCCGAAACAGACTCCCGTGAGAGCAGGAGAACTGC CAGAAGATGCCTTCTCGCAGTTTCCGCCTTTGACCCCGGAGCAGAAGCAA ACCCTCCAGAAAGCTCCAGGGGGTAAGGCGACGGACTTCCCTGTCGAGGT GAGGATGCAACTAACTGCTGCTACTGCTATCATGTTGGCGGTACACACGA TACTTACGCAGTATGCAGCTTCGACCACGCCGCGTTTTACGAGCCCTCCA GTTTCCATCATGTTTTGGTTGGTATTATGGATAGCGTGGCAGACATGCGA TGCGAACTTGAAGTACAGGGGACAAAGAAACGTTCCGCCTGATCGAAACA TCCAAGTACCGCGGACCAGCGTTCAAATCTCACGTCGGGTCAGCCCAGGG CTCCGGTTGGTTCAGCCCAAGCCATAGGTTCATGTGTGGCCAACAATGGA CGACTTGCCCTTTGTCCAGATGTCTGCTGAAGTCATGTGTATGGCCTCAC GTCATTGGCCGCGATTTGTTGCGATGGCCAGTCTGTGCCTCTTGACTGCG TTTTCGACTTGTCACAATCAACAGCAGGTTGCAGGACAGGCCTAGACTAC AGCAGTATGCCGTTCACGAAAATAATCGTGATCTGAAGCCTTTCCGTTCA TGTCCGCGGCTCATGTGAGTTAGGTACAATGACGTGATATCGTTTTGCAA GACCTGCTGAAGGCAACGTGTGACCTCGTGGCGTTGATCCTTGTGGATGC CGACAATTTGGCGTGGCGCCTCTTCACTTTCCAAACTTGATCGCCTGTGG CATTGGATGGGACCCCCACACCCCCACCCACCCACCGCCATGATTCCAAT AAACACTGTTGTATTGCTAGGGCCCAGAGTTTGGCCTCTCACCCTTAACT TTGTGCCAAACGGCATTTCTGGTGAACAGGCTGTGGTTTCCGCTTAAGAA AACACCGCTTGTTGACTGTGTTGTGCAGTTCTTGAAGAGGTGAAGACCCA AATAGGATTCTCAGGAGAACTGTTGACAGTTCGGCCTCTACAGCAGTGAC GCAGCAACTGGTCGGCGCACCACTCGCACTGACCTACGGCAGTCTGAATC CCACCACAACGATGTCACAACGATGTCACAAGTTATGAAGGAGGTCCGAT TTTCGGAAGACGACTCGAAGACCTTCAATAGCTCCGATGGGGCGACTGCT TTGCGCACGTTTGCTCGCCACACTGCCCAGGAGGCGACTTCAAAGGCAGC AAAGGAGGGTGTCACAGGGAGCCGACTGAAAAAATGGGATAAGAGCCCGT CATGTTGCGGCTACAAGCGGGCACCAACTAGGAATGTTCATCTGAGCATG TGGCGGAGTACCCTGTCATGCCGCTCCAAATCTCGATTGTCCGTGTAACT CTTTGAAAATTATCGTTGTTCGATGCAGCGGGTTGACGTTTGTTCCCAGA CAACGTCCACATCCTGACGAGCGCATAGAGGTTTTTCAGCATGACGTGGC AGTCGTGACCCACACTCTGTTGACGTCTTCGAGTCGCCACCCCCGCCGAG CCAGTCCAATACTTCAGTATTTGCAAGCATTCACTTCGGAAAGGAAGAGA CCTTTTCGACACATGGTTTCATTCGTACCGCTGACGGCCGCACACCGCTG TGTCCTGTGTGCGCGCTCTCCAGGTGGTGGATCGGATTAGAGAACGGCAC GGCTTCGAGCACTTCGACGAAAAGCTCTTCCCGGGCATCCGTCTTCTACA CGCCGACCCCGTTGTGTTTGAAGTGGAGGGATTTTTTACGCCTCAAGAGT GCGATGCGTACATCGCGATGTCCACGTTGAAAAAATCGGGGCGGCGAAGG GGAAGCCTCGCGCCTACGGAGCTGCAAAGCGCAACTACTAGCTCCCAGTT CCAGCAGCAGCGGACGTCAACCACTTGGTTTCATCATTACGCGTCGGCCC CAGAGCTGGTGGCGAAGGCATCGTTGCTCTTGGGTGTAGACGACTACTGC AAGTGGGAAGAGCCTCAGACTGTCCGATACCGACCAGGCGAGAGATTCAA TTGGCACTTGGATGCGCTCCCTCCCAGCGAATGCGGAGCGAGCAAAGGGG GTCAACGAACGGCTACGGTCCTTGTGAGTACGCATACGTGGCATGAAGTG TCGCGCTTTCCCCCCGTTTCTCTCCCTCGGCATGGGGTTACCCAACCTCT CCCTGCTGGCTGGGTCTTTTCGGTATGTAGTCTCTAGCCTAAACACCTGT ACTGTTCGAGGGTCGCGTGTCTTCCTGGCTTATTCCATGTAGCCAACGGT AGTTATGAGAGATCGTGACTGGTAAGGGCATGGTTGGTCCGAACTAGGTG CCTGGATGGGGATCGAAATCTGCCAGTATATCCACTGGAAAAAGTTATGA TGTTGACAACTAGAACATGGCCGGCTGGCCTGACCTATACATCCAGGGCG TTCTCTTTCGTGTCTTTCAAGGTACGGATCCGAGTTTCCGTATTCACAAG CTTACCCATGGTCAGGAACACGCATAACACTTAATACCCAGGGAGAGTTC ACCGCTCGCGAAAACTAAGGATGTAAAAGTATTATAGTACAAACCGAACA AAAAATGCGAGACAGGACCGAAACGAGCCCAAAAAGGACTATAGCACTCT ATAAACTAATTCCATATGAGTTTCCATAAGACTTCCAGAGAGAGCTCATG AGAGCACCCTATCAGGGGAAGATGCAAGACTAGAGAAAGGCCATTCATCC GCATGCCGCCCAGGGAGACTCTGTTGCAGATAAATTAGTGACAGGTATCT TTGGAACGGGCCTTGGTTTGAGGGCCTCGCTGCCTCGCTCAGCAGCAATA CTTGTTTTCGACTCGTGTGGAAATGTCAACACGACCGGGCACTTCCACTC AACTTGCACTTGTAGAGAAGAAGAGATCGTGTCCGGGAGGGAAGCTATCT CGTATATTTACCGACAACTCGCTTGCGGTTGACAGTGTCGCACTTTTGGC ATGAGTGGACCAAGTTTAACACTGCCCTAATCTTCCGCCATGTTCCAAAA CGTTTGTTTACCCAGGTGTACTTGACAAATATGCACGCAAACGGCGGAGG GGCGACGGCATTTCGCGATCTGGGGCCTCTGCGTGTTCGGCCCAAGAAGG GAAAATGCTTGGTATTTTTCCCCTCGTTTGGGGGGGAGGCTGGCAGCCCC TTCGACAGCAGGGTTCTGCACGCGGGGGAGGTTGTGGGCCAAGGCAATAA GGCCAAAGAGAAGTATATTGCGCAGCTCTGGTGTCACAAGAAACCGTACC CGCCGTCGGTGCCTGAGGGATCTTCCCACGAGGCAGCCGAGAAACCGATT GTCGACTACGTAAGGCGTTTCGCGGAGGCAGGAGTGAGGCCGGAGTGATG CTGCTGCGCATTGAGCCCCCTGTGTTGCGTTTTGTGTTCAAGCGACGGGT GTAGCTAAGAACAACCGTACACCCGCTTATGCTTGTAATGAGCCGCGGAG CGAGCGAAGCGAGCGAACTTTTTTCCCTTCTTCTCCCAGGAGGGAAAAAA AGGCTCTATATATCGACCTGAGTTCCGCCGCGTGTTGTAGGGGCCCCTAA ACTTGATTTCCGTGAAGCCGGTTTTACGCACTTTTGGCACCAGAAACGAG ACCTACAGGGCACCAATTGACGATCTGTTAACTGCTGAGGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1264:10969..14759+

>mRNA_E-fasciculatus_F_contig1264.2022.1 ID=mRNA_E-fasciculatus_F_contig1264.2022.1|Name=mRNA_E-fasciculatus_F_contig1264.2022.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1998bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1264:10969..14759+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGCAGGGCTTTGGTAAGCAAGCACAGAGCAAGACGCCAGCAAAGCT
CAAGACGCCAGCAAAGGCACCACCCCCGGCCGTTCCGAAACAGACTCCCG
TGAGAGCAGGAGAACTGCCAGAAGATGCCTTCTCGCAGTTTCCGCCTTTG
ACCCCGGAGCAGAAGCAAACCCTCCAGAAAGCTCCAGGGGGTAAGGCGAC
GGACTTCCCTGTCGAGATGCAGCAGGGCTTTGGTAAGCAAGCACAGAGCA
AGACGCCAGCAAAGCTCAAGACGCCAGCAAAGGCACCACCCCCGGCCGTT
CCGAAACAGACTCCCGTGAGAGCAGGAGAACTGCCAGAAGATGCCTTCTC
GCAGTTTCCGCCTTTGACCCCGGAGCAGAAGCAAACCCTCCAGAAAGCTC
CAGGGGGTAAGGCGACGGACTTCCCTGTCGAGGTGGTGGATCGGATTAGA
GAACGGCACGGCTTCGAGCACTTCGACGAAAAGCTCTTCCCGGGCATCCG
TCTTCTACACGCCGACCCCGTTGTGTTTGAAGTGGAGGGATTTTTTACGC
CTCAAGAGTGCGATGCGTACATCGCGATGTCCACGTTGAAAAAATCGGGG
CGGCGAAGGGGAAGCCTCGCGCCTACGGAGCTGCAAAGCGCAACTACTAG
CTCCCAGTTCCAGCAGCAGCGGACGTCAACCACTTGGTTTCATCATTACG
CGTCGGCCCCAGAGCTGGTGGCGAAGGCATCGTTGCTCTTGGGTGTAGAC
GACTACTGCAAGTGGGAAGAGCCTCAGACTGTCCGATACCGACCAGGCGA
GAGATTCAATTGGCACTTGGATGCGCTCCCTCCCAGCGAATGCGGAGCGA
GCAAAGGGGGTCAACGAACGGCTACGGTCCTTGTGGTGGATCGGATTAGA
GAACGGCACGGCTTCGAGCACTTCGACGAAAAGCTCTTCCCGGGCATCCG
TCTTCTACACGCCGACCCCGTTGTGTTTGAAGTGGAGGGATTTTTTACGC
CTCAAGAGTGCGATGCGTACATCGCGATGTCCACGTTGAAAAAATCGGGG
CGGCGAAGGGGAAGCCTCGCGCCTACGGAGCTGCAAAGCGCAACTACTAG
CTCCCAGTTCCAGCAGCAGCGGACGTCAACCACTTGGTTTCATCATTACG
CGTCGGCCCCAGAGCTGGTGGCGAAGGCATCGTTGCTCTTGGGTGTAGAC
GACTACTGCAAGTGGGAAGAGCCTCAGACTGTCCGATACCGACCAGGCGA
GAGATTCAATTGGCACTTGGATGCGCTCCCTCCCAGCGAATGCGGAGCGA
GCAAAGGGGGTCAACGAACGGCTACGGTCCTTGTGTACTTGACAAATATG
CACGCAAACGGCGGAGGGGCGACGGCATTTCGCGATCTGGGGCCTCTGCG
TGTTCGGCCCAAGAAGGGAAAATGCTTGGTATTTTTCCCCTCGTTTGGGG
GGGAGGCTGGCAGCCCCTTCGACAGCAGGGTTCTGCACGCGGGGGAGGTT
GTGGGCCAAGGCAATAAGGCCAAAGAGAAGTATATTGCGCAGCTCTGGTG
TCACAAGAAACCGTACCCGCCGTCGGTGCCTGAGGGATCTTCCCACGAGG
CAGCCGAGAAACCGATTGTCGACTACGTAAGGCGTTTCGCGGAGGCAGGA
GTGAGGCCGGAGTGAGTGTACTTGACAAATATGCACGCAAACGGCGGAGG
GGCGACGGCATTTCGCGATCTGGGGCCTCTGCGTGTTCGGCCCAAGAAGG
GAAAATGCTTGGTATTTTTCCCCTCGTTTGGGGGGGAGGCTGGCAGCCCC
TTCGACAGCAGGGTTCTGCACGCGGGGGAGGTTGTGGGCCAAGGCAATAA
GGCCAAAGAGAAGTATATTGCGCAGCTCTGGTGTCACAAGAAACCGTACC
CGCCGTCGGTGCCTGAGGGATCTTCCCACGAGGCAGCCGAGAAACCGATT
GTCGACTACGTAAGGCGTTTCGCGGAGGCAGGAGTGAGGCCGGAGTGA
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