mRNA_E-fasciculatus_F_contig1264.2022.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE) HSP 1 Score: 640 bits (1652), Expect = 1.670e-229 Identity = 316/340 (92.94%), Postives = 322/340 (94.71%), Query Frame = 3
Query: 3 FHPNHQARLRMQQGFGKQAQSKTPAKLXXXXXXXPPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAPGGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTSSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYVRRFAEAGVR 1022
F+PN+QARLRMQQGFGKQ++S TPAKL PAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAP GKAT FPVEV DRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRR+G LAPTELQSATTSSQ QQ TSTTWFHHYASAPELVAKASLLLGVDDY KWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY RRFAEAGV+
Sbjct: 18 FNPNNQARLRMQQGFGKQSRSNTPAKLKTPAKAPYPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAPAGKATAFPVEVADRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQCQQXXTSTTWFHHYASAPELVAKASLLLGVDDYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYARRFAEAGVK 357
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 252 bits (644), Expect = 2.530e-74 Identity = 154/381 (40.42%), Postives = 197/381 (51.71%), Query Frame = 3
Query: 111 AVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQ-------------KAPGGKATDFPVEVVDRIRERHGFEHF-------------------------------------------------------DEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMST----------------LKKSGRRRGSLAPTELQSATTSSQFQQ--QRTSTTWFHHYASAPELVAKASLLLGVD-DYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
A P T R G+LP+D F+ FPPL+P+ +++ + G+ P +V++ IR RHG E F LFPG+RLLHA+P V V FFT +ECD YI+ S P +SAT + QRTSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ ASKGGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEVV G + ++K+IAQLW ++ Y P+VP+ + HE A + ++
Sbjct: 191 AAPAATAARGGQLPDDDFATFPPLSPDTLKSIMGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEF 570
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 237 bits (604), Expect = 5.590e-71 Identity = 131/247 (53.04%), Postives = 161/247 (65.18%), Query Frame = 3
Query: 300 LFPGIRLLHADPVVFEVEGFFTPQECDAYIAMST-------------LKKSGRRRGSLAPTELQSATTSSQFQQ--QRTSTTWFHHYASAPELVAKASLLLGVD-DYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
LFPG+RLLHA+P V V FFT +ECD YI+ S GS P +SAT + QRTSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ AS+GGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEVV G + ++K+IAQLW + Y P+VP+ + HE A + ++
Sbjct: 100 LFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGS-GPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEF 344
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 239 bits (611), Expect = 6.060e-71 Identity = 132/264 (50.00%), Postives = 168/264 (63.64%), Query Frame = 3
Query: 219 GGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTSSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGP-----LRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYV 995
G AT P+ VD + + F+ F R+LH DP+V V+ FFT +ECD YIAMS +G + G T + + + QRTSTTWFHHY + PEL+AK+S L G+DD +EEPQTVRY+P ++F WHLDAL P SKGGQRTAT+LVYLT++ GGAT FRDLGP L+V+PKKG L+FFP+ GG +PFD R LHAGEVV K+ +K+IAQLW + Y P+VP + H AA +PI YV
Sbjct: 183 GFSATATPMATVD-VSKLPPFDKF--------RVLHIDPLVIAVDDFFTHEECDKYIAMSD-PTAGNKDGDAVMTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLDDIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKS-DKWIAQLWLREDSYEPTVPPENVHAAATEPISQYV 435
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 233 bits (594), Expect = 5.720e-68 Identity = 127/245 (51.84%), Postives = 159/245 (64.90%), Query Frame = 3
Query: 297 KLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLK----KSGRRRGS-LAPTELQSATT---SSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
K F R+LH DP+V V+ FFTP+ECDA IA ST + + G+ L P ++ + T S+ + QRTSTTWFHHYA PEL+AKA L+G++D +EEPQTVRYR E F WHLDAL P+ A KGGQR AT+LVYLT++ GGAT FRDLG PL+VRPKKG L+FFP+ GG P D R LH GE V + ++K+IAQLW + PY P+ P G+SH +A PI DY
Sbjct: 233 KPFSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGINDISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVAS-DAEQDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 225 bits (574), Expect = 4.370e-65 Identity = 129/280 (46.07%), Postives = 168/280 (60.00%), Query Frame = 3
Query: 186 PEQKQTLQKAPGGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRR--GSLAPTELQSATT---SSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECG-ASKGGQRTATVLVYLTNMHANGGGATAFRDLG---PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYVR 998
P Q GG A+ + + E FE F R+LH DP+V V+ FFT +ECD Y+ MS ++ + + G+L P L + T S+ + QRTSTTWFHHYA PEL+A+A+ LLG+ ++EEPQTVRYR E+F WHLDAL P +S GQR +T+LVYLT++ + GGAT FRDLG PL+VRPKKG L+FFPS GG PFD R LH GE VG+ + EK+IAQLW ++ Y P+ P GS H A I +Y +
Sbjct: 200 PAVSDDSQSRVGGAASSHDCSID--LNELPPFEQF--------RVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGALQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLPGISRFEEPQTVRYRRSEKFTWHLDALSPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGE-DAPNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEYCK 468
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 218 bits (555), Expect = 8.390e-65 Identity = 118/238 (49.58%), Postives = 151/238 (63.45%), Query Frame = 3
Query: 303 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTEL-QSATTSSQF--QQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
F R+LH DP+V V+ F T ECD +A++ K + + AP ++ QS T + QRTSTTWFHHY P+L+AKAS LLG+D+ +WEEPQTVRYR E+F WHLDAL PS+ A GGQR AT++VYL ++ GG+T FRDLG PL+V PKKG LVFFP+ GG PFD R LHAGE V ++ +K+IAQLW + Y P+ P G++H AA I Y
Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANT-APMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.070e-63 Identity = 117/235 (49.79%), Postives = 150/235 (63.83%), Query Frame = 3
Query: 303 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTEL-QSATTSSQF--QQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPI 983
F R+LH DP++ ++ F TP ECD YI++++ K + + AP E+ QS T + QRTSTTWFHHY L+AKAS LLG+ +WEEPQTVRYR E+F WHLDAL PSE GGQR AT+LVYL ++ GG+T FRDLG PL+V+PKKG L+FFP+ GG PFD R LHAGE V + +K+IAQLW + Y P+ P G+SHEAA + +
Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPKYDKNANT-APMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIERWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSDESD-DDKWIAQLWLREHVYTPTAPPGNSHEAAVEAV 289
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.480e-63 Identity = 118/238 (49.58%), Postives = 151/238 (63.45%), Query Frame = 3
Query: 303 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTEL-QSATTSSQF--QQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
F R+LH DP+V V+ F T ECD +A++ K + + AP ++ QS T + QRTSTTWFHHY P+L+AKAS LLG+D+ +WEEPQTVRYR E+F WHLDAL PS+ A GGQR AT++VYL ++ GG+T FRDLG PL+V PKKG LVFFP+ GG PFD R LHAGE V ++ +K+IAQLW + Y P+ P G++H AA I Y
Sbjct: 123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANT-APMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 358
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Match: A0A7S2KB24_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KB24_9STRA) HSP 1 Score: 215 bits (548), Expect = 2.230e-61 Identity = 120/255 (47.06%), Postives = 153/255 (60.00%), Query Frame = 3
Query: 303 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTS---------------SQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKG-GQRTATVLVYLTNMHANGGGATAFRDLG---------PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 992
F R+LH DP+V ++ FFT +ECD Y+ +S + + + A E T+ S+ + QRTSTTWFH+Y PEL+AKAS LLG++ ++EEPQTVRYR E+F WHLDAL P E G GQR AT+LVYLT++ A GGAT FRDLG PL+VRPKKG L+FFPS GG G+PFD R LH GE V + + EK+IAQLW ++ Y P+ P G+SH A I Y
Sbjct: 204 FEKFRVLHTDPMVLAIDDFFTNEECDKYVQISIDAEKQQTNSAAAGDETTQEETALQPMLLGQSQTVGKDSRSKAQRTSTTWFHYYKGVPELMAKASRLLGLEGIDRFEEPQTVRYRRNEKFTWHLDALSPEEANNPSGSGQRIATLLVYLTDVPAGSGGATMFRDLGGNNGAEDSQPLKVRPKKGSALLFFPSAGGIPGAPFDIRTLHCGEAVAE-DAENEKWIAQLWLRQRGYEPTAPVGNSHGDASDEIGRY 457 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1264.2022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1264.2022.1 >prot_E-fasciculatus_F_contig1264.2022.1 ID=prot_E-fasciculatus_F_contig1264.2022.1|Name=mRNA_E-fasciculatus_F_contig1264.2022.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=333bp MQQGFGKQAQSKTPAKLKTPAKAPPPAVPKQTPVRAGELPEDAFSQFPPLback to top mRNA from alignment at E-fasciculatus_F_contig1264:10969..14759+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1264.2022.1 ID=mRNA_E-fasciculatus_F_contig1264.2022.1|Name=mRNA_E-fasciculatus_F_contig1264.2022.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3791bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1264:10969..14759+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1264:10969..14759+ >mRNA_E-fasciculatus_F_contig1264.2022.1 ID=mRNA_E-fasciculatus_F_contig1264.2022.1|Name=mRNA_E-fasciculatus_F_contig1264.2022.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1998bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1264:10969..14759+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |