mRNA_E-fasciculatus_F_contig12621.2011.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12621.2011.1
Unique NamemRNA_E-fasciculatus_F_contig12621.2011.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: D8LGF8_ECTSI (OSJNBa0029H02.30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF8_ECTSI)

HSP 1 Score: 624 bits (1610), Expect = 1.110e-223
Identity = 299/307 (97.39%), Postives = 301/307 (98.05%), Query Frame = 1
Query:    1 STIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSEWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKAWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKTAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEGTV 921
            STIPMQNLTAPGDWNRQN ALKHFNWSEGCFNFHFIDQDTTDGGLS+WEDYQAYRRVLGAIGVVHFPSCEGG ADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIK WRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSK AKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALL+DMAKDKELERAGQEGSSTWTVLAE  V
Sbjct:   44 STIPMQNLTAPGDWNRQNSALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGRADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLKDMAKDKELERAGQEGSSTWTVLAEAVV 350          
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE)

HSP 1 Score: 621 bits (1602), Expect = 1.630e-206
Identity = 302/321 (94.08%), Postives = 303/321 (94.39%), Query Frame = 1
Query:    1 STIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSEWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKAWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKTAKRRVGRLHKWIGDTCLLLGSPK--------------DALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEGTV 921
            STIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLS+WEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIK WRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSK AKRRVGRLHKWIGDTCLLLGSPK              DALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAE  V
Sbjct:   44 STIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKCLSVCVLSLLLRPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVV 364          
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: A0A835ZHG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHG4_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.100e-69
Identity = 129/324 (39.81%), Postives = 173/324 (53.40%), Query Frame = 1
Query:    1 STIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSEWEDYQAYRRVLGAIGVVHFPSCEGGH-----ADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKAWRSSASPPSAA------------GRAVAVLRGNNDAAPPLTSWYEREE----------------------------VLSDSKTAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALL 837
            S +PMQ+LTAPGDW RQN   +HF+W+EG F+FHF++  TTDGGLSEW DYQA+RRV  A+G+VH PSC  G      AD   L+ +    VA Y H    R+F F HSFE G  P   D  RDI+ PPE E EGG       +A  L+++AV++I  +   ++A+ ++ S   A             G       G + A PPL S  + ++                              +D   A+RR GRL KW+GD  LL G+PKDA+E Y  + +E  A  DPLWHAG LEG+AA L A++D + PT    +   L+
Sbjct:   42 SAVPMQDLTAPGDWTRQNCPFRHFSWTEGAFHFHFVEDGTTDGGLSEWGDYQAHRRVYVALGIVHEPSCRRGDGDKIGADLSLLQAELALAVAPYPHATLQRIFVFEHSFEAGSIPGY-DANRDIILPPEPEGEGGAELLRRFLAEPLHNIAVALITQIEGWVRAYAAALSGGVAGKLSQYMASARGGGXXXXXXAGGDGALPPLRSPLDTDDDNPLANMGASSASLMSAASAVSLTGGGGKAADRARARRRWGRLRKWLGDLALLAGTPKDAVELYDAAAAEL-AKADPLWHAGALEGFAAALVALADDETPTAVPPEIFKLI 363          
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: A0A176VZU1_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VZU1_MARPO)

HSP 1 Score: 101 bits (251), Expect = 4.390e-20
Identity = 79/245 (32.24%), Postives = 110/245 (44.90%), Query Frame = 1
Query:   49 QNGALKHFNWSEGCFNFHFIDQDTTDGGL--SEWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKAWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKTAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACL 777
            Q       +W  G   F F+      GG   S WED+QA R+ LG IG++H P+      D       F  +   Y      R FA   +  Q +  D    Q  ++FPP+++        E H+   + D A S++       ++W   A P        A+L    D+   L S    EEV   SK  KRR+GR+ K IGD CLL GSP DA  HYS ++   + + D LWHAG +EG  + L
Sbjct:   54 QKSPFAQQSWDTGSLCFKFLV-----GGAPRSPWEDFQANRKCLGVIGLMHCPTTP----DIGAAYDHFMAICRAYPSAQEKRCFALYPTDGQVEL-DEKKRQHLVMFPPDRQM------LEYHLQTLMQDFAASLLMAF----ESWVLHAEP------VGAILTTPLDSQASLNS----EEV---SKAKKRRLGRVQKTIGDYCLLAGSPVDANAHYSTAIDLARLTGDLLWHAGAIEGSVSAL 265          
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: A0A7S2RQA9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RQA9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.580e-19
Identity = 79/282 (28.01%), Postives = 130/282 (46.10%), Query Frame = 1
Query:    1 STIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQ-----DTTDGGLSEWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPD----ILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKAW-----------RSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEV---LSDSKTAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACL 777
            STI +Q +T    ++      +  NW EG   F+F+ Q     D+       W + QA+++ +  IG+   P+     +D +     F ++VA Y     +R  AF  +  Q +  +    +L    DI FPPE+  E G ++ + HM V L ++A +++++  A +K             RSS +      R    +  N D      ++   E +   L++SKT KR++GRL  WIG   LL GSP+DAL  +++S+     + D  W    LEG A  L
Sbjct:   36 STISLQQVTPFPGYSTSTSCFEFQNWQEGELRFNFVVQPEEVEDSQTLHHLGWHNLQAHKKCVAIIGICDCPNT----SDLRASLDDFQKLVAKYPEGTVSRWCAFNMTDSQLEDEECLKHLLSNGMDI-FPPEKLLEEGRTSFDYHMEVVLTNMASTLLEHFEAIVKEGLKNIALVENTKRSSQNEGDTRSR----VDSNIDILLHGATYAGDEAIAASLNESKTKKRKIGRLEAWIGGYSLLAGSPRDALNFFNRSILNCATNGDIAWQGVALEGSACAL 308          
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: UPI001CB9887D (trafficking protein particle complex II-specific subunit 120 homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9887D)

HSP 1 Score: 94.7 bits (234), Expect = 7.180e-18
Identity = 71/223 (31.84%), Postives = 104/223 (46.64%), Query Frame = 1
Query:  142 WEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRD-----IVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKAWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKTAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDA 795
            WED+ AYR++ G IG+ H PS      D   +  QF      +     +R FAF  +  Q      L+ +R+     ++FPP  +        E H+   + D+A S++     + + W   A     +GR +  L+   D+   L+S    EE +   K  KR+  R  K IGD CLL GSP DA  HYS ++  T+ + D  W+AG LEG   C   MS A
Sbjct:   83 WEDFHAYRKIHGVIGICHCPSSP----DLDSVAVQFGLACKEFPSSLVSRCFAFSPADSQ------LEGERNKGNKLVLFPPSNQ-----RAQEFHLQTMMQDIAASLLM----EFEKWVVEAE----SGRTL--LKTPLDSQASLSS----EEAI---KAKKRKNARAQKAIGDYCLLAGSPLDATSHYSTALELTRMTGDYFWYAGALEG-GVCAFLMSKA 272          
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: D8SAV7_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SAV7_SELML)

HSP 1 Score: 93.2 bits (230), Expect = 2.340e-17
Identity = 75/252 (29.76%), Postives = 114/252 (45.24%), Query Frame = 1
Query:   76 WSEGCFNFHFIDQDTTDGGLSEWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQG---DYPDILDP--------------------QRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKAWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKTAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEG 762
            W  GC  F F+         S+WED+QA+R+V G IGV+H P      AD     ++F ++   Y      R FAF  + EQ     + +++D                     Q+ ++FPP  +        + H+   ++D A SI+        A+ S        G   A L    D+   L+S    EEV   SK  +RR+ R+ K +GD  LL GSP DA+ HY+ +M  ++ + D LW+AG +EG
Sbjct:   63 WENGCLRFQFV---IGRANRSQWEDFQAHRKVHGCIGVLHCPDV----ADLDAAYEKFVEICNEYPAAQTRRCFAFSPTQEQALLLFFLELMDSFNLHFIFLAYRRVEQDDKKRQQMVLFPPVDK-----QMLKHHVGTLMHDFAASILM-------AFESRVLLAEPMG---ATLTTPMDSHVSLSS----EEV---SKAKRRRLERVQKTMGDYSLLAGSPADAISHYNTAMELSRHTGDSLWNAGEIEG 285          
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: A0A0D2X4E8_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X4E8_CAPO3)

HSP 1 Score: 75.5 bits (184), Expect = 2.100e-11
Identity = 64/235 (27.23%), Postives = 104/235 (44.26%), Query Frame = 1
Query:  127 GGLSEWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKAWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSK----TAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGD 819
            G   E  D+   +R L   G+++   C+    D +   ++F    + +  V   R FAF     Q D       ++ ++  P Q  E      + +++  L D+ +S++  LAA              A  +    R +    P L    ER   + D++      K+ VGR  K  GD CLL+GSP DA+ HY++++ +TK++ D L+ AGCLE +AA L        P V  D
Sbjct:  268 GFNDELIDFHFSKRTLVIFGIIN---CQHT-VDLRLAYREFQAACSQFPTVLDVRCFAFEPQDAQEDN------EKHVILIPNQAREH----VQFYISTILNDMTLSLVHLLAA--------------AHHSKIAERDDKKLLPSLL--LERTGGIDDARFYNANRKKIVGRFEKLAGDICLLVGSPDDAIVHYTEAIEQTKSANDWLYLAGCLECFAATLLVKHKMGDPLVLSD 472          
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: A0A1X6P8K3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8K3_PORUM)

HSP 1 Score: 75.1 bits (183), Expect = 3.000e-11
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  580 REEVLSDSKTAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLS 780
            R+ V   SK AKRR+GRL KW+GD  LL+GSP DAL  Y+ ++  ++A++D LW AG  EG AA L+
Sbjct:  503 RQTVDKQSKLAKRRLGRLDKWLGDYFLLIGSPSDALTKYNSAVERSRANSDRLWLAGATEGAAAALA 569          
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Match: A0A4D9D6X0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6X0_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.680e-10
Identity = 53/182 (29.12%), Postives = 79/182 (43.41%), Query Frame = 1
Query:  358 IVFPPEQE-FEGGGSTTELHMAVSLYDVAVSIIKNLAADIKAWRSSASPP------------------------------------SAAGRAVAVLRGNNDAA--PPLTSWYEREEVLSDSKTAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAM 786
            ++FPPE +  E G S  E HM V L D+AV ++  L A++   ++                                            G+ +A LR   D    P L    +      +        GR  KW+GD CLL G+P+DALE Y+Q+++E KA+ +PLW AG LEG+ A +  +
Sbjct:  177 VIFPPEGDPKERGVSMVEAHMGVMLSDLAVVVLSRLEAEVAGAKAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKGTGLAKRGGQWLAQLRSPADGGGGPRLARGGQAGGQHVELGGGGGDRGRWGKWVGDLCLLAGTPQDALEAYAQALAECKAAGEPLWQAGALEGWIASVGVL 358          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12621.2011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LGF8_ECTSI1.110e-22397.39OSJNBa0029H02.30 n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5J9H9_9PHAE1.630e-20694.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHG4_9STRA1.100e-6939.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A176VZU1_MARPO4.390e-2032.24Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A7S2RQA9_9STRA6.580e-1928.01Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
UPI001CB9887D7.180e-1831.84trafficking protein particle complex II-specific s... [more]
D8SAV7_SELML2.340e-1729.76Uncharacterized protein n=4 Tax=Selaginella moelle... [more]
A0A0D2X4E8_CAPO32.100e-1127.23Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A1X6P8K3_PORUM3.000e-1152.24Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A4D9D6X0_9STRA3.680e-1029.12Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12621contigE-fasciculatus_F_contig12621:701..3860 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score619.8
Seed ortholog evalue6.9e-175
Seed eggNOG ortholog2880.D8LGF8
Preferred nameTRAPPC9
KEGG koko:K20306
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000278,GO:0000280,GO:0000281,GO:0000910,GO:0000911,GO:0000916,GO:0000919,GO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005801,GO:0005802,GO:0005829,GO:0005886,GO:0006355,GO:0006810,GO:0006886,GO:0006888,GO:0006891,GO:0006892,GO:0006893,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007107,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016482,GO:0017016,GO:0017112,GO:0017137,GO:0019219,GO:0019222,GO:0019899,GO:0019953,GO:0021537,GO:0021543,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030008,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030427,GO:0030865,GO:0030866,GO:0030900,GO:0031032,GO:0031267,GO:0031323,GO:0031326,GO:0031410,GO:0031982,GO:0031984,GO:0032153,GO:0032154,GO:0032155,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032991,GO:0033036,GO:0033206,GO:0034498,GO:0034613,GO:0035838,GO:0036063,GO:0036213,GO:0042147,GO:0042886,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044837,GO:0045184,GO:0046907,GO:0048137,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048232,GO:0048285,GO:0048513,GO:0048518,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0051020,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051286,GO:0051301,GO:0051321,GO:0051336,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0060255,GO:0060322,GO:0061024,GO:0061640,GO:0061796,GO:0061982,GO:0061983,GO:0065003,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090114,GO:0097708,GO:0098590,GO:0098772,GO:0098791,GO:0098876,GO:0099023,GO:0140013,GO:1902410,GO:1903046,GO:1903047,GO:1903506,GO:1990071,GO:2000112,GO:2001141
EggNOG free text desc.cell plate assembly
EggNOG OGsKOG1953@1,KOG1953@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-16_003880.1
Exons5
Model size921
Cds size909
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12621.2011.1prot_E-fasciculatus_F_contig12621.2011.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12621 701..3848 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927770.7828841-CDS-E-fasciculatus_F_contig12621:700..9431622927770.7828841-CDS-E-fasciculatus_F_contig12621:700..943Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 701..943 -
1695995686.8063917-CDS-E-fasciculatus_F_contig12621:700..9431695995686.8063917-CDS-E-fasciculatus_F_contig12621:700..943Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 701..943 -
1622927770.7991982-CDS-E-fasciculatus_F_contig12621:1490..16021622927770.7991982-CDS-E-fasciculatus_F_contig12621:1490..1602Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 1491..1602 -
1695995686.8215208-CDS-E-fasciculatus_F_contig12621:1490..16021695995686.8215208-CDS-E-fasciculatus_F_contig12621:1490..1602Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 1491..1602 -
1622927770.811597-CDS-E-fasciculatus_F_contig12621:1956..21351622927770.811597-CDS-E-fasciculatus_F_contig12621:1956..2135Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 1957..2135 -
1695995686.8369536-CDS-E-fasciculatus_F_contig12621:1956..21351695995686.8369536-CDS-E-fasciculatus_F_contig12621:1956..2135Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 1957..2135 -
1622927770.8278086-CDS-E-fasciculatus_F_contig12621:2464..26941622927770.8278086-CDS-E-fasciculatus_F_contig12621:2464..2694Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 2465..2694 -
1695995686.8474848-CDS-E-fasciculatus_F_contig12621:2464..26941695995686.8474848-CDS-E-fasciculatus_F_contig12621:2464..2694Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 2465..2694 -
1622927770.852174-CDS-E-fasciculatus_F_contig12621:3703..38481622927770.852174-CDS-E-fasciculatus_F_contig12621:3703..3848Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 3704..3848 -
1695995686.8575237-CDS-E-fasciculatus_F_contig12621:3703..38481695995686.8575237-CDS-E-fasciculatus_F_contig12621:3703..3848Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12621 3704..3848 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927770.8680117-UTR-E-fasciculatus_F_contig12621:3848..38601622927770.8680117-UTR-E-fasciculatus_F_contig12621:3848..3860Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12621 3849..3860 -
1695995686.8675256-UTR-E-fasciculatus_F_contig12621:3848..38601695995686.8675256-UTR-E-fasciculatus_F_contig12621:3848..3860Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12621 3849..3860 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12621.2011.1

>prot_E-fasciculatus_F_contig12621.2011.1 ID=prot_E-fasciculatus_F_contig12621.2011.1|Name=mRNA_E-fasciculatus_F_contig12621.2011.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=303bp
MQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSEWEDYQAY
RRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHS
FEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNL
AADIKAWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKTA
KRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEG
YAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAE
GTV
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mRNA from alignment at E-fasciculatus_F_contig12621:701..3860-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12621.2011.1 ID=mRNA_E-fasciculatus_F_contig12621.2011.1|Name=mRNA_E-fasciculatus_F_contig12621.2011.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3160bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12621:701..3860- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGCACGATCCCGATGCAGAACCTGACTGCACCGGGGGACTGGAACCGTCA AAACGGCGCCCTGAAACACTTCAACTGGTCGGAGGGGTGCTTCAACTTCC ACTTCATCGACCAGGACACCACCGACGGGGGCCTCAGCGAGTGGGAAGAC TATCAGGGTATGTACGAATGCACATGAAACTAAGATGCTGCAGATTTCTA GATTTTCTTTTTTGGTTCTCTGGGTAGTTCGAGTCAAAAGCGCGTCAGCT GTGTGAGCTGTTGAGCCTGGGAAACGTCATACCGCAGCTGGCAGCCAGCT GTGGGTTGGTCCTGCCCGCGTGCCTTCCTTCGCATCTTGCATCACAGTCC CTCGTGTGTACTAATTTTGTATTAGGGAGGTAAAGAGACGATCAGGGTAC ATGTGCACTTGTATGAAGGGAGATACCAGAGAGTATCCAGGGTACACATG TACTTGTATGAGGGGAGAAGCGTCCTACTGCATTTCACCCTTGGGTGCGC TCAGGGTACGTACTTTTATTAGGGAGATAGATGTGTGGCATCGCTCTGCA CCAGTTGTTATTTGCAGATTCACAATACAATATTTCTTTCATACACACCT GTACGATACATGGTCATCGTCAACGCTCGCGTCATCGTCAACACTCGCTT CCTCGTCTACCTGGCGTGAGAGTCTTGCCTGTCCAACTGAGCACAGCTCC GATCCGGGGTCCCAGAGTTTCAGGCCAAGGGGAATCGGCGCCTGAGACCC AACCAGCACGCCTGTCCAAAGCGATCAGTCCTCTGCCGAAAGTCCCAACC GGAGCCGACTTTTTGTCGGGTTTCCCGAACGCCCTTTCTATCCTACCGTA GAAGCAAAATGGCTGCCGTGGTGGCGCGAAGGGTCGGTTGCTATCGGCCG TGCACAGAGAGCATGGCTCCTCCAAACCCTGTCCTCCCTCGCCACCATCT CACTAAAGCCCGGCCCCCCATGTCATTGACTTGAAATCCCCCACCCAACC CTACCCCCGGCGCCAAACATGAAGAACCGACAAATCTACCGACGAGTGCT CAAGGCGATCGGGGTGGTGCACCCCCCTTCGTTCGACGGGAGTGACGCGG ACTTGAAATAGCTTAACGTCCCCCAACCCCACCCTACCCCCCGCCCCAAA CATGACAACCGAAAAGCCTACCGACGAGTGCTTGGAGCGATCGGGGTGGT GCACTTCCCTTCGTGCGAGGGGGGCCATGCGGACTTCAAGGAGCTCGAGA AGCAGTTCAACCAGGTGGTGGCCGGCTACAAGCACGTGCACGCGACGCGG ATGTTCGCGTTCGGGCACTCTTTCGAGCAGGGCGACTATCCCGACATCCT CGACCCTCAGCGGGACATCGTTTTCCCCCCGGAGCAAGAGTTCGAGGTGC AGTGGGGGTGTTTGGTTGGCGTCGACAATGTTGTTTTTGTTGGTGTTGGT GTTTGTGCTGGAGGTGATATGGCGCTTCCCCCCCTCGGAGCAAGAGTTTG AGGTGCGCGTGCTTGATTGGCGCCCACGATGTTTAAGCGAGCAAACACTC CATCACGCCTGAACCTTTGTGAAAATAGCGGTTCTAAAACATAGTGAATA TCCTCCTTGTTGCTGTCAAGGAATCCCGCTTGTGTTTTTGTTTTTGAGTA AGCCAAATGCTTTTTGGACACGGCGGTTTTATTCTTCCTGGACAACTTGT TTTTTTTTTGGCGTTTTGTCGTCAGGGTGGAGGGAGCACGACGGAGCTGC ACATGGCCGTTAGCCTGTACGACGTGGCCGTCTCCATCATCAAGAACCTC GCCGCCGACATCAAGGCGTGGAGGTCTTCGGCCTCCCCCCCCTCCGCCGC GGGCAGAGCCGTGGCCGTGCTCCGGGGAAACAACGATGCGGCGCCGCCCC TCACGTAGGCACACATCTGATATATTGTTATTGTTGCTGTTGGTGGTGGT GGTGTTGGTCCCGTACTCGACGCCCTTTACAAGTAGTTTTATTGCGAGAA GAATTCGGCGCATTCCGTCCTCCAAGTGCGGCCAGTCCAAACGGCACTAA ATGAGAGGGCACCCATAGCATTTGTGGATTTTCGATTTGATTTTTTAAAA AAGTGCGATGCTGTTCAAGAGTCCACACCGTTCCAAGCGTTGTGGGCCAA CACATACATGAACCAGCTGCCAAGCCGATCTACACGAACACGACAACAAC AAATCCGACTGCGAGCCAACCCACACTAAAACGATGATGACGACGTCGGC GATGGCAGGTCGTGGTACGAGCGAGAGGAGGTGCTGAGCGACAGCAAGAC CGCCAAGCGAAGAGTAGGGCGCCTGCACAAGTGGATCGGCGACACCTGCC TCCTTCTCGGCTCGCCTAAGGTCCGTCCGCCCGTCCGCCCGTTTCTCTGT CGTTTTTTATTTGCTCTTGATTTTATCCTTGAATTAGACCCACTACGTGG AAAACGTATGGGTGTGTGTTTGATCTTGTGGTGCGTCTATGGGTGTTAAC CTAGCCAAGAAGGTCCATCCGTCTGTCTGCTTTCCCTGTAACTCTGAACT CTCTTTTTCATTGACCCACGTATGTGTGGGTGGTGGGCCTTGATGTTGTA GTACGTCTTTTTTTGCGGGTGTTACCTAAGCACAGCAACTCCTTGATGTG CGTCCACACACAGCGTGCCTGTAGCTACGCACACGCTGCATCGCCCCTCT GCTTTTTTTTACTCTCTGGAGATTTATTTTGTTAGACCCACGTAGTATGG GTGTGGGCTTTGATGTTGTGGCACGTCTACCGGGTGTTGCCTACCCACGG CAGCTCTCTGGTGTGCGTTCACACACGCGAGTCGATCAGTCGGCCCGCCG AGGGCGACGAAGATCACGAACATGATCGCTCTCTTCCAATATCTCTTCTC TGCTCCTCCGCCCCAAGGACGCCCTGGAGCACTACAGCCAGTCCATGTCC GAGACCAAGGCGTCCACGGACCCCCTCTGGCACGCCGGCTGCCTGGAGGG CTACGCCGCCTGCCTGTCGGCCATGAGTGACGCCGACCACCCGACGGTAC ACGGGGACCAGGCGCTGGCCCTGCTGAGGGACATGGCGAAGGACAAGGAG CTGGAGCGGGCTGGCCAGGAGGGTTCTTCGACCTGGACCGTGCTCGCGGA AGGTACTGTC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12621:701..3860-

>mRNA_E-fasciculatus_F_contig12621.2011.1 ID=mRNA_E-fasciculatus_F_contig12621.2011.1|Name=mRNA_E-fasciculatus_F_contig12621.2011.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1818bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12621:701..3860- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGAACCTGACTGCACCGGGGGACTGGAACCGTCAAAACGGCGCCCT
GAAACACTTCAACTGGTCGGAGGGGTGCTTCAACTTCCACTTCATCGACC
AGGACACCACCGACGGGGGCCTCAGCGAGTGGGAAGACTATCAGGATGCA
GAACCTGACTGCACCGGGGGACTGGAACCGTCAAAACGGCGCCCTGAAAC
ACTTCAACTGGTCGGAGGGGTGCTTCAACTTCCACTTCATCGACCAGGAC
ACCACCGACGGGGGCCTCAGCGAGTGGGAAGACTATCAGGCCTACCGACG
AGTGCTTGGAGCGATCGGGGTGGTGCACTTCCCTTCGTGCGAGGGGGGCC
ATGCGGACTTCAAGGAGCTCGAGAAGCAGTTCAACCAGGTGGTGGCCGGC
TACAAGCACGTGCACGCGACGCGGATGTTCGCGTTCGGGCACTCTTTCGA
GCAGGGCGACTATCCCGACATCCTCGACCCTCAGCGGGACATCGTTTTCC
CCCCGGAGCAAGAGTTCGAGCCTACCGACGAGTGCTTGGAGCGATCGGGG
TGGTGCACTTCCCTTCGTGCGAGGGGGGCCATGCGGACTTCAAGGAGCTC
GAGAAGCAGTTCAACCAGGTGGTGGCCGGCTACAAGCACGTGCACGCGAC
GCGGATGTTCGCGTTCGGGCACTCTTTCGAGCAGGGCGACTATCCCGACA
TCCTCGACCCTCAGCGGGACATCGTTTTCCCCCCGGAGCAAGAGTTCGAG
GGTGGAGGGAGCACGACGGAGCTGCACATGGCCGTTAGCCTGTACGACGT
GGCCGTCTCCATCATCAAGAACCTCGCCGCCGACATCAAGGCGTGGAGGT
CTTCGGCCTCCCCCCCCTCCGCCGCGGGCAGAGCCGTGGCCGTGCTCCGG
GGAAACAACGATGCGGCGCCGCCCCTCACGGTGGAGGGAGCACGACGGAG
CTGCACATGGCCGTTAGCCTGTACGACGTGGCCGTCTCCATCATCAAGAA
CCTCGCCGCCGACATCAAGGCGTGGAGGTCTTCGGCCTCCCCCCCCTCCG
CCGCGGGCAGAGCCGTGGCCGTGCTCCGGGGAAACAACGATGCGGCGCCG
CCCCTCACGTCGTGGTACGAGCGAGAGGAGGTGCTGAGCGACAGCAAGAC
CGCCAAGCGAAGAGTAGGGCGCCTGCACAAGTGGATCGGCGACACCTGCC
TCCTTCTCGGCTCGCCTAAGGTCGTGGTACGAGCGAGAGGAGGTGCTGAG
CGACAGCAAGACCGCCAAGCGAAGAGTAGGGCGCCTGCACAAGTGGATCG
GCGACACCTGCCTCCTTCTCGGCTCGCCTAAGGACGCCCTGGAGCACTAC
AGCCAGTCCATGTCCGAGACCAAGGCGTCCACGGACCCCCTCTGGCACGC
CGGCTGCCTGGAGGGCTACGCCGCCTGCCTGTCGGCCATGAGTGACGCCG
ACCACCCGACGGTACACGGGGACCAGGCGCTGGCCCTGCTGAGGGACATG
GCGAAGGACAAGGAGCTGGAGCGGGCTGGCCAGGAGGGTTCTTCGACCTG
GACCGTGCTCGCGGAAGGTACTGTCGACGCCCTGGAGCACTACAGCCAGT
CCATGTCCGAGACCAAGGCGTCCACGGACCCCCTCTGGCACGCCGGCTGC
CTGGAGGGCTACGCCGCCTGCCTGTCGGCCATGAGTGACGCCGACCACCC
GACGGTACACGGGGACCAGGCGCTGGCCCTGCTGAGGGACATGGCGAAGG
ACAAGGAGCTGGAGCGGGCTGGCCAGGAGGGTTCTTCGACCTGGACCGTG
CTCGCGGAAGGTACTGTC
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