prot_E-fasciculatus_F_contig12609.2002.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12609.2002.1
Unique Nameprot_E-fasciculatus_F_contig12609.2002.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length78
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12609.2002.1 vs. uniprot
Match: A0A6H5JZC1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZC1_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 5.800e-41
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = 0 
Query:    1 LPNSIVTFPLFELQANAVAAAIVGRGPFPSLAEREQWLRGEEGRLREGGVGPSSRGAHVLGGRQWEYLRRLLRIASGP 78
            LP SIVTFPLFELQANAVAAAIVGR  FPSLAEREQWLRGEE RLREGGVGPSSRGAHVLGGRQWEYLRRLLRIASGP
Sbjct:  386 LPQSIVTFPLFELQANAVAAAIVGRAAFPSLAEREQWLRGEEDRLREGGVGPSSRGAHVLGGRQWEYLRRLLRIASGP 463
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BLAST of mRNA_E-fasciculatus_F_contig12609.2002.1 vs. uniprot
Match: A0A6H5JY81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY81_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 3.080e-37
Identity = 65/77 (84.42%), Postives = 68/77 (88.31%), Query Frame = 0 
Query:    2 PNSIVTFPLFELQANAVAAAIVGRGPFPSLAEREQWLRGEEGRLREGGVGPSSRGAHVLGGRQWEYLRRLLRIASGP 78
            PNS   FPLFELQANAVAAAIVG   FPSLAEREQWLRG+E R+REG VGPSS GAH+LGGRQWEYLRRLLRIASGP
Sbjct:  146 PNSAAPFPLFELQANAVAAAIVGWASFPSLAEREQWLRGDEDRIREGAVGPSSPGAHLLGGRQWEYLRRLLRIASGP 222
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BLAST of mRNA_E-fasciculatus_F_contig12609.2002.1 vs. uniprot
Match: A0A7S2UCG3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCG3_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 9.050e-7
Identity = 30/78 (38.46%), Postives = 40/78 (51.28%), Query Frame = 0 
Query:    1 LPNSIVTFPLFELQANAVAAAIVGRGPFPSLAEREQWLRGEEGRLREGGVGPSSR--GAHVLGGRQWEYLRRLLRIAS 76
            LP+S+V FP FELQA A+ A   G  P P L   ++ L   +     GG     R    H LG  QW+Y R++ R+A 
Sbjct:  152 LPHSVVPFPAFELQAEAIVAQYTGSAPEP-LPPLDERLERAKADAESGGPNDPGRIIDTHYLGSHQWDYCRKMARMAG 228
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BLAST of mRNA_E-fasciculatus_F_contig12609.2002.1 vs. uniprot
Match: B7FZD6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZD6_PHATC)

HSP 1 Score: 50.8 bits (120), Expect = 1.720e-5
Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 0 
Query:    1 LPNSIVTFPLFELQANAVAAAIVGR-GPFPSLAEREQW-----LRGEEGRLREGGVGPSSRGAHVLGGRQWEYLRRLLRIAS 76
            LP+S++ FPLFELQA AV ++        P  + R+Q      + G EG++ +G V   S   H LG  QW+Y RRL   A 
Sbjct:  332 LPHSVIPFPLFELQAEAVWSSWTNSPSVLPDQSARQQHAEEAAVSGGEGKVDDGRVPQDS---HYLGSAQWDYCRRLASYAD 410
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12609.2002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JZC1_9PHAE5.800e-4194.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY81_9PHAE3.080e-3784.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UCG3_9STRA9.050e-738.46Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B7FZD6_PHATC1.720e-539.02Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 1..77
e-value: 4.2E-8
score: 34.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12609contigE-fasciculatus_F_contig12609:3663..3896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12609.2002.1mRNA_E-fasciculatus_F_contig12609.2002.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12609 3663..3896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12609.2002.1 ID=prot_E-fasciculatus_F_contig12609.2002.1|Name=mRNA_E-fasciculatus_F_contig12609.2002.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=78bp
LPNSIVTFPLFELQANAVAAAIVGRGPFPSLAEREQWLRGEEGRLREGGV
GPSSRGAHVLGGRQWEYLRRLLRIASGP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf