mRNA_E-fasciculatus_F_contig12606.1998.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12606.1998.1
Unique NamemRNA_E-fasciculatus_F_contig12606.1998.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: A0A6H5J7F4_9PHAE (GPI mannosyltransferase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7F4_9PHAE)

HSP 1 Score: 1066 bits (2756), Expect = 0.000e+0
Identity = 584/719 (81.22%), Postives = 607/719 (84.42%), Query Frame = 1
Query:    1 MSAIQHQPGSSTGSGATTTVISVAVASRAATVALMVLGNAVLPTHDAGGVHKFRPRTFPVPSGGAGTGSGTTSGVFAAFTRWDSAWFLSIADSGYPYPTVGGGDDDGGIDCRGTARAWGGGEYEY-EWGDYRQPE-------------ETQPRCRPDIPLEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDS---DAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAAGLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLAEEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHPWCARRVPSVYAHVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYGIACFFSAQLRSLRATAAEEGCDSSRGSGGXXXXXSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPHPAASPFERTGAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTAILLVRDGKGHGGGAGKGAAGGAPAALGTCLRWYLGVYFVVGAVLHANFLPWT 2106
            MS IQH PGSST SGATTTVISVAVASRAATVALMVLGNAVLPTHDAGGVHKFRPRTFPVPS GA    G   GVF+AFTRWDSAWFLSIADSGYPYPTVG  DDDG IDCRGT RAWGG EYE+ E+G + +               +TQPRCRPDIP+EEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSN+CFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLY MLSFAGLLVLFSEGHRRTARRT SSGGGDRQGTEG HHDASGGS+NAWWGC AVNTWVAA LLSLATL RSNGIAGAGVLVLEKLRWMARD+GLF++ G NQDE+S   DAAFP AA SSSAAAN  +RE R R  S  XXXXXX            N RRRDGG V WLRLAA L+VTALQALL+IAPYV  QAYAY KFCL GTRLAEEGG  DA N GGAD   P A++ P L MEQLHPWCA RVPSVYAHVQSTYWNVGAF+YYQWKQIPNFLLAAPALILTA+GIACFFSAQ RSLRAT AEEGCDSSRGSGG XXXXSNT GP  W   +   R WV+KLADVFFG PKLPHPAASPFERTGAAALMAQWAFFAFFAA+CMNVQVATRFLAAACPPLHWWTA LLVRDGKG        A GGAPAALGTCLRWYLG YFVVGAVLHANFLPWT
Sbjct:    1 MSPIQHHPGSSTRSGATTTVISVAVASRAATVALMVLGNAVLPTHDAGGVHKFRPRTFPVPSAGAXXXXGP-GGVFSAFTRWDSAWFLSIADSGYPYPTVGSDDDDG-IDCRGTTRAWGGEEYEWREYGQFGEDRTEGGDTDEAAPSAQTQPRCRPDIPMEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNSCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYAMLSFAGLLVLFSEGHRRTARRTTSSGGGDRQGTEGLHHDASGGSTNAWWGCEAVNTWVAAVLLSLATLARSNGIAGAGVLVLEKLRWMARDVGLFADGGGNQDENSAGVDAAFPLAARSSSAAANTHNREVRTRAGSRSXXXXXXDRAVTTSAGHTPNFRRRDGGAVAWLRLAACLVVTALQALLVIAPYVLFQAYAYHKFCLAGTRLAEEGGNGDALNSGGADGSSPLAAKLPSLTMEQLHPWCAWRVPSVYAHVQSTYWNVGAFRYYQWKQIPNFLLAAPALILTAHGIACFFSAQ-RSLRATTAEEGCDSSRGSGGNXXXXSNTPGPHPWARGMCFARRWVLKLADVFFGDPKLPHPAASPFERTGAAALMAQWAFFAFFAALCMNVQVATRFLAAACPPLHWWTASLLVRDGKGRDXXXXXXA-GGAPAALGTCLRWYLGAYFVVGAVLHANFLPWT 715          
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: A0A835YPR3_9STRA (GPI mannosyltransferase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPR3_9STRA)

HSP 1 Score: 242 bits (618), Expect = 4.770e-68
Identity = 215/689 (31.20%), Postives = 276/689 (40.06%), Query Frame = 1
Query:   70 AVASRAATVALMVLGNAVLPTHDAGGVHKFRPRTFPVPSGGAGTGSGTTSGVFAAFTRWDSAWFLSIADSGYPYPTVGGGDDDGGIDCRGTARAWGGGEYEYEWGDYRQPEETQPRCRPDIPLEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFS-EGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDSDAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAAGLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLAEEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHPWCARRVPSVYAHVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYGIA-----CFFSAQLRSLRATAAEEGCDSSRGSGGXXXXXSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPHPAASPFERTGAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTAILLVRDGKGHGGGAGKGAAGGAPAALGTCLRWYLGV----YFVVGAVLHANFLPWT 2106
            AV SR  TV LM+  +  LP H A GV +F           AG        + AAF +WD+AW L +AD GYP P                            W   R      P    D   EEQ HAFFPLY W+VR  AA ++     +   L+   +LV +AV +SN  FVASA  L+ L  +V GD   A  GALA+C  PAS FFST YTES +  L+FAG  VL S + H  + R+   +                               W++A LL  AT TRSNG++ A +  L KL W+  +                               +++R TR+                               GVV  LR  AG + TALQ  LI++PY+  Q YAY+KFC   +  A                              Q+HPWC R VPS+YA VQ  YW VG  +YY  + IPNFLLAAP + ++A+G         ++A + ++    A  G  S                 P +    R              GA ++  P AS      A A    W      A + MNVQV TRFLAAACPPLHW    LL                       G   +W+ GV    +FV G V HA FLPWT
Sbjct:   75 AVISRILTVGLMIGSSLYLPEHRATGVLRF-----------AGVDKHP---IAAAFVKWDAAWLLQVADKGYPPPP---------------------------WRMGRTSALKVPHSDVDF-FEEQVHAFFPLYSWIVRHLAACVQ-----SWFGLDWGFALVASAVALSNIAFVASAAALFHLSCSVLGDRRKALWGALAYCFNPASAFFSTTYTESAFAFLTFAGFAVLLSPKAHCTSLRKVPLA-------------------------------WLSAMLLCAATATRSNGVSAALIFGLAKLHWLVDEA------------------------------LKTRSTRS-------------------------------GVVVALRFIAGALATALQIALIVSPYIAFQGYAYQKFCAAASTKAL-----------------------------QMHPWCLRAVPSLYAWVQERYWGVGLLRYYTVRNIPNFLLAAPVVAVSAWGAVELWQRAAWTAVIETVHMLLAAMGVRSK----------------PSFAAQQRA------------HGAGRMLPPRAS----YAATAFALHWGALLCVAVLAMNVQVTTRFLAAACPPLHWRIGELLAGT-------------------KGRLCKWFTGVWVVLFFVAGPVAHALFLPWT 544          
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: A0A401S8V5_CHIPU (GPI mannosyltransferase 2 n=3 Tax=Chiloscyllium TaxID=34767 RepID=A0A401S8V5_CHIPU)

HSP 1 Score: 134 bits (338), Expect = 7.680e-30
Identity = 159/651 (24.42%), Postives = 234/651 (35.94%), Query Frame = 1
Query:  223 VFAAFTRWDSAWFLSIADSGYPYPTVGGGDDDGGIDCRGTARAWGGGEYEYEWGDYRQPEETQPRCRPDIPLEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDSDAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAA-GLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLA---EEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHPWCARRVPSVYAHVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYGIACFFSAQLRSLRATAAEEGCDSSRGSGGXXXXXSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPHPAASPFERTGAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTAILLVRDGKGHGGGAG-----KGAAGGAP--------------AALGTCLRWYLGVYFVVGAVLHANFLPWT 2106
            + + F+RWD+  FL IA+ GY Y                                                  E   AF PL+P  +R  A  +   L      LN  S L+LAAVL++   F+ SAV+LY LG  V  D  LA   +L FC+TPA+VF S AY+ES++ +L+F G+L L                                     W   G +       L SL+   RSNGI  AG L+  +L+     +    +K +  ++D                                                            WL L    +++ A   ++I+ P+V  Q Y YR FC      A    +  ++ A N+G     +P     P +       WC R+ PS+Y+++Q  YWNVG  +YYQ++Q+PNFLLA P + L                                G        +  P +   L L R  + K  +        PH   S F        +        F    M++QV TRFLA++ P L+W++A LL +   G  G        +   G  P              +    C+  Y  +Y+++G  LH NFLPWT
Sbjct:   56 LLSGFSRWDAQHFLFIAEFGYIY--------------------------------------------------EHNFAFLPLFPVSLRVVAETV---LSPLRCFLNLHSRLLLAAVLLNAVIFILSAVVLYHLGGVVLRDRRLAFLSSLLFCLTPANVFMSAAYSESMFVLLTFGGMLNL----------------------------------EKGWLVTGCI-------LFSLSAAVRSNGIVNAGFLLYSQLKLCTLYV---RHKSTVMEKDL--------------------------------------------------------YKSWLNLILRSVVLVAAGTMMIVLPFVLFQYYGYRTFCKSTMNPALDIPQPLLQLARNKG---YHVPDKESDPPI-------WCHRQYPSIYSYIQEAYWNVGFLRYYQFRQLPNFLLAFPVMAL--------------------------------GVWAAWQYVIVDPWYCVQLGLTRRKIRKKTEK----DSKPH---SSFHTDQVFVYIVHATVLLVFGICFMHIQVLTRFLASSSPILYWFSAHLLQKVEPGRLGQDSATSIYRNKFGIFPRNQLTTLLQDWNGCSLTARCILGYFVLYWLLGLSLHCNFLPWT 504          
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: UPI0009A3BE07 (GPI mannosyltransferase 2 n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3BE07)

HSP 1 Score: 129 bits (323), Expect = 6.600e-28
Identity = 173/709 (24.40%), Postives = 253/709 (35.68%), Query Frame = 1
Query:   58 VISVAVASRAATVALMVLGNAVLPTHDAGGVHKFRPRTFPVPSGGAGTGSGTTSGVFAAFTRWDSAWFLSIADSGYPYPTVGGGDDDGGIDCRGTARAWGGGEYEYEWGDYRQPEETQPRCRPDIPLEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDSDAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAA-GLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLA---EEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHPWCARRVPSVYAHVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYGIACFFSAQLRSLRATAAEEGCDSSRGSGGXXXXXSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPHPAASPFERTGAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTAILLVRDGKGHGGGAGKGAA--------GGAP--------------AALGTCLRWYLGVYFVVGAVLHANFLPWT 2106
            V+  A+ SR  ++   ++ N V+P H A      + R   +              + + F+RWD+  FL IA+ GY Y                                                  E   AF PL+P  +R  A  +   L      LN  S L+LAAVL++   FV SAV+LY LG  V  D  LA   +L FC+TPA+VF S AY+ES++ +L+F G+L L                                     W     +       L SL+   RSNGI  AG L+  +LR  +  +    +K    ++DS                                                           WL L    +++ A    +I+ P+V  Q Y Y  FC      A    +  ++ A N+G     +P     P +       WC R+ P +Y+++Q TYWNVG  +YYQ +Q+PNFLLA P + L                                G        +  P +   L L R    KL +      KL     S F        +        F    M++QV TRFLA++ P L+W++A LL +   GH     + +A        G  P              +    C+  Y  +Y+++G VLH NFLPWT
Sbjct:    8 VVHFAICSRILSILFQMVFNYVIPDHRADAFQAPQLRNLSISDE-------VLEILLSGFSRWDAQHFLFIAEFGYIY--------------------------------------------------EHNFAFLPLFPVCLRVVADLV---LSPLQRFLNLHSRLLLAAVLLNAVIFVLSAVVLYHLGVVVLRDRRLAFLSSLLFCLTPANVFMSAAYSESMFVLLAFGGMLNL----------------------------------EKGWLVTSCI-------LFSLSAAVRSNGIVNAGFLLYSQLRVCSLYV---RHKTKVMEKDS--------------------------------------------------------YRSWLNLILRSVLLVAAGTAMIVLPFVLFQYYGYLTFCKSTVNPALDIPQRLLQLAGNKGYR---VPDKETDPPV-------WCHRQYPIIYSYIQDTYWNVGFLRYYQLRQLPNFLLAFPVVAL--------------------------------GMWAAWQYVIIDPWYCVQLGLTRR---KLLEKIEQDSKLY----SSFHTDRVFVYVVHATLLLVFGICFMHIQVLTRFLASSSPILYWFSAHLLQKVEPGH---LAQDSATSIYCNKFGIFPRNQLTTLLQDWSGYSLTARCILGYFLLYWLLGLVLHCNFLPWT 504          
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: A0A1U7RJN6_ALLSI (GPI mannosyltransferase 2 n=4 Tax=Crocodylia TaxID=1294634 RepID=A0A1U7RJN6_ALLSI)

HSP 1 Score: 128 bits (322), Expect = 1.090e-27
Identity = 183/720 (25.42%), Postives = 263/720 (36.53%), Query Frame = 1
Query:   58 VISVAVASRAATVALMVLGNAVLPTHDAGGVHKFRPRTFPVPSGGAGTGSGTTSGVFAAFTRWDSAWFLSIADSGYPYPTVGGGDDDGGIDCRGTARAWGGGEYEYEWGDYRQPEETQPRCRPDIPLEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDSDAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAAGLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLAEEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHP-WCARRVPSVYAHVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYGIACFFSAQLRSLRATAAEEGCDSSRGSGGXXXXXSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPHPAASP---FERTGAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTA-------ILLVRDG-----------KGHGGGAGKGAAGGAPA---------------ALGTCLRWYLGVYFVVGAVLHANFLPWT 2106
            V+  AV  RA T+ L  L N ++P H A     F P     PS            +    + WD+  FL +A+ GY Y                                                  E   AFFP+YP  +R  A A   L    GL+  + S L+L+AVL++    V +AV+LY LG  V      A   AL FC+TPA+VF + AY+ES++ +L+F+                                         A W      +W +  L S A   RSNG+  AG L+  + R +A    L +  GS   +    A  W                                         R L          L LAA +++T   A L + P +F Q YAY +FC     ++ E  +     +   D G   AS      M  + P WC+ RVP +Y+++Q  YWNVG  +Y+Q KQIPNFLLAAP ++L+A+    + +A L+           + SRG  G                                         AA P   F  +G    +        F  +CM+VQV TR L ++ P L+W++A        LL R+G           +   G A  G  G   +               AL  C+  Y   ++++G +LH NFLPWT
Sbjct:   14 VLRFAVWCRALTLLLQALFNLLVPDHAA---DAFSPPRLSEPS----FCDWLLEWLLGGLSHWDAEHFLFVAEHGYVY--------------------------------------------------EHNFAFFPVYPLSIR--AVAEVTLWPLQGLLCLR-SRLLLSAVLLNALFSVLAAVVLYELGCVVLQCRRTAFLSALLFCLTPANVFMTAAYSESMFALLAFS-----------------------------------------AMWQLEKGRSWTSGLLFSFAAGVRSNGVINAGFLLYSQSRRLA--FQLQAGAGSVMKQ----AQVW-----------------------------------------RQL----------LGLAASVVLTC--AGLFLPPALF-QFYAYLRFC--DPDVSPERAVPQPLLQLAVDKGYRLAS------MTGVKPAWCSHRVPMIYSYIQDVYWNVGFLRYFQLKQIPNFLLAAPIMMLSAWAAGIYLTANLQHCLTLGLVRRRNKSRGGEG-----------------------------------------AAKPGVGFCSSGVFVYVVHATALLVFGLLCMHVQVLTRLLGSSSPVLYWFSAHLLQDSDALLWREGDPTQTAASLSERPRLGSAFLGLFGTGVSENPLPPLLLNYRRNTALTKCVLGYFLSFWLLGLILHCNFLPWT 523          
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: UPI000719D1EA (GPI mannosyltransferase 2-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719D1EA)

HSP 1 Score: 127 bits (319), Expect = 1.930e-27
Identity = 171/693 (24.68%), Postives = 232/693 (33.48%), Query Frame = 1
Query:  115 NAVLPTHDAGGVHKFRPRTFPVPSGGAGTGSGTTSGVFAAFTRWDSAWFLSIADSGYPYPTVGGGDDDGGIDCRGTARAWGGGEYEYEWGDYRQPEETQPRCRPDIPLEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTC-FVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDSDAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAAGLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLAEEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHP-WCARRVPSVYAHVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYGIACFFSAQLRSLRATAAEEGCDSSRGSGGXXXXXSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPHPAASPFERTGAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTAILLV---------------RDGKGHGGGAGKGAAGGAPAALGTCLRW------------YLGVYFVVGAVLHANFLPWT 2106
            N+V+P HDA     F+P   P   GGA  G      +   F RWD+ +FL +A+ GY +                                                  E   AF PL+P     AA+  RA L          SSLVL +    N   FV SAV L  LG   TG + +A    + +C  PASVFFS AY+ES++   +F GL++                                         C     + A+ +  L   TR+NG+  AG +V  +LR                                         T A                        +L RR G V   LR+ A     A  A + +AP++  Q YAY  FC             D    G A+  +        +A +   P WC   +P  Y+HVQ  YW+VG  +YY+ KQIPNF+LAAPAL L    +A +   +          +     R +G                                              F   G    +A  A   F  A   +VQV+TR L ++ P ++W+ A LL                R  +   G +GK  A G    LG   RW            Y   YFVVG  +H NFLPWT
Sbjct:   26 NSVIPDHDA---DAFQP---PCGGGGATLGDRIIDALLGGFRRWDALYFLHVAERGYTF--------------------------------------------------ENCLAFLPLFPLT---AASLARAALAAAPASFLALSSLVLVSSTALNVVYFVVSAVFLSHLGRLATGSTEVACVATMLYCFNPASVFFSAAYSESMFAAATFCGLIL-----------------------------------------CEKDQLFAASVVFGLGAGTRANGVVSAGFVVYFRLR----------------------------------------RTLA------------------------SLPRRRGVVETSLRVTAATTSAAAYACICVAPFLAYQYYAYGVFCARPAPPPPP----DLLEFGRANGYV--------VAGDGRRPLWCDAPLPLSYSHVQREYWDVGFLRYYRAKQIPNFVLAAPALYLCGRAVASYVRRRWEHASCLGFRQAAPRRRDAG----------------------------------------------FYADGCFVYVAHCATLLFTCAAFAHVQVSTRLLCSSSPVIYWYCAQLLCDTSXXXXXXXXXXXGRRWRWDEGLSGKENATGF--VLGLLERWRTLDAGKRFVVLYFISYFVVGIAMHCNFLPWT 494          
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: UPI000771CA46 (GPI mannosyltransferase 2 isoform X1 n=9 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771CA46)

HSP 1 Score: 124 bits (312), Expect = 1.710e-26
Identity = 116/452 (25.66%), Postives = 176/452 (38.94%), Query Frame = 1
Query:  238 TRWDSAWFLSIADSGYPYPTVGGGDDDGGIDCRGTARAWGGGEYEYEWGDYRQPEETQPRCRPDIPLEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDSDAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAAGLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLAEEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHPWCARRVPSVYAHVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYG 1593
            TRWD+ +FL IA  GY Y                                                  E   AFFPL+PW +R        LLL  G  + + S L+L A L++  CFV SA  LY L   V GD + A + ++ FC+ PAS+FF+ AYTES++T L+F  +L  ++EG                                +W        W++   +SL+ + RSNG+   G LV     W+ + +                           A+ +    T +RP S                            V+ ++++   LI+T+       +P++ +Q Y Y  FC+       +  ++  F+ G    G          + + L  WC   +P  Y+HVQS YWNVG  +YY++KQIPNF+LA P L +   G
Sbjct:   68 TRWDAQYFLHIAKYGYTY--------------------------------------------------ENTLAFFPLFPWTIRCLTKIFLVLLLPLGFSVQEDSVLLLTATLLNLVCFVGSACTLYDLSYKVLGDPVTAYKASVLFCINPASIFFTAAYTESMFTYLTFRSMLA-YAEG-------------------------------TSW-------QWLS---VSLSAIVRSNGLTNIGFLVYG---WLQKTVDFIQ-----------------------ASELTFLITSSRPISYQRRIQFVLFFGYHL-------------VIRFMKIIGILILTS-------SPFLLIQVYNYLIFCVEEMPNFPKQVLDYGFDNGFLLPG----------SRDLL--WCRYSIPMAYSHVQSRYWNVGFVKYYEFKQIPNFILAVPVLYIMLAG 369          
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: A0A3M6VLU7_9STRA (GPI mannosyltransferase 2 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLU7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.620e-26
Identity = 150/564 (26.60%), Postives = 206/564 (36.52%), Query Frame = 1
Query:  442 EQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDSDAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAAGLIVTALQALLIIAPYVFVQAYAYRKFC------LGGTRLAEEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHPWCARRVPSVYA---HVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYGIACFFSAQLRSLRATAAEEGCDSSRGSGGXXXXXSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPHPAASPFERTGAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTAILLVRDGKGHGGGAGKGAAGGAPAALGTCLRWYLGVYFVVGAVLHANFLPWT 2106
            E  HAFFPLYP ++RW A  L          L   S+++ +  ++SN  FV +A+ LYRLG  V GD ++ARR A  FCVTP+S+F S+ Y+ESL  +LSF+G+  L         RRT                            C  V     A L   A+ TRSNGI                 + LF                W             R T + P                     R + R  G    W+R AA         +L +AP +     +   +C      LGG    E  G  +  +R                       WCA  VP+V+A    +QS YWNVG F+YY+  Q+PNFLLAAP + L+ + +  +F   +                             G PR +  L+  R                     S +  T      A W F    A + +++QV TR L A CPPL W  A LL               A       G  +  Y  ++ V+G+VL  +F PWT
Sbjct:   69 EHFHAFFPLYPLLMRWFAHFLP---------LEDKSAVIASGWIISNVSFVLAALFLYRLGCIVIGDEIIARRAAYLFCVTPSSIFMSSVYSESLMCLLSFSGMYFLAKHAQTPKPRRTF---------------------------CDLV---YCALLFGAASATRSNGIL----------------LSLF--------------IAW------------HRVTVSPPP--------------------REMVRFFGF---WIRTAA-------LGVLAVAPQIMYFVTSMMPYCPLLVKHLGG----EVSGSNEMEDRS----------------------WCAMAVPNVFAMYTFIQSEYWNVGLFRYYELNQLPNFLLAAPIIALSVHALHGYFRGTI---------------------------VPGRPRVI--LQQERG-------------------KSGWRGTALTPYYAHWLFLIVNALLVVHIQVTTRLLCA-CPPLFWHPASLLCDSTITR-------KASPVMTRYGRVIVTYFLLFTVLGSVLFPSFYPWT 439          
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: A0A8J9VYF4_BRALA (PIGV protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VYF4_BRALA)

HSP 1 Score: 122 bits (305), Expect = 1.150e-25
Identity = 173/695 (24.89%), Postives = 246/695 (35.40%), Query Frame = 1
Query:   70 AVASRAATVALMVLGNAVLPTHDAGGVHKFRPRTFPVPSGGAGTGSGTTSGVFAAFTRWDSAWFLSIADSGYPYPTVGGGDDDGGIDCRGTARAWGGGEYEYEWGDYRQPEETQPRCRPDIPLEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDSDAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAAGLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLAEEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHPWCARRVPSVYAHVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYGIACFFSAQLRSLRATAAEEGCDSSRGSGGXXXXXSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPHPAASPFERTGAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTAILLVRDGKGHG----GGAGKGAAGGAPAALGTCLRW------------YLGVYFVVGAVLHANFLPWT 2106
            AV SR   +   ++ N ++P HDAG    F P   PV     G G    + +F  F+ WDSA FL IA++GY   T+                                               ++  AFFPL+P  V+  +  +   L      +N  S+L++ AV V+   FVA+ V+L++L      D  LA R AL FCV PA +F S AY+ESL+  +SF G+L +  + +                                           AA L +L++ TRSNGI   G +V    + +   + LF  + S QD                                                               L +   L+ T    L I+AP+V  Q +AY  +C    R          F     +   P ++  P        PWC   VPS Y+++Q ++W VG  +YYQ KQIPNF+LAAP + L    +  +        R                       TLG    +GA R       K  D      + P    + F        +A   F   F    M++QV TRFLA++ P ++W+ A L  RD   H       +G       P  L     W            Y   Y VVG  LH NF  WT
Sbjct:   12 AVFSRILLILWQMVSNNLIPDHDAG---VFNP---PVRHQ-VGLGDHFINVLFGGFSHWDSAHFLYIAENGY---TI-----------------------------------------------QKHFAFFPLFPTTVKTVSETV---LFPLHFFMNGHSALLVTAVAVNVLFFVAATVVLFKLSIMTLHDRQLALRTALLFCVNPAGIFMSAAYSESLFAFVSFYGMLAMERKQYLP-----------------------------------------AALLFALSSTTRSNGIVNCGFVVFFTTKELVSRLRLFLMEFSLQDV--------------------------------------------------------------LMMMVKLVSTVCYVLAILAPFVAFQYHAYYLYCSDFEREKALLLWHPLFPTDNEEYLPPGSTTIP--------PWCNWTVPSAYSYIQDSFWEVGFLRYYQLKQIPNFVLAAPMIALCGSAVYSYCRVNWSLCR-----------------------TLG----LGAER-------KEGD------EKPR---TGFNSPQVFVYIAHLGFLLLFGVTNMHIQVVTRFLASSSPVIYWYAAHL-TRDDPPHSQTNSATSGSTVCPNNPV-LQQIHHWRSTRRTTQAVLGYFIFYNVVGVALHGNFFNWT 490          
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Match: A0A674J3V3_TERCA (GPI mannosyltransferase 2 n=11 Tax=Durocryptodira TaxID=1579337 RepID=A0A674J3V3_TERCA)

HSP 1 Score: 121 bits (303), Expect = 2.840e-25
Identity = 172/718 (23.96%), Postives = 251/718 (34.96%), Query Frame = 1
Query:   58 VISVAVASRAATVALMVLGNAVLPTHDAGGVHKFRPRTFPVPSGGAGTGSGTTSGVFAAFTRWDSAWFLSIADSGYPYPTVGGGDDDGGIDCRGTARAWGGGEYEYEWGDYRQPEETQPRCRPDIPLEEQAHAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVASAVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAGLLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNTWVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDSDAAFPWAASSSSAAANIQSRETRARPESXXXXXXXXXXXXXXXXXXNRNLRRRDGGVVPWLRLAAGLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLAEEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHP-WCARRVPSVYAHVQSTYWNVGAFQYYQWKQIPNFLLAAPALILTAYGIACFFSAQLRSLRATAAEEGCDSSRGSGGXXXXXSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPHPAASPFERT-GAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTAILLV-----------------------RDGKGHGGGAGKGAAGGA----------PAALGTCLRWYLGVYFVVGAVLHANFLPWT 2106
            VI  AV  RA T+ L  L N ++P H A     F P     PS         +  +    + WD+  FL IA+ GY Y                                                  E   AFFP+YP  VR   A  + +L     +L   S L+L+AVL++    V +A +LY LG  V     +A   A+ FC+TPA+VF + AY+ES++  L F+ +L L  +G R                                        W +  L SLA   RSNG+   G L+  +    ++D+ L    G+                               P+                                W RL        L +  +  P+   Q+YAY +FC      + E  +     +   D G   A      AM  + P WC++ +P VY+++Q  YWNVG  +Y++ KQ+PNFLLAAP  +L ++    + +A                                 P++   L LVR             P       S F     A AL+A       F  +CM+VQV TRFL ++ P L+W++A LL                          G    G   KG +              + L  C+  Y   Y+++G +LH NFLPWT
Sbjct:   14 VIRFAVCCRALTLVLQALFNFLIPDHAA---DAFSPPRLSEPS----LCDWLSEWLLGGLSHWDAEHFLFIAEHGYLY--------------------------------------------------EHNFAFFPVYPLSVR---AVAKVILCPLQGLLCLRSRLLLSAVLLNALLSVLAAAVLYELGCVVLRCRRMAFLSAVLFCLTPANVFMTAAYSESMFAFLVFSAMLQL-EKGQR----------------------------------------WTSGLLFSLAAGVRSNGVINTGFLIYSQ----SKDLALQLQAGAGT-------------------------VMKLPQ-------------------------------VWRRLLRFAASVVLMSAGVFFPFALFQSYAYLRFC--NPDASSEHAVPRPLLQLAVDKGYRLA------AMSGMKPAWCSQGLPVVYSYIQDVYWNVGFLRYFELKQVPNFLLAAPVTVLGSWATWFYLTAN--------------------------------PQYCLMLGLVRRKKEGRKGEDSDKPVDGFRCTSVFVYVVHAMALLA-------FGILCMHVQVVTRFLGSSTPVLYWFSAHLLQDYEPLLWKEGAAIQTAASLSKKPSVGSSFPGSFRKGISENPIMRLLLNWRISSPLTKCILGYFLSYWLLGLILHCNFLPWT 523          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12606.1998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7F4_9PHAE0.000e+081.22GPI mannosyltransferase 2 n=2 Tax=Ectocarpus TaxID... [more]
A0A835YPR3_9STRA4.770e-6831.20GPI mannosyltransferase 2 n=1 Tax=Tribonema minus ... [more]
A0A401S8V5_CHIPU7.680e-3024.42GPI mannosyltransferase 2 n=3 Tax=Chiloscyllium Ta... [more]
UPI0009A3BE076.600e-2824.40GPI mannosyltransferase 2 n=1 Tax=Rhincodon typus ... [more]
A0A1U7RJN6_ALLSI1.090e-2725.42GPI mannosyltransferase 2 n=4 Tax=Crocodylia TaxID... [more]
UPI000719D1EA1.930e-2724.68GPI mannosyltransferase 2-like n=1 Tax=Priapulus c... [more]
UPI000771CA461.710e-2625.66GPI mannosyltransferase 2 isoform X1 n=9 Tax=Cephu... [more]
A0A3M6VLU7_9STRA4.620e-2626.60GPI mannosyltransferase 2 n=1 Tax=Peronospora effu... [more]
A0A8J9VYF4_BRALA1.150e-2524.89PIGV protein n=1 Tax=Branchiostoma lanceolatum Tax... [more]
A0A674J3V3_TERCA2.840e-2523.96GPI mannosyltransferase 2 n=11 Tax=Durocryptodira ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12606contigE-fasciculatus_F_contig12606:301..2409 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1097.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FMC4
Preferred namePIGV
KEGG koko:K06699,ko:K07542
KEGG ReactionR05921
KEGG Pathwayko00563,ko01100,ko03050,map00563,map01100,map03050
KEGG ModuleM00065
GOsGO:0000030,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0003674,GO:0003824,GO:0004376,GO:0004584,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005886,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007029,GO:0007275,GO:0007399,GO:0007423,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009653,GO:0009887,GO:0009987,GO:0010256,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016254,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019637,GO:0022008,GO:0030154,GO:0030176,GO:0030182,GO:0031224,GO:0031227,GO:0031501,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034645,GO:0036211,GO:0042051,GO:0042052,GO:0042157,GO:0042158,GO:0042175,GO:0042461,GO:0042462,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0045048,GO:0045052,GO:0045184,GO:0045313,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0046530,GO:0048468,GO:0048513,GO:0048592,GO:0048666,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070085,GO:0070727,GO:0071704,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0090407,GO:0090596,GO:0097502,GO:0098827,GO:0120097,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509,GO:1990234
EggNOG free text desc.dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity
EggNOG OGsCOG5542@1,KOG2647@2759
COG Functional cat.G
CAZyGT76
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko03051
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGPI mannosyltransferase, family GT76
Ec32 orthologEc-17_003500.1
Exons1
Model size2109
Cds size2109
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927769.2826695-CDS-E-fasciculatus_F_contig12606:300..24091622927769.2826695-CDS-E-fasciculatus_F_contig12606:300..2409Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12606 301..2409 -
1695995685.9742815-CDS-E-fasciculatus_F_contig12606:300..24091695995685.9742815-CDS-E-fasciculatus_F_contig12606:300..2409Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12606 301..2409 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12606.1998.1prot_E-fasciculatus_F_contig12606.1998.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12606 301..2409 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12606.1998.1

>prot_E-fasciculatus_F_contig12606.1998.1 ID=prot_E-fasciculatus_F_contig12606.1998.1|Name=mRNA_E-fasciculatus_F_contig12606.1998.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=703bp
MSAIQHQPGSSTGSGATTTVISVAVASRAATVALMVLGNAVLPTHDAGGV
HKFRPRTFPVPSGGAGTGSGTTSGVFAAFTRWDSAWFLSIADSGYPYPTV
GGGDDDGGIDCRGTARAWGGGEYEYEWGDYRQPEETQPRCRPDIPLEEQA
HAFFPLYPWVVRWAAAALRALLLTTGLVLNKASSLVLAAVLVSNTCFVAS
AVLLYRLGAAVTGDSLLARRGALAFCVTPASVFFSTAYTESLYTMLSFAG
LLVLFSEGHRRTARRTASSGGGDRQGTEGFHHDASGGSSNAWWGCGAVNT
WVAAALLSLATLTRSNGIAGAGVLVLEKLRWMARDIGLFSNKGSNQDEDS
DAAFPWAASSSSAAANIQSRETRARPESSSGGGDDDRAVATTAAGHNRNL
RRRDGGVVPWLRLAAGLIVTALQALLIIAPYVFVQAYAYRKFCLGGTRLA
EEGGIEDAFNRGGADSGIPSASEPPHLAMEQLHPWCARRVPSVYAHVQST
YWNVGAFQYYQWKQIPNFLLAAPALILTAYGIACFFSAQLRSLRATAAEE
GCDSSRGSGGSRGGGSNTLGPPRWVGALRLVRAWVVKLADVFFGAPKLPH
PAASPFERTGAAALMAQWAFFAFFAAVCMNVQVATRFLAAACPPLHWWTA
ILLVRDGKGHGGGAGKGAAGGAPAALGTCLRWYLGVYFVVGAVLHANFLP
WT*
back to top

mRNA from alignment at E-fasciculatus_F_contig12606:301..2409-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12606.1998.1 ID=mRNA_E-fasciculatus_F_contig12606.1998.1|Name=mRNA_E-fasciculatus_F_contig12606.1998.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2109bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12606:301..2409- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCGGCAATCCAGCACCAACCCGGCAGCAGCACCGGATCCGGCGCGAC CACGACAGTAATCTCTGTCGCTGTGGCATCCAGGGCGGCCACCGTGGCCC TGATGGTCCTCGGGAACGCTGTCCTCCCTACGCATGACGCCGGCGGCGTG CACAAGTTCCGACCGAGAACATTCCCCGTGCCGTCCGGAGGCGCCGGCAC CGGATCCGGCACCACCAGCGGAGTGTTTGCGGCCTTCACGCGGTGGGACT CGGCGTGGTTCCTGAGCATTGCGGACAGCGGCTACCCTTACCCTACGGTA GGCGGTGGTGATGATGATGGGGGAATTGATTGCAGGGGAACGGCCAGAGC TTGGGGCGGAGGGGAGTACGAGTACGAGTGGGGAGATTATCGGCAGCCGG AAGAAACGCAACCCCGCTGCCGACCCGACATCCCGCTGGAAGAACAAGCC CACGCGTTCTTCCCGCTCTACCCGTGGGTCGTGCGGTGGGCCGCGGCGGC GCTCCGTGCCCTCCTGCTCACAACCGGTCTCGTCTTGAACAAGGCCAGCA GCCTCGTCCTGGCCGCTGTACTCGTCAGCAACACGTGCTTCGTGGCGTCC GCGGTGCTGCTGTACAGGCTGGGAGCGGCCGTGACGGGCGACTCTCTCCT GGCTCGCCGAGGCGCCCTCGCCTTCTGCGTCACCCCCGCCAGCGTCTTCT TCAGCACGGCATACACGGAGAGCCTCTACACCATGCTGTCGTTCGCTGGC CTGTTGGTTCTCTTCTCGGAAGGGCATCGAAGAACGGCGAGAAGAACCGC CTCAAGCGGCGGAGGGGATCGACAGGGGACGGAGGGCTTCCACCATGACG CCAGTGGGGGTAGCAGCAACGCCTGGTGGGGGTGCGGAGCCGTCAACACG TGGGTCGCCGCGGCGTTGTTGTCCTTGGCCACTCTTACTCGGTCGAACGG AATCGCCGGCGCTGGAGTGCTGGTTCTGGAAAAGCTGCGCTGGATGGCGA GGGACATCGGGCTCTTTTCCAACAAAGGCAGCAACCAAGACGAGGATAGC GACGCCGCATTTCCCTGGGCAGCGAGCTCGTCGTCCGCCGCAGCTAACAT CCAAAGCCGGGAGACGAGGGCTCGGCCAGAGAGTAGCAGCGGCGGCGGCG ACGACGACCGTGCCGTTGCAACCACCGCCGCCGGCCACAACCGGAACCTT CGAAGGCGAGACGGTGGCGTCGTGCCCTGGCTGAGGCTGGCCGCCGGCCT GATCGTCACCGCGCTGCAGGCTCTCCTCATCATAGCGCCATACGTTTTCG TCCAGGCTTACGCGTACCGCAAGTTCTGCCTCGGAGGGACAAGACTGGCG GAGGAAGGCGGCATCGAAGACGCCTTCAACAGGGGGGGTGCCGACAGCGG TATCCCATCGGCATCAGAGCCGCCGCACCTGGCCATGGAGCAGCTTCACC CCTGGTGTGCCCGGAGAGTGCCGAGCGTCTACGCGCACGTTCAGTCGACG TACTGGAACGTGGGAGCCTTCCAGTACTACCAATGGAAGCAGATCCCCAA TTTTTTGCTAGCGGCCCCGGCGTTGATCCTGACGGCCTACGGAATCGCCT GTTTCTTCTCCGCCCAGCTGCGGTCGCTTCGCGCGACTGCGGCAGAGGAA GGGTGTGATTCTTCCCGTGGCAGCGGCGGCAGCCGAGGTGGGGGCAGCAA CACGCTGGGACCGCCTCGATGGGTGGGGGCCTTGCGTCTTGTTCGGGCAT GGGTGGTGAAGCTGGCGGATGTCTTTTTCGGCGCCCCGAAGCTGCCGCAC CCGGCGGCGTCGCCGTTTGAGCGCACCGGGGCGGCGGCGCTGATGGCGCA GTGGGCCTTCTTCGCCTTCTTCGCCGCCGTGTGCATGAACGTCCAGGTCG CCACCCGCTTCCTAGCCGCCGCGTGCCCCCCCCTCCACTGGTGGACTGCT ATCCTTCTGGTCAGGGACGGGAAAGGGCACGGCGGTGGAGCCGGAAAGGG GGCGGCGGGCGGGGCACCGGCAGCACTGGGAACCTGCTTGCGGTGGTACC TCGGGGTGTATTTCGTGGTGGGCGCTGTGCTGCACGCGAACTTTTTGCCG TGGACATGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12606:301..2409-

>mRNA_E-fasciculatus_F_contig12606.1998.1 ID=mRNA_E-fasciculatus_F_contig12606.1998.1|Name=mRNA_E-fasciculatus_F_contig12606.1998.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4218bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12606:301..2409- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCGGCAATCCAGCACCAACCCGGCAGCAGCACCGGATCCGGCGCGAC
CACGACAGTAATCTCTGTCGCTGTGGCATCCAGGGCGGCCACCGTGGCCC
TGATGGTCCTCGGGAACGCTGTCCTCCCTACGCATGACGCCGGCGGCGTG
CACAAGTTCCGACCGAGAACATTCCCCGTGCCGTCCGGAGGCGCCGGCAC
CGGATCCGGCACCACCAGCGGAGTGTTTGCGGCCTTCACGCGGTGGGACT
CGGCGTGGTTCCTGAGCATTGCGGACAGCGGCTACCCTTACCCTACGGTA
GGCGGTGGTGATGATGATGGGGGAATTGATTGCAGGGGAACGGCCAGAGC
TTGGGGCGGAGGGGAGTACGAGTACGAGTGGGGAGATTATCGGCAGCCGG
AAGAAACGCAACCCCGCTGCCGACCCGACATCCCGCTGGAAGAACAAGCC
CACGCGTTCTTCCCGCTCTACCCGTGGGTCGTGCGGTGGGCCGCGGCGGC
GCTCCGTGCCCTCCTGCTCACAACCGGTCTCGTCTTGAACAAGGCCAGCA
GCCTCGTCCTGGCCGCTGTACTCGTCAGCAACACGTGCTTCGTGGCGTCC
GCGGTGCTGCTGTACAGGCTGGGAGCGGCCGTGACGGGCGACTCTCTCCT
GGCTCGCCGAGGCGCCCTCGCCTTCTGCGTCACCCCCGCCAGCGTCTTCT
TCAGCACGGCATACACGGAGAGCCTCTACACCATGCTGTCGTTCGCTGGC
CTGTTGGTTCTCTTCTCGGAAGGGCATCGAAGAACGGCGAGAAGAACCGC
CTCAAGCGGCGGAGGGGATCGACAGGGGACGGAGGGCTTCCACCATGACG
CCAGTGGGGGTAGCAGCAACGCCTGGTGGGGGTGCGGAGCCGTCAACACG
TGGGTCGCCGCGGCGTTGTTGTCCTTGGCCACTCTTACTCGGTCGAACGG
AATCGCCGGCGCTGGAGTGCTGGTTCTGGAAAAGCTGCGCTGGATGGCGA
GGGACATCGGGCTCTTTTCCAACAAAGGCAGCAACCAAGACGAGGATAGC
GACGCCGCATTTCCCTGGGCAGCGAGCTCGTCGTCCGCCGCAGCTAACAT
CCAAAGCCGGGAGACGAGGGCTCGGCCAGAGAGTAGCAGCGGCGGCGGCG
ACGACGACCGTGCCGTTGCAACCACCGCCGCCGGCCACAACCGGAACCTT
CGAAGGCGAGACGGTGGCGTCGTGCCCTGGCTGAGGCTGGCCGCCGGCCT
GATCGTCACCGCGCTGCAGGCTCTCCTCATCATAGCGCCATACGTTTTCG
TCCAGGCTTACGCGTACCGCAAGTTCTGCCTCGGAGGGACAAGACTGGCG
GAGGAAGGCGGCATCGAAGACGCCTTCAACAGGGGGGGTGCCGACAGCGG
TATCCCATCGGCATCAGAGCCGCCGCACCTGGCCATGGAGCAGCTTCACC
CCTGGTGTGCCCGGAGAGTGCCGAGCGTCTACGCGCACGTTCAGTCGACG
TACTGGAACGTGGGAGCCTTCCAGTACTACCAATGGAAGCAGATCCCCAA
TTTTTTGCTAGCGGCCCCGGCGTTGATCCTGACGGCCTACGGAATCGCCT
GTTTCTTCTCCGCCCAGCTGCGGTCGCTTCGCGCGACTGCGGCAGAGGAA
GGGTGTGATTCTTCCCGTGGCAGCGGCGGCAGCCGAGGTGGGGGCAGCAA
CACGCTGGGACCGCCTCGATGGGTGGGGGCCTTGCGTCTTGTTCGGGCAT
GGGTGGTGAAGCTGGCGGATGTCTTTTTCGGCGCCCCGAAGCTGCCGCAC
CCGGCGGCGTCGCCGTTTGAGCGCACCGGGGCGGCGGCGCTGATGGCGCA
GTGGGCCTTCTTCGCCTTCTTCGCCGCCGTGTGCATGAACGTCCAGGTCG
CCACCCGCTTCCTAGCCGCCGCGTGCCCCCCCCTCCACTGGTGGACTGCT
ATCCTTCTGGTCAGGGACGGGAAAGGGCACGGCGGTGGAGCCGGAAAGGG
GGCGGCGGGCGGGGCACCGGCAGCACTGGGAACCTGCTTGCGGTGGTACC
TCGGGGTGTATTTCGTGGTGGGCGCTGTGCTGCACGCGAACTTTTTGCCG
TGGACATGAATGTCGGCAATCCAGCACCAACCCGGCAGCAGCACCGGATC
CGGCGCGACCACGACAGTAATCTCTGTCGCTGTGGCATCCAGGGCGGCCA
CCGTGGCCCTGATGGTCCTCGGGAACGCTGTCCTCCCTACGCATGACGCC
GGCGGCGTGCACAAGTTCCGACCGAGAACATTCCCCGTGCCGTCCGGAGG
CGCCGGCACCGGATCCGGCACCACCAGCGGAGTGTTTGCGGCCTTCACGC
GGTGGGACTCGGCGTGGTTCCTGAGCATTGCGGACAGCGGCTACCCTTAC
CCTACGGTAGGCGGTGGTGATGATGATGGGGGAATTGATTGCAGGGGAAC
GGCCAGAGCTTGGGGCGGAGGGGAGTACGAGTACGAGTGGGGAGATTATC
GGCAGCCGGAAGAAACGCAACCCCGCTGCCGACCCGACATCCCGCTGGAA
GAACAAGCCCACGCGTTCTTCCCGCTCTACCCGTGGGTCGTGCGGTGGGC
CGCGGCGGCGCTCCGTGCCCTCCTGCTCACAACCGGTCTCGTCTTGAACA
AGGCCAGCAGCCTCGTCCTGGCCGCTGTACTCGTCAGCAACACGTGCTTC
GTGGCGTCCGCGGTGCTGCTGTACAGGCTGGGAGCGGCCGTGACGGGCGA
CTCTCTCCTGGCTCGCCGAGGCGCCCTCGCCTTCTGCGTCACCCCCGCCA
GCGTCTTCTTCAGCACGGCATACACGGAGAGCCTCTACACCATGCTGTCG
TTCGCTGGCCTGTTGGTTCTCTTCTCGGAAGGGCATCGAAGAACGGCGAG
AAGAACCGCCTCAAGCGGCGGAGGGGATCGACAGGGGACGGAGGGCTTCC
ACCATGACGCCAGTGGGGGTAGCAGCAACGCCTGGTGGGGGTGCGGAGCC
GTCAACACGTGGGTCGCCGCGGCGTTGTTGTCCTTGGCCACTCTTACTCG
GTCGAACGGAATCGCCGGCGCTGGAGTGCTGGTTCTGGAAAAGCTGCGCT
GGATGGCGAGGGACATCGGGCTCTTTTCCAACAAAGGCAGCAACCAAGAC
GAGGATAGCGACGCCGCATTTCCCTGGGCAGCGAGCTCGTCGTCCGCCGC
AGCTAACATCCAAAGCCGGGAGACGAGGGCTCGGCCAGAGAGTAGCAGCG
GCGGCGGCGACGACGACCGTGCCGTTGCAACCACCGCCGCCGGCCACAAC
CGGAACCTTCGAAGGCGAGACGGTGGCGTCGTGCCCTGGCTGAGGCTGGC
CGCCGGCCTGATCGTCACCGCGCTGCAGGCTCTCCTCATCATAGCGCCAT
ACGTTTTCGTCCAGGCTTACGCGTACCGCAAGTTCTGCCTCGGAGGGACA
AGACTGGCGGAGGAAGGCGGCATCGAAGACGCCTTCAACAGGGGGGGTGC
CGACAGCGGTATCCCATCGGCATCAGAGCCGCCGCACCTGGCCATGGAGC
AGCTTCACCCCTGGTGTGCCCGGAGAGTGCCGAGCGTCTACGCGCACGTT
CAGTCGACGTACTGGAACGTGGGAGCCTTCCAGTACTACCAATGGAAGCA
GATCCCCAATTTTTTGCTAGCGGCCCCGGCGTTGATCCTGACGGCCTACG
GAATCGCCTGTTTCTTCTCCGCCCAGCTGCGGTCGCTTCGCGCGACTGCG
GCAGAGGAAGGGTGTGATTCTTCCCGTGGCAGCGGCGGCAGCCGAGGTGG
GGGCAGCAACACGCTGGGACCGCCTCGATGGGTGGGGGCCTTGCGTCTTG
TTCGGGCATGGGTGGTGAAGCTGGCGGATGTCTTTTTCGGCGCCCCGAAG
CTGCCGCACCCGGCGGCGTCGCCGTTTGAGCGCACCGGGGCGGCGGCGCT
GATGGCGCAGTGGGCCTTCTTCGCCTTCTTCGCCGCCGTGTGCATGAACG
TCCAGGTCGCCACCCGCTTCCTAGCCGCCGCGTGCCCCCCCCTCCACTGG
TGGACTGCTATCCTTCTGGTCAGGGACGGGAAAGGGCACGGCGGTGGAGC
CGGAAAGGGGGCGGCGGGCGGGGCACCGGCAGCACTGGGAACCTGCTTGC
GGTGGTACCTCGGGGTGTATTTCGTGGTGGGCGCTGTGCTGCACGCGAAC
TTTTTGCCGTGGACATGA
back to top