mRNA_E-fasciculatus_F_contig126.1991.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig126.1991.1
Unique NamemRNA_E-fasciculatus_F_contig126.1991.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: D7FYL5_ECTSI (MFAP1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL5_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 2.150e-130
Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 1
Query:  169 MTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDDDSVKVEDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRRKKKNPE 750
            MTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDDDS+KVEDDVRRRSYN PTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRRKKKNPE
Sbjct:    1 MTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDDDSLKVEDDVRRRSYNEPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRRKKKNPE 194          
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: A0A7S2CMS0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMS0_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.300e-61
Identity = 115/247 (46.56%), Postives = 162/247 (65.59%), Query Frame = 1
Query:    1 VLKPVFVPKARRETAVERARLEXXXXXXXXXXXXXXXXXXXXXXXLAAQVVRREEEMTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDDDSVKVEDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRRKKK 741
            ++KPVFV + +R T +E  R                         + A+ +RREE+M EN +GDN+S+ + P D DDLD+ +A+E WKVREL R+ ++   +E   KE+E+T RRR +TD++R  ED+ LGK   +DK   KF+QKYYHKGAFYMDD+  + +D VR+R Y+ PTLEDKFDK  +P+ MQVK FG +GQTK+THL ++DTT+WDS W Q + +      KMSG+G+ID+  ++R KK
Sbjct:  194 LMKPVFVSRNKRATILEAERKVKVEETKRKAAAVKLEQRKIETRNMVAEKIRREEQMVENQVGDNDSDDNMPSDTDDLDDPVAYEAWKVRELQRLTRDNAIKEKMKKEKEETERRRALTDEQRGAEDLALGKVKTEDKAKWKFLQKYYHKGAFYMDDEEHEKKD-VRQRKYDQPTLEDKFDKAALPRVMQVKKFGFAGQTKYTHLLDQDTTEWDSPWMQNSALRQTTDSKMSGLGDIDSGGRKRIKK 439          
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: A0A7S2CP46_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP46_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.340e-58
Identity = 103/201 (51.24%), Postives = 146/201 (72.64%), Query Frame = 1
Query:  136 LAAQVVRREEEMTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDDDSVKVEDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRRKK 738
            + A+ +RR+EE  ENH+  N+S+ + P D DDLD+ +A+E WKVREL RV+++++ R    +E+ +T RRR +TD++R  ED  LGK+  +DKG  KFMQKYYHKGAFYMD+  +  ED VR+R ++  TL+DKFDK  +PK MQVK FG SGQTK+THL ++DTT +D+ W Q+  +      KM+GVG+ID+A ++RKK
Sbjct:   33 MVAEQIRRDEEQVENHVDGNDSDANMPSDTDDLDDPMAYEAWKVRELQRVKRDRDLRLVHEQEKAETERRRGLTDEQRAAEDAALGKNKVEDKGKWKFMQKYYHKGAFYMDETEMDAED-VRKREFDGATLDDKFDKQALPKVMQVKKFGFSGQTKYTHLKDQDTTDFDNPWNQKNQLRANYDSKMAGVGDIDSAGRKRKK 232          
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: A0A7S2SCR4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCR4_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.160e-55
Identity = 110/248 (44.35%), Postives = 158/248 (63.71%), Query Frame = 1
Query:    1 VLKPVFVPKARRETAVERARLEXXXXXXXXXXXXXXXXXXXXXXXLAAQVVRREEE--MTENHL--GDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDDDSVKVEDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRR 732
            +LKPVFVP+ +R T  ER   E                       + A+ VRRE++  M E     G N+S+   P D DD D+ + F  W++RE+ RV+++ + R +   ++ +T RRRN+TD ER  ED  LGK+  KDK   +FMQKYYHKGAFYMDD+++  ++DVR+RSY   TLEDKFDK  +PK +QVK FG +G+TK+THLA++DTT W++ W Q++++  K   K+SGVG+ID A ++R
Sbjct:   54 LLKPVFVPRTKRGTVAEREMQEKREASRQLIHEAALEQRKIETRNMVAEQVRREDDEGMLEPGSIGGGNDSDAGMPSDTDDADDPVVFASWRLREIQRVKRDVDARRAFDLDKAETERRRNLTDAERAAEDAALGKNAEKDKEKWRFMQKYYHKGAFYMDDETMD-KNDVRKRSYGEATLEDKFDKQALPKVLQVKKFGFAGRTKYTHLADQDTTDWNNPWMQKSNLREKYDSKLSGVGDIDRAGRKR 300          
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: A0A5D6XW28_9STRA (MFAP1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW28_9STRA)

HSP 1 Score: 192 bits (489), Expect = 5.200e-55
Identity = 123/246 (50.00%), Postives = 169/246 (68.70%), Query Frame = 1
Query:    1 VLKPVFVPKARRETAVERARLEXXXXXXXXXXXXXXXXXXXXXXXLAAQVVRREEEMTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDDDSVKVEDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRRKK 738
            +LKPVFVPK  RET   +    XXXXXXX          XXXXXXL A+ +RRE+E  E   G   ++ + PDD D +D    + +W++RE+ R++++++ +E   +E E+ LRRRNMT++ER+ ED  L K V  +K   KFMQKY+HKG FY+D+ SVK +DDVRRR  +  TLEDKF+K  +PK MQVKNFGRSGQTK+THLA++DT+  DS WA+   +  K ++K+SGV +I+ + KRRKK
Sbjct:  237 LLKPVFVPKKARETLKRQEXXXXXXXXXXQLEAARLESRXXXXXXLVAEEIRREQE--EGDAGGGATDVEMPDDTDGVDPAQEYRDWELREMRRIKRDRDRKEQKRQEAEEILRRRNMTEEERQAEDRKLKKDVRTEKAKWKFMQKYHHKGVFYVDETSVKDKDDVRRRDVSGATLEDKFNKEMLPKVMQVKNFGRSGQTKYTHLADQDTSHRDSLWARNDSIREKFKNKLSGVRDIEGSLKRRKK 480          
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: UPI00053C8333 (microfibrillar-associated protein 1-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C8333)

HSP 1 Score: 172 bits (436), Expect = 1.250e-47
Identity = 102/238 (42.86%), Postives = 144/238 (60.50%), Query Frame = 1
Query:    1 VLKPVFVPKARRETAVERARLEXXXXXXXXXXXXXXXXXXXXXXXLAAQVVRREEEMTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDD-DSVKVE---DDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGV 702
            ++KPVFVPKA R+T  ER RLE                       +  + VR++EE+ +N   D  +  D  D DD+++E   +E WK RE++R+++E++ RE+ +KERE+  + RNMT+ ERR  +    K  G  K   KFMQKYYHKGAF+  D D V      DD+ +R ++APT ED+ D++ +PK MQVK+FGRSG+TKWTHL NEDTT W+S W     +  K   KM+G+
Sbjct:  180 MVKPVFVPKAERDTIAERERLEAEERALEELAKRKLEIRKKETKQIVVEEVRKDEEIQKNMEMDEANIADV-DTDDEMNEAEEYEVWKTREIARIKRERDAREAMVKEREEIEKLRNMTEQERREWERKNPKPAGPQKQKWKFMQKYYHKGAFFQSDVDDVAASVGTDDIFQRDFSAPTGEDRLDRSILPKVMQVKHFGRSGRTKWTHLVNEDTTDWNSPWTSNDPLRDKYNSKMAGM 416          
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: D5A929_PICSI (MFAP1 domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5A929_PICSI)

HSP 1 Score: 167 bits (422), Expect = 1.830e-47
Identity = 98/238 (41.18%), Postives = 145/238 (60.92%), Query Frame = 1
Query:    1 VLKPVFVPKARRETAVERARLEXXXXXXXXXXXXXXXXXXXXXXXLAAQVVRREEEMTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMD--DDSVKV--EDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGV 702
            ++KPVFVPKA R+T  ER RLE                       +  + +R++EE+ +N     E  G   D DD+++E   +E WK RE++R+++++++RE+ +KE+E+  + RNM +DERR  +    K + + K   KFMQKY+HKGAF+    DD V    EDD+ +R +++PT EDK DKT +PK MQVK+FGRSG+TKWTHL  EDTT W++ W     +  K   KM+G+
Sbjct:    1 MIKPVFVPKAERDTIAERERLEAEEKALEEAMKKRLEERKVETKQILVEEIRKDEEIQKNLEA--EGNGGEIDTDDEINEAEEYEAWKAREIARIKRDRDDREAMLKEKEEIEKVRNMAEDERREWERKNPKSLPQPKQKWKFMQKYFHKGAFFQTPADDHVATAGEDDIFKRDFSSPTGEDKMDKTILPKVMQVKHFGRSGRTKWTHLVAEDTTDWNNPWTYNDPLRAKYNTKMAGM 236          
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: A0A397G0I3_9GLOM (MFAP1 domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G0I3_9GLOM)

HSP 1 Score: 169 bits (427), Expect = 4.180e-46
Identity = 103/249 (41.37%), Postives = 146/249 (58.63%), Query Frame = 1
Query:    1 VLKPVFVPKARRETAVERARLEXXXXXXXXXXXXXXXXXXXXXXXLAAQVVRREEEMTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGK--HVGKDKGTIKFMQKYYHKGAFYMDDDSVKVEDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGV-GNIDAAFKRRKK 738
            +LKPVF+PKA RET +ER R+E                       + A VV++E++        N       DD D +DE+  +E WK+REL R++ ++EER +  KERE+  RRRNM++++R  EDM   K     K KG   F+QKYYHKGAFY+D D     +D+ +R Y APT ++   K  +PK MQVKNFGR+GQTKWTHLA++DTT+ D+ W+Q T +      K+ G+ G  D    +++K
Sbjct:  216 LLKPVFIPKAHRETILERERIEKLAEEAETMKLLEREERKQESHMMVASVVQKEKQKAVEEEASNRE----VDDIDGIDEQAEYEAWKLRELKRIKTDREERRAREKEREEIERRRNMSEEQRMKEDMKYVKSQREEKTKGKYMFLQKYYHKGAFYLDKD-----EDIFKRDYAAPTPDEAVHKEVLPKVMQVKNFGRAGQTKWTHLADQDTTKKDAVWSQNTPINKSTTSKLGGLHGGFDKPTSKKRK 455          
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: A0A3M6V8B9_9STRA (MFAP1 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8B9_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.230e-45
Identity = 118/267 (44.19%), Postives = 167/267 (62.55%), Query Frame = 1
Query:    4 LKPVFVPKARRETAVERARLEXXXXXXXXXXXXXXXXXXXXXXXLAAQVVRREEEMTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMM----------------------LGKHVGKDKGTIKFMQKYYHKGAFYMDDDSVKVEDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRRKK 738
            +KPVFVPK  R T   +  L       XXXXXXXXXXXXXX   L A+  +RE+     + GD+ ++ + PDD D LD    + +W++RE+ R++++++ +E  +KE E+ LRRRNMT +ER  ED                        L K+  K K  +KFMQKYYHKGAFY+DDDSV  ++DVR+R     TLEDKF+K  +P  MQVKNFGR+G+TK+THLA++DT+  DS WA++  +  K + ++ G+ +ID + KRR+K
Sbjct:  229 MKPVFVPKRARGTIKRQEELAAEEERRXXXXXXXXXXXXXXSRRLVAEDTQREQNGA--NKGDD-TDVEMPDDTDGLDPVQEYRDWELREMRRIKRDRDRKEQRVKEEEEALRRRNMTQEERTAEDAYVLLCNNEEADCDLLRYFLTVSKLKKNEPKQKHKLKFMQKYYHKGAFYVDDDSVGSKNDVRKRDATEATLEDKFNKEMLPTVMQVKNFGRAGRTKYTHLADQDTSSRDSLWARDDGIREKYKSRLGGMKDIDGSTKRRRK 492          
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Match: W4GXR7_9STRA (MFAP1 domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXR7_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.660e-45
Identity = 101/247 (40.89%), Postives = 151/247 (61.13%), Query Frame = 1
Query:    1 VLKPVFVPKARRETAVERARLEXXXXXXXXXXXXXXXXXXXXXXXLAAQVVRREEEMTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDDDSVKVEDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAA-FKRRKK 738
            +LKP+FVPK  R+T  E+                           L A+V+ REE      L D+ ++ + PDD D L  E   ++W++RE+ R++++++ R+   +E  +TLRRR+MTD+ER  ED  LGK   K+K   KF+QKYYHKGAFY+DD S+K + DVRRR  + PTLEDK ++  +P  MQVKNFG+SG+TK+THL ++DTT   +A   +  +  +   K+SG+  I+ A FKR+++
Sbjct:  203 MLKPIFVPKRARDTIREQEEKLRAMEERDQALAERALEKKAESRKLVAEVLLREEGDAAQRLQDDATDSEMPDDTDGLHPEKEQQDWELREMRRLKRDRDARDEREREAAETLRRRHMTDEEREKEDAALGKQTEKEKKKWKFLQKYYHKGAFYVDDKSIKTDTDVRRRDADEPTLEDKTNRENLPTVMQVKNFGKSGRTKYTHLTDQDTTDHFTALKND-ELRAQYASKLSGLKPINPAPFKRQRR 448          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig126.1991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYL5_ECTSI2.150e-13098.97MFAP1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2CMS0_9STRA3.300e-6146.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2CP46_9STRA1.340e-5851.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SCR4_9STRA2.160e-5544.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5D6XW28_9STRA5.200e-5550.00MFAP1 domain-containing protein n=1 Tax=Pythium br... [more]
UPI00053C83331.250e-4742.86microfibrillar-associated protein 1-like n=2 Tax=T... [more]
D5A929_PICSI1.830e-4741.18MFAP1 domain-containing protein n=1 Tax=Picea sitc... [more]
A0A397G0I3_9GLOM4.180e-4641.37MFAP1 domain-containing protein n=1 Tax=Diversispo... [more]
A0A3M6V8B9_9STRA2.230e-4544.19MFAP1 domain-containing protein n=2 Tax=Peronospor... [more]
W4GXR7_9STRA2.660e-4540.89MFAP1 domain-containing protein n=10 Tax=Aphanomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig126contigE-fasciculatus_F_contig126:28535..30938 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.0
Seed ortholog evalue1.4e-104
Seed eggNOG ortholog2880.D7FYL5
Preferred nameMFAP1
KEGG koko:K13110
GOsGO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0001527,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007346,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010389,GO:0010467,GO:0010468,GO:0010564,GO:0016070,GO:0016071,GO:0019219,GO:0019222,GO:0031012,GO:0031323,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043484,GO:0044237,GO:0044238,GO:0044420,GO:0044421,GO:0044424,GO:0044464,GO:0046483,GO:0048024,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051726,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0099080,GO:0099081,GO:0099512,GO:1901360,GO:1901987,GO:1901990,GO:1902749,GO:1903311
EggNOG free text desc.RNA splicing
EggNOG OGsKOG1425@1,KOG1425@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Hectar predicted targeting categoryother localisation
Exons6
Model size753
Cds size753
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig126.1991.1prot_E-fasciculatus_F_contig126.1991.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig126 28535..30938 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927768.4632676-CDS-E-fasciculatus_F_contig126:28534..287171622927768.4632676-CDS-E-fasciculatus_F_contig126:28534..28717Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 28535..28717 -
1695995685.550736-CDS-E-fasciculatus_F_contig126:28534..287171695995685.550736-CDS-E-fasciculatus_F_contig126:28534..28717Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 28535..28717 -
1622927768.481271-CDS-E-fasciculatus_F_contig126:28921..290261622927768.481271-CDS-E-fasciculatus_F_contig126:28921..29026Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 28922..29026 -
1695995685.5623522-CDS-E-fasciculatus_F_contig126:28921..290261695995685.5623522-CDS-E-fasciculatus_F_contig126:28921..29026Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 28922..29026 -
1622927768.5019886-CDS-E-fasciculatus_F_contig126:29461..296051622927768.5019886-CDS-E-fasciculatus_F_contig126:29461..29605Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 29462..29605 -
1695995685.5723484-CDS-E-fasciculatus_F_contig126:29461..296051695995685.5723484-CDS-E-fasciculatus_F_contig126:29461..29605Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 29462..29605 -
1622927768.523721-CDS-E-fasciculatus_F_contig126:29776..298571622927768.523721-CDS-E-fasciculatus_F_contig126:29776..29857Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 29777..29857 -
1695995685.5824878-CDS-E-fasciculatus_F_contig126:29776..298571695995685.5824878-CDS-E-fasciculatus_F_contig126:29776..29857Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 29777..29857 -
1622927768.5391593-CDS-E-fasciculatus_F_contig126:30458..305901622927768.5391593-CDS-E-fasciculatus_F_contig126:30458..30590Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 30459..30590 -
1695995685.5919871-CDS-E-fasciculatus_F_contig126:30458..305901695995685.5919871-CDS-E-fasciculatus_F_contig126:30458..30590Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 30459..30590 -
1622927768.5531232-CDS-E-fasciculatus_F_contig126:30830..309381622927768.5531232-CDS-E-fasciculatus_F_contig126:30830..30938Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 30831..30938 -
1695995685.6020374-CDS-E-fasciculatus_F_contig126:30830..309381695995685.6020374-CDS-E-fasciculatus_F_contig126:30830..30938Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig126 30831..30938 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig126.1991.1

>prot_E-fasciculatus_F_contig126.1991.1 ID=prot_E-fasciculatus_F_contig126.1991.1|Name=mRNA_E-fasciculatus_F_contig126.1991.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=251bp
VLKPVFVPKARRETAVERARLEKEEKEKEQKRNTEKENRKRETRQLAAQV
VRREEEMTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKE
ERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHK
GAFYMDDDSVKVEDDVRRRSYNAPTLEDKFDKTQMPKPMQVKNFGRSGQT
KWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRRKKKNPE
*
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mRNA from alignment at E-fasciculatus_F_contig126:28535..30938-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig126.1991.1 ID=mRNA_E-fasciculatus_F_contig126.1991.1|Name=mRNA_E-fasciculatus_F_contig126.1991.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2404bp|location=Sequence derived from alignment at E-fasciculatus_F_contig126:28535..30938- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGCTGAAGCCCGTATTCGTTCCGAAGGCAAGACGAGAGACGGCCGTGGA AAGGGCCAGGCTGGAAAAAGAAGAGAAGGAAAAGGAGCAGAAGAGAAATA CCGAGAAGGTGACAGACGGACTCAAGAAGACGTGCTGTTGCGGGCGATAG TCCGCACGCACTTGTTTTTTTCAGAGATGGCAGTAAAAATCATGGCGCGA GAGGGAGAGAGCTAGCAAGTCGGACTCTAGGGCTGCGGGCTGGTGTATCC CGCGTCGAGCTGCATGTGAACATGTTTGTCGTGCACGATCTGTGTGGAGT CCCCTCACACTGTTTGCTGTGGTGCTGCAATCGACCAATCGACCACAGGA AAACCGGAAACGGGAGACGAGACAACTGGCCGCACAAGTAGTTCGGCGAG AGGAGGAGATGACGGAAAACCACCTTGGCGACAACGAAAGCGAAGGCGAC GCCCCAGACGACGATGACGACCTAGACGAGGTGTGACGGGATGATGATGG TGATGAAAAACACGCCCATCAGCCTGGCTATCCTTTGTTGCTTGTGACGG CCCGGGCAGTAGACGCGTGTTAAGCCTTGTGCGATCTCCGTGTGTTCGGC GCCTGTCTCGCAACTGCTGTGAGAGAGGTAGAAGCGAAAAGGGGCAGATG AGTCGCGGGTCGTCTCCGATATCACTGGAGGGGAGGTGTTGCTGCAGAGC CCAACCTTGCACTACGGTATGTAGCCTGAACTTGCTCCTTGAAGGTGCCN NNNNNNNNNGGGGGGGGGGGGGGGGGGGGTCGCTGTGAAACCTCTTCGTT GTGAGCGGATTCACATAATGCGCGCGCCTCTTGTTCCGTGGATGTCCATG GGAAGCTATCGATGGGATAGTTGATTGGTGCTTAACGAAGCCCTTGGTGT AAACCCTGATGCAGCGACAACTGACGATGGAGTTCGCTTGAAGAGGGTTT GCGGCTCACCTCAGTCGCTTGCTTGCAGCGTTATGGCTCACACGGCAACC CCTGTTCCGTGCTTGCGGCTATCCTTGAACCTGCCCTTGAATTTTCCTCT GTCGGGCGTATTTGTGGCAATATATTCACAGGAGTTGGCGTTCGAGGAAT GGAAAGTTCGCGAGCTGAGCCGGGTTAGAAAAGAGAAGGAAGAGCGCGAA AGCGCGATTAAGGTGGGTCATGTTGTTTGCGGTGACAGGTGTGTGTGTGT GTGTCTCATGTCATGCTTCCCTTCGTTGAGAAAATAGTTGTCGAACCAAA AAGACACGATAAGTTCGACGTTCTCGCACCATGGGGGAGGTAGTCCTGGC TGATTCGAGAGCTGCTCATCCTTGCACATTCAGGAGCGTGAGGACACCCT CAGGAGGCGGAACATGACGGACGATGAGCGCCGGATGGAGGACATGATGC TCGGGAAACACGTCGGGAAAGACAAAGGCACCATCAAGTTCATGCAAAAG TACTACCACAAGGGCGCCTTCTACATGGTAAGGAGTCTCGTTTTCAAGTT AACCGGTTGTGTGGCCACCGGGGCGGTGTTTTGTATCATCGCTTCCTTGT TACACTTGGCGTACTTCGGAATGACAGGTAACGTCGCGCTCATCTTTCCA ACTGGTGTCGAAACGGCATACTTCGAAGTATGCAGTGGTGTAAGATTAAG TTTGGTAAGCACACAAGAGTGACGTCAAAAGTGTAAGGTAGCCAGCACAC ATGAGTGTCATGAGCTGGCGAGACTCTCTAATCACTTGCCTATACCAACG ACGACCTTTTGAGTGCCGGTGTGCTTGTTCTGTTCGACAGTCGAGTACGA CATCGTATTTTTGTTTTTTTCTCGTGCCTCGGAACGCCCGCAATGTCGCC CACAATGATATTCCATACAAATACCCACGTGACTTTCTCCTCTACCTGAC CTTGTCTGCCAGGACGACGATTCGGTCAAGGTGGAGGACGACGTGCGGCG GCGGAGCTACAACGCGCCTACCCTGGAAGACAAGTTCGACAAAACGCAGA TGCCGAAGCCTATGCAGGTGAGCCTCACTCTTGATTGTTCAACATCCCCC TAGTTAAAATGTGCTGTAGCGGTGTAATGTTATGATCTGTCGTCCCATTG GTGTCAAACCCAACCGTTCGCAGATCCCGCAGAATCAGAGAGGCCCTGTG AGCTCGAACACAAGTCCCTTTGTCTCCTCAGATCTGTTTTCGTTTTCCCT TTTTTTTTGTCGCCTCGTCAGGTCAAAAACTTCGGGCGGTCCGGGCAGAC CAAGTGGACTCACTTGGCCAACGAAGACACCACGCAGTGGGACTCGGCGT GGGCGCAAGAAACGCACGTGGCGACCAAAATGCAGCACAAAATGTCCGGG GTCGGGAATATCGACGCCGCTTTCAAGCGTCGAAAGAAGAAGAACCCGGA GTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig126:28535..30938-

>mRNA_E-fasciculatus_F_contig126.1991.1 ID=mRNA_E-fasciculatus_F_contig126.1991.1|Name=mRNA_E-fasciculatus_F_contig126.1991.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1506bp|location=Sequence derived from alignment at E-fasciculatus_F_contig126:28535..30938- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGCTGAAGCCCGTATTCGTTCCGAAGGCAAGACGAGAGACGGCCGTGGA
AAGGGCCAGGCTGGAAAAAGAAGAGAAGGAAAAGGAGCAGAAGAGAAATA
CCGAGAAGGTGCTGAAGCCCGTATTCGTTCCGAAGGCAAGACGAGAGACG
GCCGTGGAAAGGGCCAGGCTGGAAAAAGAAGAGAAGGAAAAGGAGCAGAA
GAGAAATACCGAGAAGGAAAACCGGAAACGGGAGACGAGACAACTGGCCG
CACAAGTAGTTCGGCGAGAGGAGGAGATGACGGAAAACCACCTTGGCGAC
AACGAAAGCGAAGGCGACGCCCCAGACGACGATGACGACCTAGACGAGGA
AAACCGGAAACGGGAGACGAGACAACTGGCCGCACAAGTAGTTCGGCGAG
AGGAGGAGATGACGGAAAACCACCTTGGCGACAACGAAAGCGAAGGCGAC
GCCCCAGACGACGATGACGACCTAGACGAGGAGTTGGCGTTCGAGGAATG
GAAAGTTCGCGAGCTGAGCCGGGTTAGAAAAGAGAAGGAAGAGCGCGAAA
GCGCGATTAAGGAGTTGGCGTTCGAGGAATGGAAAGTTCGCGAGCTGAGC
CGGGTTAGAAAAGAGAAGGAAGAGCGCGAAAGCGCGATTAAGGAGCGTGA
GGACACCCTCAGGAGGCGGAACATGACGGACGATGAGCGCCGGATGGAGG
ACATGATGCTCGGGAAACACGTCGGGAAAGACAAAGGCACCATCAAGTTC
ATGCAAAAGTACTACCACAAGGGCGCCTTCTACATGGAGCGTGAGGACAC
CCTCAGGAGGCGGAACATGACGGACGATGAGCGCCGGATGGAGGACATGA
TGCTCGGGAAACACGTCGGGAAAGACAAAGGCACCATCAAGTTCATGCAA
AAGTACTACCACAAGGGCGCCTTCTACATGGACGACGATTCGGTCAAGGT
GGAGGACGACGTGCGGCGGCGGAGCTACAACGCGCCTACCCTGGAAGACA
AGTTCGACAAAACGCAGATGCCGAAGCCTATGCAGGACGACGATTCGGTC
AAGGTGGAGGACGACGTGCGGCGGCGGAGCTACAACGCGCCTACCCTGGA
AGACAAGTTCGACAAAACGCAGATGCCGAAGCCTATGCAGGTCAAAAACT
TCGGGCGGTCCGGGCAGACCAAGTGGACTCACTTGGCCAACGAAGACACC
ACGCAGTGGGACTCGGCGTGGGCGCAAGAAACGCACGTGGCGACCAAAAT
GCAGCACAAAATGTCCGGGGTCGGGAATATCGACGCCGCTTTCAAGCGTC
GAAAGAAGAAGAACCCGGAGTAGGTCAAAAACTTCGGGCGGTCCGGGCAG
ACCAAGTGGACTCACTTGGCCAACGAAGACACCACGCAGTGGGACTCGGC
GTGGGCGCAAGAAACGCACGTGGCGACCAAAATGCAGCACAAAATGTCCG
GGGTCGGGAATATCGACGCCGCTTTCAAGCGTCGAAAGAAGAAGAACCCG
GAGTAG
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