mRNA_E-fasciculatus_F_contig126.1989.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig126.1989.1 vs. uniprot
Match: D7FYL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL7_ECTSI) HSP 1 Score: 533 bits (1373), Expect = 2.960e-184 Identity = 304/346 (87.86%), Postives = 311/346 (89.88%), Query Frame = 3
Query: 222 STPGKEAGDVATALDAALQNEALEDQVQAFQEALEVKEERLRTIAGELTAARRELERAKKSAKFDLVAAEGRTKKLGILEHTVATLRHDLHTNVERRQKVEEKVEKLERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAEDVEGKWLKSEKRAQLLEEKVEQKTHELESQSRVNAAQAGEIEAXXXXXXLHRKEIFDLKQALLAREGEISTGRSTATDLRRELSRVRREFIMSTSNRSEQQSALLGSRRKGISSQRWRHPDGDSSTKELTAGGGHDLSRKENSRALQKTRVSWDNAFMTKADQSTETTSDHPSSSGLNKSNARAIAKSMFRHVPESSPP--VGRDN 1253
+TPG E GDVAT L ALQNEALEDQVQAFQEALEVKEERLRTIAGELTAARRELERAKKSAKFDLVAAEGRTKKLGILEHTVATLRHDLHTNVERRQKVEEKV LERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAEDVEG+WL+SEKRAQ+LE KVEQK HELESQSRVNAAQAGEIEA LHRKEIFDLKQ LLAREGEISTG STATDLRRELSRVRREFIMSTSNRSEQQSALLGSRR+GISSQR RHPD DSSTKEL AGGGHDL RKENSRALQK RVSWDN FMTKADQS ET SDH +SSGLNKSNAR I K + RHVP SSPP G DN
Sbjct: 13 NTPGNEDGDVATDLHVALQNEALEDQVQAFQEALEVKEERLRTIAGELTAARRELERAKKSAKFDLVAAEGRTKKLGILEHTVATLRHDLHTNVERRQKVEEKVATLERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAEDVEGRWLESEKRAQVLEVKVEQKIHELESQSRVNAAQAGEIEAQAAEIELHRKEIFDLKQVLLAREGEISTGCSTATDLRRELSRVRREFIMSTSNRSEQQSALLGSRRRGISSQRRRHPDRDSSTKELIAGGGHDLCRKENSRALQKARVSWDNVFMTKADQSAETVSDHRNSSGLNKSNAREIEKPIVRHVPHSSPPGMSGLDN 358
BLAST of mRNA_E-fasciculatus_F_contig126.1989.1 vs. uniprot
Match: A0A6H5JZF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF3_9PHAE) HSP 1 Score: 529 bits (1363), Expect = 5.080e-183 Identity = 319/426 (74.88%), Postives = 328/426 (77.00%), Query Frame = 3
Query: 222 STPGKEAGDVATALDAALQNEALEDQVQAFQEALEVKEERLRTIAGELTAARRELERAKKSAKFDLVAAEGRTKKLGILEHTVATLRHDLHTNVERRQKVEEKVEKLERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAEDVEGKWLKSEKRAQLLEEKVEQKTHELESQSRVNAAQAGEIEAXXXXXXLHRKEIFDLKQALLAREGEISTGRSTATDLRRELSRVRREFIMSTSNRSEQQSALLGSRRKGISSQRWRHPDGDSSTKELTAGGGHDLSRKENSRALQKTRVSWDNAFMTKADQSTETTSDHPSSSGLNKSNARAIAKSMFRHVPESSPPVGRDNTPS-ADANLDGTGRNEQALQ-SKRGHKPISPGSTLLVAGSLFIGNGLGVKKAPTAFSGGSAKDMLKKIMEGHALHASLQEAE 1493
+TPG E G VAT L ALQNEALE+QVQAFQEALEVKEERLRTI G LTA R+ELERAKKSAKFDLVAAEGRTKKLGILEHTVATL HDL TNVERR WL+SEKRAQ+LEEKVEQK HELESQSRVNAAQAGEIEA HRKEI DLKQ EGEISTGRSTATDLRRELSRVRREFIMSTSNRSEQQSALLGSRRKGISSQR RHPD DSSTKEL AGGGHDL RKENSRALQK RVSWDN FMTK DQS ET SDH S+SGLNKSNAR I K +FRHV SSPPVGRDNT S ADANLDGTGR EQALQ S+RGHKPI PGSTLLVAGSLFIGNGLGVKKAPTAFSGGSAKDMLK IMEGHAL QEA+
Sbjct: 13 NTPGNEDGGVATDLHVALQNEALENQVQAFQEALEVKEERLRTITGMLTATRKELERAKKSAKFDLVAAEGRTKKLGILEHTVATLHHDLQTNVERR------------------------------------------------WLESEKRAQVLEEKVEQKIHELESQSRVNAAQAGEIEAQAAEIEFHRKEILDLKQ-----EGEISTGRSTATDLRRELSRVRREFIMSTSNRSEQQSALLGSRRKGISSQRRRHPDRDSSTKELVAGGGHDLCRKENSRALQKARVSWDNVFMTKEDQSAETVSDHRSNSGLNKSNAREIEKPIFRHVSHSSPPVGRDNTTSSADANLDGTGRKEQALQQSRRGHKPIPPGSTLLVAGSLFIGNGLGVKKAPTAFSGGSAKDMLKNIMEGHAL----QEAD 381
BLAST of mRNA_E-fasciculatus_F_contig126.1989.1 vs. uniprot
Match: A0A835YZX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX7_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 3.930e-5 Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = 3
Query: 387 ERAKKSAKFDLVAAEGRTKKLGILEHTVATLRHDLHTNVERRQKVEEKVEKLERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAEDVEGK 656
ERA +AK+D +A E +KL + EH V + ++ R ++ + L+R+WQ+ER+ RLQDLHRH A+S++ + A D E +
Sbjct: 64 ERALNNAKYDQMAREAHARKLILAEHEVGGAKAEIEELRTRITALQSEARALQRAWQDERAQRLQDLHRHAALSAEAERLRGAARDAEAR 153 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig126.1989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig126.1989.1 >prot_E-fasciculatus_F_contig126.1989.1 ID=prot_E-fasciculatus_F_contig126.1989.1|Name=mRNA_E-fasciculatus_F_contig126.1989.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=432bp MANTRSTPGKEAGDVATALDAALQNEALEDQVQAFQEALEVKEERLRTIAback to top mRNA from alignment at E-fasciculatus_F_contig126:17432..22017- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig126.1989.1 ID=mRNA_E-fasciculatus_F_contig126.1989.1|Name=mRNA_E-fasciculatus_F_contig126.1989.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4586bp|location=Sequence derived from alignment at E-fasciculatus_F_contig126:17432..22017- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig126:17432..22017- >mRNA_E-fasciculatus_F_contig126.1989.1 ID=mRNA_E-fasciculatus_F_contig126.1989.1|Name=mRNA_E-fasciculatus_F_contig126.1989.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2592bp|location=Sequence derived from alignment at E-fasciculatus_F_contig126:17432..22017- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |