prot_E-fasciculatus_F_contig1259.1978.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1259.1978.1
Unique Nameprot_E-fasciculatus_F_contig1259.1978.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length290
Homology
BLAST of mRNA_E-fasciculatus_F_contig1259.1978.1 vs. uniprot
Match: A0A6H5L1F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F3_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 6.350e-52
Identity = 126/296 (42.57%), Postives = 160/296 (54.05%), Query Frame = 0
Query:    5 PLASEWWPLEENLVARGGGSPLHLFEGSEGYPFPEXXXXXXXXXXXXXXXXXXXFVSQFGPDQEPGLFS-EGANRVGAASPSSSAAADVAFLRGLDVDGLTASKAACDEPVRRFMVSPATATPGGSNEGRHPPYDDSYLPTPATLIADLKATASFCSDITDLDNDGSRGPLPFVKPSEWGM-DEMHEDANQQSIFSTPEELAEE-----------ELEEEQFPGIDCREFHPRSIAVHAALKQYVLNQRVFFVVVHTGRWVDEELPEYPMSTHELVMALGVSGAAGNLVGVMAIQT 287
            P +  WWPLEE+  ARG   P++ F                               SQF  + E  LF+ +G +     + S    ADV FLRGL++ GL A  AA   P+RRFMVSPA        + R   YD+  LPTPATL+ADLKAT +F S ITD+D+DGS  PLP++    +   DE+HED   Q IF+T E+LAE            E +E        RE   RS A   ALKQYVL QRVF+V++HT R  D EL +  MS+  +++ALGVS A GNLVGV+AIQT
Sbjct:   20 PPSPTWWPLEESFTARGRRLPIYTF------------------------------ASQFAGEHELVLFNGDGNDDQNREALSPEQVADVDFLRGLNLQGLEAGGAAT-APLRRFMVSPAXXXXXXXKKSR---YDEDNLPTPATLVADLKATGNFKSAITDMDDDGSGAPLPYLGYLVFACADEVHEDDENQYIFATSEDLAEAIAEAESEVVDPEADEGDMGAEAYREMTLRSRAQLTALKQYVLKQRVFYVLIHTDRRHDAELADKDMSSDVILLALGVSPATGNLVGVIAIQT 281          
BLAST of mRNA_E-fasciculatus_F_contig1259.1978.1 vs. uniprot
Match: A0A6H5LG80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG80_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.740e-23
Identity = 79/226 (34.96%), Postives = 106/226 (46.90%), Query Frame = 0
Query:  118 MVSPATATPGGSNEGRHPPYDDSYLPTPATLIADLKATASFCSDITDLDNDGSRGPLPFVKPSEWGM-DEMHEDANQQSIFSTPEELAEEELEEEQFPGIDCR--------------------------------------------------------EFHPRSIAVHAALKQYVLNQRVFFVVVHTGRWVDEELPEYPMSTHELVMALGVSGAAGNLVGVMAIQ 286
            MVSPA A  GG  + R   YD+  LPTPATL+ADLK   +F S ITD+D+DGS  PLP++    +   DE+HED   Q IF+T   LA E + EE+   +D                                                          E    S A   ALKQ+VL +RVF+V++   R    +  +  MS+  +++A+GVS A GNLVGV+AIQ
Sbjct:    1 MVSPAAAAAGGGKKSR---YDEDNLPTPATLVADLKEARNFKSAITDMDDDGSGAPLPYLGYLVFACADEVHEDDENQYIFATSRGLA-EAISEEESEVVDVEADEGDMGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGEIALGSRAQLTALKQHVLKRRVFYVLIRADRRQYADPDDEDMSSDVILLAMGVSPATGNLVGVIAIQ 222          
BLAST of mRNA_E-fasciculatus_F_contig1259.1978.1 vs. uniprot
Match: A0A1X6NUI1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUI1_PORUM)

HSP 1 Score: 65.5 bits (158), Expect = 7.090e-9
Identity = 65/200 (32.50%), Postives = 94/200 (47.00%), Query Frame = 0
Query:   89 AADVAFLRGLDVDGLTASKAACDEPVRRFMVSPATATPGGSNEGRHPPYDDSYLPTPATLIADLKATASFCSDITDLDNDGSRGP-LPFVKPSEWGMDEMHEDANQQSIFST-PEELAEEELEEEQFPGIDCREFHPRSIAVHAALKQYVLNQRVFFVVVHTGRWVDEELPEYPMSTHELVMALGVSGAAGNLVGVMAIQ 286
            AADVAFLR   +         C     +  +SP  A P         P+    LPT A ++ADL       + +  +  D    P +P   P   G D++H +  +Q +F T P E+    ++EE  PG+        SI    AL+ YV+++ V+FVVVHT     EE   +P     L+ A+GVS A+GNLVG   +Q
Sbjct:   53 AADVAFLRSWALPD------ECHYGNPQVGMSPFIAEPAVR------PHSVG-LPTAAEVLADL--LVDNFAGLPGVALDTVDPPFVPKADPMVTGADQIHTNGIKQYMFCTEPVEVVPYGVQEEDLPGMQA------SIDALDALRSYVVDRHVYFVVVHTPLVGQEE---FPFPNLVLLWAVGVSPASGNLVGAWGVQ 228          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1259.1978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L1F3_9PHAE6.350e-5242.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LG80_9PHAE2.740e-2334.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X6NUI1_PORUM7.090e-932.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1259contigE-fasciculatus_F_contig1259:571..1440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1259.1978.1mRNA_E-fasciculatus_F_contig1259.1978.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1259 494..2648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1259.1978.1 ID=prot_E-fasciculatus_F_contig1259.1978.1|Name=mRNA_E-fasciculatus_F_contig1259.1978.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=290bp
MSQLPLASEWWPLEENLVARGGGSPLHLFEGSEGYPFPEWVPSFGSLCVE
GSGSPIYTFVSQFGPDQEPGLFSEGANRVGAASPSSSAAADVAFLRGLDV
DGLTASKAACDEPVRRFMVSPATATPGGSNEGRHPPYDDSYLPTPATLIA
DLKATASFCSDITDLDNDGSRGPLPFVKPSEWGMDEMHEDANQQSIFSTP
EELAEEELEEEQFPGIDCREFHPRSIAVHAALKQYVLNQRVFFVVVHTGR
WVDEELPEYPMSTHELVMALGVSGAAGNLVGVMAIQTDD*
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