prot_E-fasciculatus_F_contig12586.1977.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12586.1977.1
Unique Nameprot_E-fasciculatus_F_contig12586.1977.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length585
Homology
BLAST of mRNA_E-fasciculatus_F_contig12586.1977.1 vs. uniprot
Match: A0A6H5L2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2M3_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 3.580e-53
Identity = 226/401 (56.36%), Postives = 236/401 (58.85%), Query Frame = 0
Query:    1 GEAEPEGVRGAVEGGDAGGSXXXXXXXXXXXXXXXXXXQPSAISGESXXXXXXXXXXXDVDGAVRPEPLGQEIEGVGDGVVEAVESGGHVPDAGVGVGAPTQAGHAGAAALRPEHGXXXXXXXXXXXXXXXXXATPPAEPLARPMPAAADGGA-GVDDGSGGARSGSDSKGMAEVESVGVGSADETPISENA--------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDGTGDDVEGGGQETGDV-----TSPLQAEGEASPPPTLGEDEGGVGDGG---QPAAGSGQDSPGRQPAXXXXXXXXXXXXXXXXXXXXXXXARS----GQQIDGTDGGGPGEGGRTLE 368
            GEAEPE  RGAV+ GDAG S                  Q SAISGES    XXX    DVDGAV  EPLGQE+EGVGDGVVEAV SGGHVPDAGVGVGA TQAGHA AAALRPEHG                  TPPAEP+A PMPAA DG A GV DGS G+R GSDS+G AEVE  GVGS DETP+SENA                                                         XXXXXXXXXXXXXXXXXXXXXXXXXX      AVD TGD+VEGGGQ T        + PL+AEGEASP PTLGE+EG         Q  AG GQDSPGR P XXXXXXXXXXXXXXXXXXXXXXX       GQQ DGTDG GP EG RTLE
Sbjct:  169 GEAEPEAARGAVDDGDAGRSWEGGAAAAAVAEASAAGGQRSAISGESEDGSXXXG---DVDGAVGSEPLGQEVEGVGDGVVEAVASGGHVPDAGVGVGATTQAGHADAAALRPEHGPGGGQGVSPPEAEGDVGTTPPAEPVAGPMPAAEDGAAAGVGDGSEGSRGGSDSEGGAEVEGAGVGSTDETPVSENADAAEAAGAVVLTSAPRETLAPAASAEGGSSAAVPEGPTATRASGGSQPGSESDGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXKENAGGAVDRTGDEVEGGGQGTSQAGLSVPSPPLEAEGEASPAPTLGEEEGXXXXXXXXXQLPAGWGQDSPGRPPXXXXXXXXXXXXXXXXXXXXXXXXXEEADGLGQQSDGTDGVGPEEGARTLE 566          
BLAST of mRNA_E-fasciculatus_F_contig12586.1977.1 vs. uniprot
Match: D8LQX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX8_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 4.560e-23
Identity = 236/619 (38.13%), Postives = 249/619 (40.23%), Query Frame = 0
Query:    1 GEAEPEGVRGAVEGGDAGGSXXXXXXXXXXXXXXXXXXQPSAISGESXXXXXXXXXXXDVDGAVRPEPLGQEIEGVGDGVVEAVESGGHVPDAGVGVGAPTQAGHAGAAALRPEHGXXXXXXXXXXXXXXXXXATPPAEPLARPMPAAADGGA-GVDDGSGGARSGSDSKGMAEVESVGVGSADETPISENAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDGTGDDVEGGGQETGDVTSPLQAEGEASPPPTLGEDEGGVGDGGQPAAGSGQDSPGRQPAXXXXXXXXXXXXXXXXXXXXXXXAR----SGQQIDGTDGGGPGEGGRTLEEGEMPAQREXXXXXXXXXGGEGTIVQGDGSSS---------------------------PAEGPAGSAEGVPPDSSDLEVEAAAGVVATGDGEEEEEGEVAADTG--EEGLAEAGGGSADVVVATNSPAGEENTAPAAADAAVDGERGGSHAEEPIEVEASSTSTVPSAVAGGEDPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSEGDIAVEAAAAVGIEDHGSSPVAALDKET 585
            GEAEPE  RGAV+GGDAG S                        GE               GA           GVGDGVVEAV SGGHVPDAGVGVGA TQAGHA AAAL PEHG                 ATPPAEP+ARPMPAAADG A GVDDG        DSKG AE   VG+   +E   +   A                                                                                                                        GQDSPGR   XXXXXXXXXXXXXXXXXXXXXXX      SGQQ DGTDG GP EG RTL++GE      XXXXXXXXX                                         PAEGPAGSAEGVPPDSSDLEVEA                         EEGL+E                         A AA+DGE G   AEEPIE E SS STVP++V GGEDP  XXXXXXXXXXXX                         PS+ D AVEAAAAV IE  GS PVA LDK+T
Sbjct:   86 GEAEPEAARGAVDGGDAGRS------------------------GEG--------------GAAAAAVAEASGAGVGDGVVEAVASGGHVPDAGVGVGASTQAGHADAAALIPEHGPGGGQGVSPPEAEGEVGATPPAEPVARPMPAAADGAAAGVDDGXXXXXXXXDSKGGAEKR-VGLEEEEEERGNSRQAR-----------------------------------------------------------------------------------------------------------------------GQDSPGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNGSGQQSDGTDGVGPEEGARTLDQGEREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEGPAGSAEGVPPDSSDLEVEAXXXXXXXXXXXXXXXXXXXXXXXXXEEGLSEXXXXXXXXXXXXXXXXXXXXXXXXDA-AALDGESGELQAEEPIEGEPSSPSTVPTSVVGGEDPXXXXXXXXXXXXXXEGEEEYPEPEAGADATGAEAA---APSDDDTAVEAAAAVDIEHPGSCPVAPLDKKT 542          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12586.1977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2M3_9PHAE3.580e-5356.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQX8_ECTSI4.560e-2338.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12586contigE-fasciculatus_F_contig12586:3..3751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12586.1977.1mRNA_E-fasciculatus_F_contig12586.1977.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12586 3..3752 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12586.1977.1 ID=prot_E-fasciculatus_F_contig12586.1977.1|Name=mRNA_E-fasciculatus_F_contig12586.1977.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=585bp
GEAEPEGVRGAVEGGDAGGSGEGGAAAAAVAEASGAEGQPSAISGESEDG
GGGGGGGGDVDGAVRPEPLGQEIEGVGDGVVEAVESGGHVPDAGVGVGAP
TQAGHAGAAALRPEHGPGGGQGVSSPEAEGEAGATPPAEPLARPMPAAAD
GGAGVDDGSGGARSGSDSKGMAEVESVGVGSADETPISENAAAAAAAAEA
ASSVAVPEGPEAALASGGSPPGSESGSGGVNDDGVAVAAAVGTEREILDE
EEEDKEEAGGAVDGTGDDVEGGGQETGDVTSPLQAEGEASPPPTLGEDEG
GVGDGGQPAAGSGQDSPGRQPAAAAAAADDAAVQGEEDTAEPPEEARSGQ
QIDGTDGGGPGEGGRTLEEGEMPAQREEDEAGGGGSGGEGTIVQGDGSSS
PAEGPAGSAEGVPPDSSDLEVEAAAGVVATGDGEEEEEGEVAADTGEEGL
AEAGGGSADVVVATNSPAGEENTAPAAADAAVDGERGGSHAEEPIEVEAS
STSTVPSAVAGGEDPTAAAAATATTGEPTEEEEEEDNPEPDAGADTAAAA
AAATPSEGDIAVEAAAAVGIEDHGSSPVAALDKET
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