mRNA_E-fasciculatus_F_contig12584.1976.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A6H5JE56_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE56_9PHAE) HSP 1 Score: 417 bits (1073), Expect = 2.330e-142 Identity = 211/228 (92.54%), Postives = 215/228 (94.30%), Query Frame = 1
Query: 1 IERTP-ASTAAAAARRAPEEGEQVFSLYGHGDGDSSVDTEPLAPPIELSGSVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALLE 681
+ERTP A+T RRAPEE EQVFSLYG DGDS+VD E LAPPIELSG+VLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPK IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGG VFGALLE
Sbjct: 47 MERTPPATTXXXXVRRAPEEDEQVFSLYGRSDGDSNVDAERLAPPIELSGNVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKSIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLE 274
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A836CBY0_9STRA (Indole 2,3-dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY0_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.220e-65 Identity = 111/189 (58.73%), Postives = 131/189 (69.31%), Query Frame = 1
Query: 115 EPLAPPIELSGSVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALLE 681
EP P + LS L LL+ F+VDPVRGFLP DPL RLPQ ELQPWE + + LP+LL+ QAR PL LP L I +L + +R RALLLL + HA VWG P +P +P GIAVPL LAA G+PP++TH SLVL+NW RLDP G L NLA C FLGG DE WFY++TVEIEARGG ALL+
Sbjct: 39 EPRCPLVPLSPDTLQLLEKFEVDPVRGFLPSEDPLLRLPQPELQPWEDLVSDLPALLSAAQARLPLSRLPILPITLLETEPQRRRALLLLSMLCHAFVWGEPARPADALPPGIAVPLWRLAADMGVPPVMTHLSLVLYNWRRLDPRGALDATNLAAACQFLGGHDEAWFYLTTVEIEARGGPAMAALLQ 227
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A482SH81_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SH81_9ARCH) HSP 1 Score: 166 bits (420), Expect = 2.590e-46 Identity = 89/172 (51.74%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 151 VLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLA--VGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGS 660
+ A+L FDVDP+ GFLP DPL+RLP WE +A LP LL +GQAR PLE+LP L D L + RA LLLC+FAHA +WG P IP+GIAVPL ++ G+PP+L H S+VL+NW RLD G + ENL+ +F G DE+WFY+ TVEIEARG +
Sbjct: 126 IRAILKKFDVDPITGFLPTEDPLQRLPYARYHLWEDLADDLPKLLGARLGQARCPLEQLPVLPTDKLITDADLRRAHLLLCLFAHAYIWGG-NTPLDRIPQGIAVPLWEVSEKLGVPPVLGHPSIVLYNWRRLDVNGDICMENLSTLNNFFDGRDESWFYLITVEIEARGAA 296
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A523E1X2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523E1X2_9BACT) HSP 1 Score: 158 bits (399), Expect = 5.040e-43 Identity = 82/178 (46.07%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 148 SVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALLE 681
S+ L ++VDP RGFLP DPL RLP WEA+A+ + LL G+ R+ LE+LPE+ +DVL + E RA+LLLC+F +A VWG E+P G +P+ +AVP +A G PP++ H S+VL NW R+DP GPL +NLA GG DE WFY+ +EARG A+++
Sbjct: 2 SIAEELARYEVDPGRGFLPSCDPLARLPAA-FDAWEAVASQVSELLLAGRLREALEQLPEVDLDVLGRRDELERAMLLLCIFGNAYVWGA-EEPAGALPRAVAVPWCEVADKLGRPPIIAHASIVLRNWRRIDPEGPLTLDNLATLQTMGGGGDEQWFYLIPAAMEARGAEGLIAMMQ 177
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A3L7X5T9_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7X5T9_9CHLR) HSP 1 Score: 158 bits (399), Expect = 6.520e-43 Identity = 87/186 (46.77%), Postives = 110/186 (59.14%), Query Frame = 1
Query: 130 PIELSGSVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQAR--KPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALLE 681
P + + VL L + V RGFLP DPL LPQ WE ++ LP LLA G A + + LP L + L + RA++LL V AHA VW +PEQP+ +P IA+PL ALAA G PPL TH + VLHNW RLDP GP+ N+A C F GGLDE WF++ +E+EARG A L+
Sbjct: 2 PKQRAPFVLPDLAQWQVHAERGFLPDPDPLLELPQAYAA-WERISRELPGLLAAGSAALLRQVSALPTLELSGLQTAPMQNRAMILLTVLAHAFVWADPEQPRKLLPAAIALPLGALAAQLGRPPLCTHATTVLHNWRRLDPDGPIALGNVATLCGFFGGLDEAWFFLVALEVEARGAPAVVASLQ 186
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A2E7A194_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E7A194_9BACT) HSP 1 Score: 151 bits (382), Expect = 1.560e-40 Identity = 81/172 (47.09%), Postives = 105/172 (61.05%), Query Frame = 1
Query: 163 LDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALL 678
L DVDP+RGFLP DPL+RLP R + PWE +A LP+L++ R +EELP L D L + E RA+LLL V A W PE P +P+ I++P + +A P +++H S+VLHNW R+DPAG + +NL F GG DE WFY+ TVEIEARG LL
Sbjct: 9 LAEHDVDPIRGFLPGEDPLQRLPARYV-PWERLAFDLPALVSTHLLRDAIEELPLLDTDALESEAELRRAMLLLSVLGGACAWSRPEPPT-RLPRSISIPWSEVAERLDRPMIISHASIVLHNWRRIDPAGEIVAKNLRTLQCFRGGPDEEWFYLVTVEIEARGARALPLLL 178
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A1F5V0E2_FRAXR (Uncharacterized protein n=1 Tax=Fraserbacteria sp. (strain RBG_16_55_9) TaxID=1817864 RepID=A0A1F5V0E2_FRAXR) HSP 1 Score: 150 bits (379), Expect = 3.280e-40 Identity = 81/164 (49.39%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 187 VRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALL 678
+RGFLP DPL +LP R + W+++ A L +LL G+ R+ LE LP LSI+ L +R RA+L+L V A+A VW + + P IPK IAVPL LA G PP+ T+ S+VL+NW RLD A + NLAC F+GGLDE WFY+ +VEIEA+G AL+
Sbjct: 1 MRGFLPTQDPLEKLP-RFYEVWDSLGADLAALLMTGRLRRALERLPLLSIEKLRNGGQRERAILILSVLANAYVWADAK-PATRIPKSIAVPLCQLAGLVGRPPITTYASIVLNNWRRLDEAESIELSNLACRQLFVGGLDEQWFYLISVEIEAKGAPALSALV 162
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A2D5B492_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5B492_9BACT) HSP 1 Score: 148 bits (374), Expect = 2.350e-39 Identity = 83/175 (47.43%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 151 VLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGAL 675
V+ L +FDVDPVRGFLP VDP RLP PWE +A LP+LL+ G AR + LP L D L R RA+LLL VFA ASV+G E + +P + +P ++ G P ++ H S+VLHNW RLD GP+ +NL F GG DE WFY+ T EIEA G + AL
Sbjct: 6 VIDALRTFDVDPVRGFLPAVDPETRLPA-PFAPWEQLAVDLPALLSTGVARDAVAGLPLLDADSLGSTRSLQRAMLLLSVFASASVFGGAEA-EHRLPPNLCLPWKKVSGRLGRPMIIAHASIVLHNWRRLDMHGPIAADNLRALQCFRGGPDEEWFYLLTAEIEATGAAAIPAL 178
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A3L7XP59_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7XP59_9CHLR) HSP 1 Score: 147 bits (372), Expect = 6.130e-39 Identity = 79/166 (47.59%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 163 LDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQAR--KPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARG 654
L ++V RGFLP DPL LP E W+ + LP LLA G A + + LP L + L RA++LL V AHA VW +P+QP+ +P IA+PL LAA G PPL TH + VLHNW RLDP GP+ N+A F GGLDE WF + T+E+EARG
Sbjct: 13 LAQWEVHAQRGFLPDPDPLLELPP-EYAAWDRINRELPGLLAAGSAAVVRSVSRLPTLELAGLQTAAMHNRAMVLLSVLAHAFVWADPQQPRRLLPAAIALPLGTLAAQLGRPPLCTHATTVLHNWRRLDPDGPIELGNVATLAGFFGGLDEAWFLLVTLEVEARG 177
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Match: A0A388Q5D8_9CHLR (Indoleamine 2,3-dioxygenase 2 n=3 Tax=Anaerolineae TaxID=292625 RepID=A0A388Q5D8_9CHLR) HSP 1 Score: 145 bits (366), Expect = 4.650e-38 Identity = 77/166 (46.39%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 163 LDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQAR--KPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARG 654
L ++V RGFLP DPL LP E WE + LP LLA G + + LP L + L RA++LL V AHA VW +P+QP+ +P IA+PL LAA G PP+ TH + VLHNW RLDP+GP+ N+A F GGLDE WF++ T+ +EARG
Sbjct: 13 LAQWEVHAERGFLPDPDPLLELPP-EYAAWERINRELPGLLAAGSGAMLRSVGRLPVLELAGLQTAPMHNRAMVLLSVLAHAFVWADPQQPRKQLPAAIALPLGTLAAQLGRPPICTHATTVLHNWRRLDPSGPIELGNVATLAGFFGGLDEAWFFLVTLAVEARG 177 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12584.1976.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12584.1976.1 >prot_E-fasciculatus_F_contig12584.1976.1 ID=prot_E-fasciculatus_F_contig12584.1976.1|Name=mRNA_E-fasciculatus_F_contig12584.1976.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=227bp IERTPASTAAAAARRAPEEGEQVFSLYGHGDGDSSVDTEPLAPPIELSGSback to top mRNA from alignment at E-fasciculatus_F_contig12584:927..3572+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12584.1976.1 ID=mRNA_E-fasciculatus_F_contig12584.1976.1|Name=mRNA_E-fasciculatus_F_contig12584.1976.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2646bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12584:927..3572+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12584:927..3572+ >mRNA_E-fasciculatus_F_contig12584.1976.1 ID=mRNA_E-fasciculatus_F_contig12584.1976.1|Name=mRNA_E-fasciculatus_F_contig12584.1976.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1362bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12584:927..3572+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |