prot_E-fasciculatus_F_contig12582.1974.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12582.1974.1
Unique Nameprot_E-fasciculatus_F_contig12582.1974.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length477
Homology
BLAST of mRNA_E-fasciculatus_F_contig12582.1974.1 vs. uniprot
Match: D8LCH4_ECTSI (FH2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH4_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 8.500e-134
Identity = 320/476 (67.23%), Postives = 325/476 (68.28%), Query Frame = 0
Query:    1 VPPEEVELEEGVVQCLMVLFNKETGLSNLEGGSNLWPVIVRSALDSTSERVRSSLLKVLTVMTETGDDGLKVVLNALDVVKAQKNRDLRFSFLVDALSKAAATTTTGDWQGRGGTQPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVFLNTVLSRAFEFEERVLLRGEMVAGGVVAAIAGARERWGEDXXXXXXYSDCGSSVCGAEDGVRDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFVSNTGAAPVFLPLKSPAAGGSTSSLATVTARSSFSSTGSSVPRTLAQLSADVADARLLELRRDLIAQLDLFDRVADEDLRDAEENAGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTESSEPRAVKAMRALAMAVEGDEAVSVELELLADKLRVMGGGGSGGGVGCCGPALWRRVR 476
            VPPEEVELEEGVV+CLMVLFNKETGLSNLEG SNLWPVIVRSALDSTSERVRSSLLKVLTVMTETG DGLKVVLNALDV KAQKN+DLRFS LV ALSKAA          RG TQPGS                                     AVFLNTVLSRAFEFEERVLLRGEMVAGGVVAAIAGARERWGE XXXXXX                 H        XXXXXXXXXXXXXXXXX                      XXX             GVFVSN+G   V +P KSPAAG STSSLATVTARSSFSSTGSSVPRT+AQLSA VADARLLELRRDLIAQLDLFDRVADEDLRDAEEN G                 XXXXXXXXXXXX           TESSEPRAVKAMRALAMAVEGDEAVSVELELLADKLRVMGGGGSGGG GCCGPALWRRVR
Sbjct:  119 VPPEEVELEEGVVRCLMVLFNKETGLSNLEGSSNLWPVIVRSALDSTSERVRSSLLKVLTVMTETGQDGLKVVLNALDVAKAQKNQDLRFSLLVGALSKAAXXXXXXXXXXRG-TQPGSGSSEEEGYGVGGTQPGIRGGGNDGEEDGHLRLALAV-AVFLNTVLSRAFEFEERVLLRGEMVAGGVVAAIAGARERWGEXXXXXXXXXXXXXXXXXXXXXXVHHLRDATALFXXXXXXXXXXXXXXXXXTDFGGNGGSVSKKRVFVPSGSSXXXPAGA---------GVFVSNSGRVSV-VPPKSPAAGSSTSSLATVTARSSFSSTGSSVPRTVAQLSAAVADARLLELRRDLIAQLDLFDRVADEDLRDAEENGG--------TAADKGAGDXXXXXXXXXXXXRGRNQAAGGAATESSEPRAVKAMRALAMAVEGDEAVSVELELLADKLRVMGGGGSGGGTGCCGPALWRRVR 574          
BLAST of mRNA_E-fasciculatus_F_contig12582.1974.1 vs. uniprot
Match: A0A6H5JDW8_9PHAE (FH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW8_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 3.470e-117
Identity = 334/476 (70.17%), Postives = 343/476 (72.06%), Query Frame = 0
Query:    1 VPPEEVELEEGVVQCLMVLFNKETGLSNLEGGSNLWPVIVRSALDSTSERVRSSLLKVLTVMTETGDDGLKVVLNALDVVKAQKNRDLRFSFLVDALSKAAATTTTGDWQGRGGTQPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVFLNTVLSRAFEFEERVLLRGEMVAGGVVAAIAGARERWGEDXXXXXXYSDCGSSVCGAEDGVRDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFVSNTGAAPVFLPLKSPAAGGSTSSLATVTARSSFSSTGSSVPRTLAQLSADVADARLLELRRDLIAQLDLFDRVADEDLRDAEENAGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTESSEPRAVKAMRALAMAVEGDEAVSVELELLADKLRVMGGGGSGGGVGCCGPALWRRVR 476
            VPPEEV+LEEGVVQCLMVLFNKETGLSNLEG S LWPVIVRSALDSTSERVRSSLLKVLTVMTETG DGLKVVLNALDV KA+KN+DLRFS L   +             G  G +                                        AVFLNTVLSRAF+FEERVLLRGEMVAGGVVAAIAGARERWGE XXXXXX                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GVFVSN G   V +P KSPAAG S SSLA+VTARSSFSSTGS VPRT+AQLSA V DARLLELRRDLIAQLDLFDRVADEDLRDAEEN G   G    XXXXXXXX                        TE SEPRAVKAMRALAMAVEGDEAVSVELELLADKLRVMGGGGSGG  GCCGPALWRRVR
Sbjct:  152 VPPEEVKLEEGVVQCLMVLFNKETGLSNLEGSSTLWPVIVRSALDSTSERVRSSLLKVLTVMTETGQDGLKVVLNALDVAKARKNQDLRFSLLPGIIVG-----------GNDGEED--------------------------------LRLALAVAVFLNTVLSRAFKFEERVLLRGEMVAGGVVAAIAGARERWGEXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGAGVFVSNAGGVCV-VPPKSPAAGSSMSSLASVTARSSFSSTGSPVPRTVAQLSAAVTDARLLELRRDLIAQLDLFDRVADEDLRDAEENGGTAAGKGAGXXXXXXXXDGVGSAGRGRNQAAGGAA------TEISEPRAVKAMRALAMAVEGDEAVSVELELLADKLRVMGGGGSGGVTGCCGPALWRRVR 575          
BLAST of mRNA_E-fasciculatus_F_contig12582.1974.1 vs. uniprot
Match: D7FPH1_ECTSI (Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH1_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 5.570e-27
Identity = 76/197 (38.58%), Postives = 105/197 (53.30%), Query Frame = 0
Query:    1 VPPEEVELEEGVVQCLMVLFNKETGLSNLEGGSNLWPVIVRSALDSTSERVRSSLLKVLTVMTETGDDGLKVVLNALDVVKAQKNRDLRFSFLVDALSKAAATTTTGDWQGRGGTQPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVFLNTVLSRAFEFEERVLLRGEMVAGGVVAAIAGARERWG 197
            VP EEV+LEE +V+C+M+L NK  GL  LE  S+L P++ RSA+DS S  VR +LLK+LT++TE+G  G + V NALD VK  K+ DLRF+ LV+A   A ++                                                      VF NT+LS AFEFEERV+LR EM++ G++ A+   R+ +G
Sbjct:  163 VPEEEVKLEEELVRCVMILLNKPQGLMTLEASSDLLPLLARSAIDSCSNYVRCNLLKLLTIVTESGPSGFETVTNALDHVKVDKDEDLRFALLVEAFGDADSSGVA---------------------------------------------LITDLVVFFNTILSSAFEFEERVMLRTEMISAGMLEAMQRVRDYFG 314          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12582.1974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCH4_ECTSI8.500e-13467.23FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JDW8_9PHAE3.470e-11770.17FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FPH1_ECTSI5.570e-2738.58Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12582contigE-fasciculatus_F_contig12582:601..3546 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12582.1974.1mRNA_E-fasciculatus_F_contig12582.1974.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12582 601..3546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12582.1974.1 ID=prot_E-fasciculatus_F_contig12582.1974.1|Name=mRNA_E-fasciculatus_F_contig12582.1974.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=477bp
VPPEEVELEEGVVQCLMVLFNKETGLSNLEGGSNLWPVIVRSALDSTSER
VRSSLLKVLTVMTETGDDGLKVVLNALDVVKAQKNRDLRFSFLVDALSKA
AATTTTGDWQGRGGTQPGSGSGGEEEGDGEGSTQPGSGSGGGGNEEDGQL
RLALAVAVFLNTVLSRAFEFEERVLLRGEMVAGGVVAAIAGARERWGEDD
DDDDDYSDCGSSVCGAEDGVRDHHHRPDATALFFENDSSDEDSSGGVAGG
LRGDFGGNGGGGVSKKRVFVPNSGSGNNPAAAAAAAGVFVSNTGAAPVFL
PLKSPAAGGSTSSLATVTARSSFSSTGSSVPRTLAQLSADVADARLLELR
RDLIAQLDLFDRVADEDLRDAEENAGDGDGTAAAEGDNDDDYDSEQDGGG
SAERRRRSRAAGGAAATESSEPRAVKAMRALAMAVEGDEAVSVELELLAD
KLRVMGGGGSGGGVGCCGPALWRRVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold