mRNA_E-fasciculatus_F_contig1258.1972.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE) HSP 1 Score: 410 bits (1053), Expect = 8.330e-131 Identity = 198/299 (66.22%), Postives = 240/299 (80.27%), Query Frame = 3
Query: 702 VCGDPHMVGLLGQKIAWYGEDNGWYCLLDDSAFQINARVTAPLPEEFPNRQLLSGVSLLTADGHSLVIEVKNPYSIATEGCPSHA--CLADGSLRILVDGHESESLQTPGEDIVLPG-DVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLASETMVSPAWCAKFVRGNGPAGMSEVQSNHAIFRIETPTVTIRVNIGINYQDSKTDGDGS-VLIPELEFWQTDLAFEGLQTHGEAGGMLGDTSNFVYDNDGVPITRGMGALHAPVKNYRVSGPLGIDFEQQH 1586
V GD HMVGLLGQ+I WYGED+GWYCLL +S FQ+NARVTAP+P+EFP RQL+SGVS+ +A+G SLV+EVKNP + TEGC S + CLA+G+LRILVDG ES +LQ+P E++VLPG D+VVSSANLP ECRPFGGDRIWAAQ AAM+ A RSLRGHTPF DW+L ++TM +P WCA F R +G+S VQSN AI R+ET VT+RV++G+NYQDS DG+ VL+PEL+FWQTD+AFE L+ GE GGMLGDT+ +V D+DG PIT GM AL PV+ RVSGPLG+DFEQ H
Sbjct: 7 VSGDSHMVGLLGQEIDWYGEDSGWYCLLVNSEFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASGRRSLRGHTPFADWVLEADTMAAPGWCALFAREQRLSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGELGGMLGDTARYVIDDDGKPITSGMEALRGPVETCRVSGPLGVDFEQMH 305
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: D7G434_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G434_ECTSI) HSP 1 Score: 295 bits (754), Expect = 2.680e-88 Identity = 201/501 (40.12%), Postives = 217/501 (43.31%), Query Frame = 3
Query: 93 MWSLLKMVTVAICAQVSAGQVLIQVKKGTIPSNAFKSRGFDSALQEITKAKGSAETEHAISHVENGQHSTAATDQGAIQTHRKLGI--CFLVVVIFFATTAIANAPGPNDRRMLQSDTEEMVIAVDITITDPVNGATVYPVEVSVAADGLGEANVPLTFSDQTNDEDTGLCDECTVSFVAGECLSGPCDTYDMETTNANMEVVSSVCGDPHMVGLLGQKIAWYGEDNGWYCLLDDSAFQINARVTAPLPEEFPNRQLLSGVSLLTADGHSLVIEVKNPYSIATEGCPSHACLADGSLRILVDGHESESLQTPGEDIVLPGDVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLASETMVSPAWCAKFVRGNGPAGMSEVQSNHAIFRIETPTVTIRVNIGINYQDSKTDGDGSVLIPELEFWQTDLAFEGLQTHGEAGGMLGDTSNFVYDNDGVPITRGMGALHAPVKNYRVSGPLGIDFEQQHK 1589
MW LKMVTVA+CAQVSA QVLIQVKKGTIPS+ FK GFDS LQE TKA GS E EHAIS VENGQHST ATD+G +QTHR+L + C LVVVIF AT A RR+LQ TEEMVIAVD+TITDPVNGA YPVE SVA DGLG A +PLT S Q ND+DTGLCDECT+SFVAG+CLSGPCDTYD +TTN NME+VSS TDLAFEGLQ HGEAGGMLGDTS F DN+GVPIT GMGALH PVKNYRVSGPLG+DFEQ K
Sbjct: 1 MWRPLKMVTVALCAQVSASQVLIQVKKGTIPSHNFKPGGFDSTLQENTKADGSTEPEHAISLVENGQHSTVATDRGGLQTHRQLDLVFCILVVVIFVATAPRAY------RRVLQDGTEEMVIAVDMTITDPVNGAITYPVEFSVAGDGLGTAEIPLTLSSQINDDDTGLCDECTLSFVAGDCLSGPCDTYDKDTTNDNMEIVSS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDLAFEGLQMHGEAGGMLGDTSKFALDNNGVPITSGMGALHGPVKNYRVSGPLGVDFEQLRK 261
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE) HSP 1 Score: 271 bits (693), Expect = 1.310e-77 Identity = 160/364 (43.96%), Postives = 220/364 (60.44%), Query Frame = 3
Query: 522 AADGLGEANVPLTFSDQTNDEDTGLCDECTVSFVAG-ECLSGPCDTYDMETT-NANMEVV---SSVCGDPHMVGLLGQKIAWYGEDNGWYCLLDDSAFQIN--ARVTAPLPEEFPNRQLLSGVSLLTADGHSLVIEVKNPYSIATEGCPSHA--CLADGSLRILVDGHESESLQTPGEDI-VLPGDVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLASET-MVSPAWCAKFVRGNGPAGMSEVQSNHAIFRIETPTVTIRVNIGINYQ-DSKTDGDGSVLIPELEFWQTDLAFEGLQTHGEA-GGMLGDTSNFVYDNDGVPITRGMGALHAPVKNYRVSGPLGIDF 1574
A+DGLG A L FS +T TG T AG +C G C + T A+ V +VCGDPHM GL GQ+I W G D GWY L+ D IN R+TAPLP+EFP+RQL++ +++L+ GHS+VIEV+NPY++ T GCP CLA+G LRI+VD + + L + V G + VSS+NLPVEC+ FGGDRIWA R D R L G +W+L + M +P WCAK++ N ++++QS+HAIF+I+TPTVT+R+N G+NYQ + + + DG VL P+LEFWQ + +GL A G+LG+T+ VYD +G + G A +++YRVS L + F
Sbjct: 56 ASDGLGGA---LCFSRET--APTG-----TACEAAGCDCFIGVCFEPGLSATCEASFSVCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSK-GHSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWA--RMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAEND---LADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVL-PDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHF 402
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI) HSP 1 Score: 266 bits (679), Expect = 5.710e-77 Identity = 144/297 (48.48%), Postives = 197/297 (66.33%), Query Frame = 3
Query: 708 GDPHMVGLLGQKIAWYGEDNGWYCLL-DDSA-FQINARVTAPLPEEFPNRQLLSGVSLLTADGHSLVIEVKNPYSIATEGCPSHA--CLADGSLRILVDGHE-SESLQTPGEDIVLPGDVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLA-SETMVSPAWCAKFVRGNGPAGMSEVQSNHAIFRIETPTVTIRVNIGINYQ-DSKTDGDGSVLIPELEFWQTDLAFEGLQTHGEA-GGMLGDTSNFVYDNDGVPITRGMGALHAPVKNYRVSGPLGIDF 1574
GDPHM GL GQ+I W G D GWY L+ DD A IN RVTAPLP+EFP+RQL++ +++++ +G+S+VIEV+NPY+I T GCP CLA+G LRI+VDG E E L+ + V G + +S++NLPVECR FGG RIWA R D D R LRG +W+L + M + WCAK++ N ++++Q+NHAIF+I+TPTVT+R+N G+NYQ D + + DG VL P+LEFWQ D+ +GL A G+LG+T+ VY +G + G A V++YRVS LG+ F
Sbjct: 14 GDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMS-EGYSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWA--RMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAEND---LADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVL-PDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHF 303
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE) HSP 1 Score: 255 bits (651), Expect = 8.230e-69 Identity = 137/306 (44.77%), Postives = 193/306 (63.07%), Query Frame = 3
Query: 696 SSVCGDPHMVGLLGQKIAWYGEDNGWYCLLDDSAF--QINARVTAPLPEEFPNRQLLSGVSLLTADGHSLVIEVKNPYSI-ATEGCPSHA---CLADGSLRILVDGHESESLQTPGEDIVLPGDVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLASETMVSPAWCAKFVRGNGPAGMSEVQSNHAIFRIETPTVTIRVNIGINYQDS-KTDGDGSVLIPELEFWQTDLAFEGLQTHGEA-GGMLGDTSNFVYDNDGVPITRGMGALHAPVKNYRVSGPLGIDFEQQHK 1589
S +C DPHM GLLGQ I W+G D WY + D ++N R+TAPLP++FP+RQL++G+S+++ +GHSLV+EV NPYS +GCP + CLA+G L + VDG ++ L P +LPG + VS+ NLPV+C FGG +IWA A+ + R LR + F DW+L+ M + WC +++ G G VQS+HAI++I TP V +R+N+GI +QD + D DG VL P+L+ WQ D+ GL EA G+LG+T+ VYD DG + G A ++YRVSGPLG+DF H+
Sbjct: 399 SHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVIS-EGHSLVLEVTNPYSTDLNDGCPDGSPTPCLANGGLSVTVDGEKNVGLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWARHYEAI---LARRKLRAQS-FEDWVLSFTDMAAHDWCTEYISEKGLTG---VQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVL-PDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLHQ 695
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE) HSP 1 Score: 235 bits (599), Expect = 4.300e-66 Identity = 137/317 (43.22%), Postives = 192/317 (60.57%), Query Frame = 3
Query: 645 PCDTYDMETTNANMEVVSSVCGDPHMVGLLGQKIAWYGEDNGWYCLL-DDSA-FQINARVTAPLPEEFPNRQLLSGVSLLTADGHSLVIEVKNPYSIATEGCPSHA--CLADGSLRILVDGHESESLQTPGEDIVLPGDVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLA-SETMVSPAWCAKFVRGNGPAGMSEVQSNHAIFRIETPTVTIRVNIGINYQDS-KTDGDGSVLIPELEFWQTDLAFEGLQTHGEA-GGMLGDTSNFVYDNDGVPITRGMGALHAPVKNYRVSGPLGIDF 1574
P TY + NA+ + GDPHM GLLGQ++ W G D GWY L+ DD+A IN RVTAPLP+EFP+RQL++ +++++ +G+S+VIEVKNPY+ T GCP C A+G LRI+VDGHE + L + S +P GG RIWA R D R LRG +W+L + M + WCAK++ N ++++Q+NHAIF+I+TPTVT+R+N G+NYQ + + + DG VL P+LEFWQ D+ +GL A G+ G+T+ VYD +G + G A V++YRVS LG+ F
Sbjct: 3 PRPTYVDDDDNAD-----HIWGDPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMS-EGYSVVIEVKNPYTTDTGGCPEDVSPCHANGGLRIIVDGHEVDEL-------------LRFSRQMP------GGKRIWA--RMYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAEND---LADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVL-PDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHF 288
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE) HSP 1 Score: 211 bits (536), Expect = 7.590e-57 Identity = 129/319 (40.44%), Postives = 185/319 (57.99%), Query Frame = 3
Query: 654 TYDMETTNANMEVVSSVCGDPHMVGLLGQKIAWYGEDNGWYCLLDDSAFQ--INARVTAPLPEEFPNRQLLSGVSLLTADGHSLVIEVKNPYSIATEG-CPSHA---CLADGSLRILVDGHESESLQTPG----EDIVLPGDVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLASETMVSPAWCAKFVRGNGPAGMSEVQSNHAIFRIETPTVTIRVNIGINYQDS-KTDGDGSVLIPELEFWQTDLAFEGLQTHGEA-GGMLGDTSNFVYDNDGVPITRGMGALHAPVKNYRVSGPLGIDF 1574
+++ T A + C D + V LLGQ I W+G D GWY L+ D +N R+TAP PEEFP+RQL++G+S++ A GHSLVIEV PY T G CP A CLA+G L ++VDG E E+ +P D LPG + VS+ANLPV+C FGGD+I A A +T ++ R F +W+L+ + M + WC +++ +S+VQS AI++I TP V +R N+GI +Q + DG + +P+L+ W+ D+ GL E G+LG+T+ V D G + +G A ++YRVSG LG DF
Sbjct: 37 SHNSHTRTAGHNRKLTGCTDTYAV-LLGQSIDWFGIDGGWYSLVQDPDIDLNVNVRLTAPPPEEFPDRQLVTGLSVM-AGGHSLVIEVTKPYDTDTAGGCPDGAPAPCLANGGLSVIVDG-EKEADDSPLLHTIRDETLPGGIQVSAANLPVQCWQFGGDKISARHYA--NTIMEGRRHLLSETFEEWVLSFQHMAAHDWCTEYIAHKD---LSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRI-VPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDF 346
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE) HSP 1 Score: 195 bits (495), Expect = 5.750e-51 Identity = 125/327 (38.23%), Postives = 178/327 (54.43%), Query Frame = 3
Query: 630 ECLSGP--CDTYDMETTNANMEVVSS-VCGDPHMVGLLGQKIAWYGEDNGWYCLLDDSA-FQINARVTAPLPEEFPNRQLLSGVSLLTADG----HSLVIEVKNPYSIATEGCPSHA--CLADGSLRILVDGHESESLQTPGEDIVLPGDVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLASETMVSPAWCAKFV-RGNGPAG-MSEVQSNHAIFRIETPTVTIRVNIGINYQDSKTDGDGSVLIPELEFWQTDLAFEGLQTHGEAGGMLGDTSNFVYDNDGVPITRGMGALHAPVKNYRVSGPLGIDF 1574
+C +G CD D + E CGDPHM G LGQK + GED G+Y L+ D +N RVT+P+P P ++G+SLLT D HS+VIEVKNP+ I + CP+ CLADGSLR++++G E L PG + L V+V++ NLP ECR FG + W +R ++ A R L G DWLL T + C ++V + G AG + +QS HA F+I TPT T+R++ G +Q + D +P+ WQ ++ + + A G+LG+TS D G I GM A+ ++YRV+GPL + F
Sbjct: 60 QCKTGLKCCDETDPKVCKDPTETSGPRACGDPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVPS-LPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIES-ACPAGVSPCLADGSLRVMLNG--KEELSAPGS-VALADGVIVTAVNLPGECRSFGFEHYW--ERKKLENARHGRHL-GEQSMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAYGQDIMTGMEAIRGSEEDYRVAGPLDVTF 378
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI) HSP 1 Score: 193 bits (490), Expect = 9.690e-49 Identity = 106/273 (38.83%), Postives = 155/273 (56.78%), Query Frame = 3
Query: 711 DPHMVGLLGQKIAWYGEDNGWYCLLDD-SAFQINARVTAPLPEEFPNRQLLSGVSLLTADGHSLVIEVKNPYSIA------TEGCPSHACLADGSLRILVDGHESESLQTPGEDIVLPGDVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLASETMVSPAWCAKFVRG-NGPA-GMSEVQSNHAIFRIETPTVTIRVNIGINYQDSKTDGDGSVLIPELEFWQTDLAFEGLQTHGEAGGMLGDTSNFVYDNDGVPI 1502
DPH+ GL GQ WYG+D GWY L Q+N RVT+ LP FP RQL++GV+L+T GH++ ++ +P +A + S CL +G LRI VDG E LQ GE GD+ +++ NLP+EC+ FG +W RSLR DWL+A M++PAWC K+++ NG ++ ++S+HA+ RI TP +++RVN+GIN + +T DG V +P FWQ D+ E + A GML +T +V +G+ +
Sbjct: 245 DPHLTGLRGQHFDWYGQDGGWYAFLSTPDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGSAPCLVNGGLRITVDGREQ--LQGAGE-YDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETVFDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQDGRV-VPTASFWQMDVRVEHAEGMATAKGML-ETYGYVCSLNGLSL 512
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.210e-38 Identity = 110/317 (34.70%), Postives = 161/317 (50.79%), Query Frame = 3
Query: 684 MEVVSSVCGDPHMVGLLGQKIAWYGEDNGWYCLLDDSAFQINARVTAPLPE--EFPNRQLLSG---------VSLLTADG----HSLVIEVKNPYSIATEGCPSHA--CLADGSLRILVDGHESESLQTPGEDIVLPGDVVVSSANLPVECRPFGGDRIWAAQRAAMDTAIDHRSLRGHTPFVDWLLASETMVSPAWCAKFV-RGNGP-AGMSEVQSNHAIFRIETPTVTIRVNIGINYQDSKTDGDGSVLIPELEFWQTDLAFEGLQTHGEAGGMLGDTSNFVYDNDGVPITRGMGALHAPVKNYRVSGPLGIDFE 1577
M V S+ G PHM G LGQK + GED GWY ++ DS +N RVT+P P Q L +S+LT D HS+VIEV P+S+ + CP+ CLADG+LR+L+DG E+L G + L V +S+ NLP CR FG ++ W ++ ++ A R LR +W+L T + C ++V R GM QS HA F+I TP T+R++ G +Q + D +P+ WQ +LA + Q A G+LG+T D G PI GM A+ ++ + G + ++ +
Sbjct: 1 MPPVFSLSGGPHMTGFLGQKFDFTGEDGGWYSIIADSNMNVNMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSS-CPAGVSPCLADGALRVLLDG--DEALFAHGT-VSLGLGVEISAVNLPGACRSFGFEKYWEHKK--LEYATGGRQLRTQPSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGILGETFVPTRDASGKPIMTGMEAIRGTEEDCKCGGNVMMNVQ 311 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1258.1972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1258.1972.1 >prot_E-fasciculatus_F_contig1258.1972.1 ID=prot_E-fasciculatus_F_contig1258.1972.1|Name=mRNA_E-fasciculatus_F_contig1258.1972.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=502bp MWSLLKMVTVAICAQVSAGQVLIQVKKGTIPSNAFKSRGFDSALQEITKAback to top mRNA from alignment at E-fasciculatus_F_contig1258:4095..17076- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1258.1972.1 ID=mRNA_E-fasciculatus_F_contig1258.1972.1|Name=mRNA_E-fasciculatus_F_contig1258.1972.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=12982bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1258:4095..17076- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1258:4095..17076- >mRNA_E-fasciculatus_F_contig1258.1972.1 ID=mRNA_E-fasciculatus_F_contig1258.1972.1|Name=mRNA_E-fasciculatus_F_contig1258.1972.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3012bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1258:4095..17076- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |