mRNA_E-fasciculatus_F_contig12578.1970.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: D7G6M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M4_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 3.240e-141 Identity = 216/237 (91.14%), Postives = 218/237 (91.98%), Query Frame = 1
Query: 1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLDCDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASSLLETICSQ 711
+AYSVADPRVKELAYVLKRWAKRR VNNASEGTLSSYGYLLCLLHFLQTR+PPVVPNLQA LPPDWAGEPLHGVPRLPVVMTKQPT GLDCDTYFYDPLT GRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELD RTSVVSVRLG LADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASSLLETICSQ
Sbjct: 422 KAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQA--------------LPPDWAGEPLHGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASSLLETICSQ 644
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: K8YXG6_NANGC (Nucleotidyltransferase-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YXG6_NANGC) HSP 1 Score: 197 bits (502), Expect = 1.260e-57 Identity = 113/260 (43.46%), Postives = 148/260 (56.92%), Query Frame = 1
Query: 7 YSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSP------------PVVPNLQARRCLPRGRFFEGLALPPDWAG------EPLHGVPRLPVVMTKQPTGGLDCDTYFYDPLTAGRDGERRAA--VLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYAL-----LAGXXXXXDASSLLETICSQ 711
YS DPRV+ LAY++K WA+ R +NNAS GTLSSY Y+L +LHFLQT + P+VPNLQ LPPDW G E + G +LP + P G+D DTYFY + G+ +LRE+ +RN AS GELL FF Y++ E D+R V+SVRLG +ERKAE W++++RL++EDPFET Y+V H LK + +H+R EFARAYAL + A LL IC +
Sbjct: 137 YSQVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQL--------------LPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEPPSEEQGQPNGQRNLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMGEGATEAGAEGLLARICEE 382
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: K3W949_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W949_GLOUD) HSP 1 Score: 203 bits (517), Expect = 1.660e-56 Identity = 119/237 (50.21%), Postives = 150/237 (63.29%), Query Frame = 1
Query: 1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQA--------RRC-LPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLDC----------DTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 654
+AY+ AD RV+ LAYV+KR+ K+R +N A+EGTLSSYGYLL L+HFLQ + PPV+P LQA RRC R + L P E H +LP V+ K P G + +TYF+DP A +D ++ VLREFG RN+AS+GELL GFF YF L+ D VVSVR+ R +E K W MHTRLS+EDPFE +YDVAHVLK SR K++R +FA AY+LL
Sbjct: 744 RAYANADERVRILAYVIKRFVKKRRMNCAAEGTLSSYGYLLMLIHFLQRQDPPVLPVLQALPPAWDGSRRCDCTPSRVWCSLQSPQCALSE-RHPEMQLPSVLCKGPAGDNEASSSNGNSGKVETYFFDPF-AFQDPPQKLQVLREFGKRNSASAGELLIGFFEYFGLQFDASRQVVSVRMARNLSKEEKKRESQWRMHTRLSIEDPFEIAYDVAHVLKGSRDKYIRQQFAWAYSLL 978
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: W7TXG0_9STRA (PAP/25A-associated n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXG0_9STRA) HSP 1 Score: 198 bits (503), Expect = 7.480e-55 Identity = 113/260 (43.46%), Postives = 149/260 (57.31%), Query Frame = 1
Query: 7 YSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSP------------PVVPNLQARRCLPRGRFFEGLALPPDWAG------EPLHGVPRLPVVMTKQPTGGLDCDTYFYDPLTAGRDGERRA--AVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYAL-----LAGXXXXXDASSLLETICSQ 711
YS DPRV+ LAY++K WA+ R +NNAS GTLSSY Y+L +LHFLQT + P+VPNLQ LPPDW G E + G +LP + P G+D DTYFY + G+ ++LRE+ +RN AS GELL FF Y++ E D+R V+SVRLG +ERKAE W++++RL++EDPFET Y+V H LK + +H+R EFARAYAL + A LL IC +
Sbjct: 604 YSRVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQL--------------LPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEPPSEEQGQPNGQRSLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMGEGATEAGAEGLLARICEE 849
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: A0A662XQ60_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQ60_9STRA) HSP 1 Score: 199 bits (505), Expect = 7.590e-55 Identity = 116/231 (50.22%), Postives = 147/231 (63.64%), Query Frame = 1
Query: 1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD-----------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSV-RLG-RLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 654
+AY+ ADPRV+ LAYVLKR+ K+R +N A+EGTLSSYGYLL L+HFLQ ++PPV+P LQA LPP+W E +LP V+ + P+ L+ +TYFYDP A R+ + A+LR FG+RNT S+GELL GF +YF L D VVSV R G R+ ++ K A W TRLS+EDPFE SYDVAHVLK SR K++R +F RAY LL
Sbjct: 822 RAYASADPRVRVLAYVLKRFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQNPPVLPVLQA--------------LPPNWPEEQDAPGQKLPSVLCRGPSDELEPASGDGEGSGGMETYFYDPF-AFREPSEKLALLRAFGARNTQSTGELLLGFLQYFGLRFDATRDVVSVSRQGARVVTKDEKRHANQWRFTTRLSIEDPFERSYDVAHVLKGSRDKYIRQQFVRAYVLL 1037
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: A0A6A3SY79_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SY79_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.440e-54 Identity = 112/229 (48.91%), Postives = 142/229 (62.01%), Query Frame = 1
Query: 1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD---------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRL--GRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 654
++Y+ ADPRV+ LAYV+KR+ K+R +N A+EGTLSSYGYLL L+HFLQ ++PPV+P LQA LPP+W EP +LP V+ + P+ LD +TYFYDP A R+ + A L EFG+RNT S GELL GF RY+ L+ D VVSVR ++ K W TRLS+EDPFE YDVAHVLK SR K++R +F RAY LL
Sbjct: 821 RSYASADPRVRMLAYVIKRFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQNPPVLPVLQA--------------LPPNWPDEPKE---KLPSVLCRGPSDELDPNAADGHSGIETYFYDPF-AFREPNEKLAALNEFGARNTQSVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDEKRHTSQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLL 1031
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: D0NHG9_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NHG9_PHYIT) HSP 1 Score: 197 bits (502), Expect = 1.600e-54 Identity = 114/238 (47.90%), Postives = 147/238 (61.76%), Query Frame = 1
Query: 1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD-------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRL--GRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASS 687
+AY+ ADPRV+ LAYVLK++ K+R +N A+EGTLSSYGYLL L+HFLQ + PPV+P LQA LPP+W P LP V+++ P+ LD DTYFYDP A ++ + + AVLRE+ SRNT + GELL GF RY+ L+ D VVSVR ++ K C W TRLS+EDPFE YDVAHVLK SR K++R +F RAY LL ++S+
Sbjct: 741 RAYASADPRVRMLAYVLKQFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVLPVLQA--------------LPPNWPELPSE---PLPTVLSRGPSEELDPSDGKSGIDTYFYDPF-AFQEPKEKLAVLREYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDDKRHTCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLMDGAIQHESST 960
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: A0A833W152_PHYIN (Cid1 family poly A polymerase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W152_PHYIN) HSP 1 Score: 197 bits (502), Expect = 1.680e-54 Identity = 114/238 (47.90%), Postives = 147/238 (61.76%), Query Frame = 1
Query: 1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD-------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRL--GRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASS 687
+AY+ ADPRV+ LAYVLK++ K+R +N A+EGTLSSYGYLL L+HFLQ + PPV+P LQA LPP+W P LP V+++ P+ LD DTYFYDP A ++ + + AVLRE+ SRNT + GELL GF RY+ L+ D VVSVR ++ K C W TRLS+EDPFE YDVAHVLK SR K++R +F RAY LL ++S+
Sbjct: 757 RAYASADPRVRMLAYVLKQFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVLPVLQA--------------LPPNWPELPSE---PLPTVLSRGPSEELDPSDGKSGIDTYFYDPF-AFQEPKEKLAVLREYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDDKRHTCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLMDGAIQHESST 976
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: A0A835YMU6_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU6_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.690e-54 Identity = 132/293 (45.05%), Postives = 154/293 (52.56%), Query Frame = 1
Query: 1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPR----LPVVMTKQPTGGLDCDTYFYDPLTAGRDGERRAAVLR---------EFGSRNTASSGEL--------------------LAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWS-----------------RFKHVRMEFARAYALLAGXXXXX--------DASSLLETIC 705
+ Y++ADPRV+ LA+V+K WAK+R +N SEGTLSSYGYLL LLH+LQTR+PPVVPNLQA LPPDW G P R LP T + G C+TYF+ P G D RR A L +FG N S E+ LAGFFRY+A ELD RT VVS+R G + KAEA W HTRLS+EDPFET YDVAHVLKWS R K + EFARAY LL DAS LL+T+C
Sbjct: 1539 RTYALADPRVRPLAFVVKHWAKQRQINCPSEGTLSSYGYLLLLLHYLQTRNPPVVPNLQA--------------LPPDWPGPPAAAPTRPGRGLPERSTAHASDGRLCNTYFFVP-PQGSDCLRRFAALNTESYAQSYAQFG--NELSLKEVFVEPSMXXXXXXXXXXXXXXLAGFFRYYAWELDMRTRVVSLRSGGTLPKAGKAEADAWGTHTRLSIEDPFETWYDVAHVLKWSSNLXXXXXXXXXXXXXXRHKLLHTEFARAYTLLCEAAQRTTNPGGGGGDASDLLQTLC 1814
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: G5A5T8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A5T8_PHYSP) HSP 1 Score: 197 bits (502), Expect = 2.230e-54 Identity = 112/229 (48.91%), Postives = 142/229 (62.01%), Query Frame = 1
Query: 1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD---------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRL--GRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 654
+AY+ ADPRV+ LAYV+KR+ K+R +N A+EGTLSSYGYLL L+HFLQ +SPPV+P LQA LPP+W EP +LP V+ + P+ LD +TYF+DP A R+ + A L +FG+RNT S GELL GF RY+ L+ D VVSVR ++ K W TRLS+EDPFE YDVAHVLK SR K++R +F RAY LL
Sbjct: 1111 RAYASADPRVRMLAYVIKRFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQSPPVLPVLQA--------------LPPNWPDEPRE---KLPSVLCRGPSDELDPNATDGHSGIETYFFDPF-AFREPNEKLAALNDFGARNTQSVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDEKRHTSQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLL 1321 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12578.1970.1 >prot_E-fasciculatus_F_contig12578.1970.1 ID=prot_E-fasciculatus_F_contig12578.1970.1|Name=mRNA_E-fasciculatus_F_contig12578.1970.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=237bp QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRback to top mRNA from alignment at E-fasciculatus_F_contig12578:630..3551- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12578.1970.1 ID=mRNA_E-fasciculatus_F_contig12578.1970.1|Name=mRNA_E-fasciculatus_F_contig12578.1970.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2922bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12578:630..3551- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12578:630..3551- >mRNA_E-fasciculatus_F_contig12578.1970.1 ID=mRNA_E-fasciculatus_F_contig12578.1970.1|Name=mRNA_E-fasciculatus_F_contig12578.1970.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1422bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12578:630..3551- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |