mRNA_E-fasciculatus_F_contig12578.1970.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12578.1970.1
Unique NamemRNA_E-fasciculatus_F_contig12578.1970.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: D7G6M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M4_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 3.240e-141
Identity = 216/237 (91.14%), Postives = 218/237 (91.98%), Query Frame = 1
Query:    1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLDCDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASSLLETICSQ 711
            +AYSVADPRVKELAYVLKRWAKRR VNNASEGTLSSYGYLLCLLHFLQTR+PPVVPNLQA              LPPDWAGEPLHGVPRLPVVMTKQPT GLDCDTYFYDPLT GRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELD RTSVVSVRLG LADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASSLLETICSQ
Sbjct:  422 KAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQA--------------LPPDWAGEPLHGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASSLLETICSQ 644          
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: K8YXG6_NANGC (Nucleotidyltransferase-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YXG6_NANGC)

HSP 1 Score: 197 bits (502), Expect = 1.260e-57
Identity = 113/260 (43.46%), Postives = 148/260 (56.92%), Query Frame = 1
Query:    7 YSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSP------------PVVPNLQARRCLPRGRFFEGLALPPDWAG------EPLHGVPRLPVVMTKQPTGGLDCDTYFYDPLTAGRDGERRAA--VLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYAL-----LAGXXXXXDASSLLETICSQ 711
            YS  DPRV+ LAY++K WA+ R +NNAS GTLSSY Y+L +LHFLQT +             P+VPNLQ               LPPDW G      E + G  +LP  +   P  G+D DTYFY    +   G+      +LRE+ +RN AS GELL  FF Y++ E D+R  V+SVRLG    +ERKAE   W++++RL++EDPFET Y+V H LK  + +H+R EFARAYAL     +        A  LL  IC +
Sbjct:  137 YSQVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQL--------------LPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEPPSEEQGQPNGQRNLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMGEGATEAGAEGLLARICEE 382          
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: K3W949_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W949_GLOUD)

HSP 1 Score: 203 bits (517), Expect = 1.660e-56
Identity = 119/237 (50.21%), Postives = 150/237 (63.29%), Query Frame = 1
Query:    1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQA--------RRC-LPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLDC----------DTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 654
            +AY+ AD RV+ LAYV+KR+ K+R +N A+EGTLSSYGYLL L+HFLQ + PPV+P LQA        RRC     R +  L  P     E  H   +LP V+ K P G  +           +TYF+DP  A +D  ++  VLREFG RN+AS+GELL GFF YF L+ D    VVSVR+ R   +E K     W MHTRLS+EDPFE +YDVAHVLK SR K++R +FA AY+LL
Sbjct:  744 RAYANADERVRILAYVIKRFVKKRRMNCAAEGTLSSYGYLLMLIHFLQRQDPPVLPVLQALPPAWDGSRRCDCTPSRVWCSLQSPQCALSE-RHPEMQLPSVLCKGPAGDNEASSSNGNSGKVETYFFDPF-AFQDPPQKLQVLREFGKRNSASAGELLIGFFEYFGLQFDASRQVVSVRMARNLSKEEKKRESQWRMHTRLSIEDPFEIAYDVAHVLKGSRDKYIRQQFAWAYSLL 978          
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: W7TXG0_9STRA (PAP/25A-associated n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXG0_9STRA)

HSP 1 Score: 198 bits (503), Expect = 7.480e-55
Identity = 113/260 (43.46%), Postives = 149/260 (57.31%), Query Frame = 1
Query:    7 YSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSP------------PVVPNLQARRCLPRGRFFEGLALPPDWAG------EPLHGVPRLPVVMTKQPTGGLDCDTYFYDPLTAGRDGERRA--AVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYAL-----LAGXXXXXDASSLLETICSQ 711
            YS  DPRV+ LAY++K WA+ R +NNAS GTLSSY Y+L +LHFLQT +             P+VPNLQ               LPPDW G      E + G  +LP  +   P  G+D DTYFY    +   G+     ++LRE+ +RN AS GELL  FF Y++ E D+R  V+SVRLG    +ERKAE   W++++RL++EDPFET Y+V H LK  + +H+R EFARAYAL     +        A  LL  IC +
Sbjct:  604 YSRVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQL--------------LPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEPPSEEQGQPNGQRSLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMGEGATEAGAEGLLARICEE 849          
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: A0A662XQ60_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQ60_9STRA)

HSP 1 Score: 199 bits (505), Expect = 7.590e-55
Identity = 116/231 (50.22%), Postives = 147/231 (63.64%), Query Frame = 1
Query:    1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD-----------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSV-RLG-RLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 654
            +AY+ ADPRV+ LAYVLKR+ K+R +N A+EGTLSSYGYLL L+HFLQ ++PPV+P LQA              LPP+W  E      +LP V+ + P+  L+            +TYFYDP  A R+   + A+LR FG+RNT S+GELL GF +YF L  D    VVSV R G R+  ++ K  A  W   TRLS+EDPFE SYDVAHVLK SR K++R +F RAY LL
Sbjct:  822 RAYASADPRVRVLAYVLKRFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQNPPVLPVLQA--------------LPPNWPEEQDAPGQKLPSVLCRGPSDELEPASGDGEGSGGMETYFYDPF-AFREPSEKLALLRAFGARNTQSTGELLLGFLQYFGLRFDATRDVVSVSRQGARVVTKDEKRHANQWRFTTRLSIEDPFERSYDVAHVLKGSRDKYIRQQFVRAYVLL 1037          
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: A0A6A3SY79_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SY79_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.440e-54
Identity = 112/229 (48.91%), Postives = 142/229 (62.01%), Query Frame = 1
Query:    1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD---------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRL--GRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 654
            ++Y+ ADPRV+ LAYV+KR+ K+R +N A+EGTLSSYGYLL L+HFLQ ++PPV+P LQA              LPP+W  EP     +LP V+ + P+  LD          +TYFYDP  A R+   + A L EFG+RNT S GELL GF RY+ L+ D    VVSVR        ++ K     W   TRLS+EDPFE  YDVAHVLK SR K++R +F RAY LL
Sbjct:  821 RSYASADPRVRMLAYVIKRFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQNPPVLPVLQA--------------LPPNWPDEPKE---KLPSVLCRGPSDELDPNAADGHSGIETYFYDPF-AFREPNEKLAALNEFGARNTQSVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDEKRHTSQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLL 1031          
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: D0NHG9_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NHG9_PHYIT)

HSP 1 Score: 197 bits (502), Expect = 1.600e-54
Identity = 114/238 (47.90%), Postives = 147/238 (61.76%), Query Frame = 1
Query:    1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD-------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRL--GRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASS 687
            +AY+ ADPRV+ LAYVLK++ K+R +N A+EGTLSSYGYLL L+HFLQ + PPV+P LQA              LPP+W   P      LP V+++ P+  LD        DTYFYDP  A ++ + + AVLRE+ SRNT + GELL GF RY+ L+ D    VVSVR        ++ K   C W   TRLS+EDPFE  YDVAHVLK SR K++R +F RAY LL       ++S+
Sbjct:  741 RAYASADPRVRMLAYVLKQFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVLPVLQA--------------LPPNWPELPSE---PLPTVLSRGPSEELDPSDGKSGIDTYFYDPF-AFQEPKEKLAVLREYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDDKRHTCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLMDGAIQHESST 960          
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: A0A833W152_PHYIN (Cid1 family poly A polymerase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W152_PHYIN)

HSP 1 Score: 197 bits (502), Expect = 1.680e-54
Identity = 114/238 (47.90%), Postives = 147/238 (61.76%), Query Frame = 1
Query:    1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD-------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRL--GRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASS 687
            +AY+ ADPRV+ LAYVLK++ K+R +N A+EGTLSSYGYLL L+HFLQ + PPV+P LQA              LPP+W   P      LP V+++ P+  LD        DTYFYDP  A ++ + + AVLRE+ SRNT + GELL GF RY+ L+ D    VVSVR        ++ K   C W   TRLS+EDPFE  YDVAHVLK SR K++R +F RAY LL       ++S+
Sbjct:  757 RAYASADPRVRMLAYVLKQFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVLPVLQA--------------LPPNWPELPSE---PLPTVLSRGPSEELDPSDGKSGIDTYFYDPF-AFQEPKEKLAVLREYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDDKRHTCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLMDGAIQHESST 976          
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: A0A835YMU6_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU6_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.690e-54
Identity = 132/293 (45.05%), Postives = 154/293 (52.56%), Query Frame = 1
Query:    1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPR----LPVVMTKQPTGGLDCDTYFYDPLTAGRDGERRAAVLR---------EFGSRNTASSGEL--------------------LAGFFRYFALELDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWS-----------------RFKHVRMEFARAYALLAGXXXXX--------DASSLLETIC 705
            + Y++ADPRV+ LA+V+K WAK+R +N  SEGTLSSYGYLL LLH+LQTR+PPVVPNLQA              LPPDW G P     R    LP   T   + G  C+TYF+ P   G D  RR A L          +FG  N  S  E+                    LAGFFRY+A ELD RT VVS+R G    +  KAEA  W  HTRLS+EDPFET YDVAHVLKWS                 R K +  EFARAY LL               DAS LL+T+C
Sbjct: 1539 RTYALADPRVRPLAFVVKHWAKQRQINCPSEGTLSSYGYLLLLLHYLQTRNPPVVPNLQA--------------LPPDWPGPPAAAPTRPGRGLPERSTAHASDGRLCNTYFFVP-PQGSDCLRRFAALNTESYAQSYAQFG--NELSLKEVFVEPSMXXXXXXXXXXXXXXLAGFFRYYAWELDMRTRVVSLRSGGTLPKAGKAEADAWGTHTRLSIEDPFETWYDVAHVLKWSSNLXXXXXXXXXXXXXXRHKLLHTEFARAYTLLCEAAQRTTNPGGGGGDASDLLQTLC 1814          
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Match: G5A5T8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A5T8_PHYSP)

HSP 1 Score: 197 bits (502), Expect = 2.230e-54
Identity = 112/229 (48.91%), Postives = 142/229 (62.01%), Query Frame = 1
Query:    1 QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTRSPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTGGLD---------CDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDFRTSVVSVRL--GRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 654
            +AY+ ADPRV+ LAYV+KR+ K+R +N A+EGTLSSYGYLL L+HFLQ +SPPV+P LQA              LPP+W  EP     +LP V+ + P+  LD          +TYF+DP  A R+   + A L +FG+RNT S GELL GF RY+ L+ D    VVSVR        ++ K     W   TRLS+EDPFE  YDVAHVLK SR K++R +F RAY LL
Sbjct: 1111 RAYASADPRVRMLAYVIKRFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQSPPVLPVLQA--------------LPPNWPDEPRE---KLPSVLCRGPSDELDPNATDGHSGIETYFFDPF-AFREPNEKLAALNDFGARNTQSVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDEKRHTSQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLL 1321          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12578.1970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6M4_ECTSI3.240e-14191.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K8YXG6_NANGC1.260e-5743.46Nucleotidyltransferase-like protein n=1 Tax=Nannoc... [more]
K3W949_GLOUD1.660e-5650.21Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W7TXG0_9STRA7.480e-5543.46PAP/25A-associated n=1 Tax=Nannochloropsis gaditan... [more]
A0A662XQ60_9STRA7.590e-5550.22Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A6A3SY79_9STRA1.440e-5448.91Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
D0NHG9_PHYIT1.600e-5447.90Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A833W152_PHYIN1.680e-5447.90Cid1 family poly A polymerase n=1 Tax=Phytophthora... [more]
A0A835YMU6_9STRA1.690e-5445.05WW domain-containing protein n=1 Tax=Tribonema min... [more]
G5A5T8_PHYSP2.230e-5448.91Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12578contigE-fasciculatus_F_contig12578:630..3551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score422.2
Seed ortholog evalue1.6e-115
Seed eggNOG ortholog2880.D7G6M4
KEGG koko:K13291
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016073,GO:0016074,GO:0016180,GO:0016740,GO:0016772,GO:0016779,GO:0019219,GO:0019222,GO:0031123,GO:0031124,GO:0031126,GO:0031323,GO:0031325,GO:0034470,GO:0034641,GO:0034660,GO:0043144,GO:0043170,GO:0043628,GO:0043629,GO:0043631,GO:0044237,GO:0044238,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050265,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060147,GO:0060148,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0065007,GO:0070569,GO:0070920,GO:0071050,GO:0071076,GO:0071704,GO:0080090,GO:0090065,GO:0090304,GO:0097159,GO:0140098,GO:1900368,GO:1900370,GO:1901360,GO:1901363,GO:1903705
EggNOG free text desc.RNA uridylyltransferase activity
EggNOG OGsCOG5260@1,KOG2277@2759
EC2.7.7.52
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size711
Cds size711
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12578.1970.1prot_E-fasciculatus_F_contig12578.1970.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12578 630..3551 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927764.5483336-CDS-E-fasciculatus_F_contig12578:629..7651622927764.5483336-CDS-E-fasciculatus_F_contig12578:629..765Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 630..765 -
1695995684.4249566-CDS-E-fasciculatus_F_contig12578:629..7651695995684.4249566-CDS-E-fasciculatus_F_contig12578:629..765Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 630..765 -
1622927764.5595152-CDS-E-fasciculatus_F_contig12578:1502..16061622927764.5595152-CDS-E-fasciculatus_F_contig12578:1502..1606Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 1503..1606 -
1695995684.4471188-CDS-E-fasciculatus_F_contig12578:1502..16061695995684.4471188-CDS-E-fasciculatus_F_contig12578:1502..1606Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 1503..1606 -
1622927764.5691843-CDS-E-fasciculatus_F_contig12578:1911..20461622927764.5691843-CDS-E-fasciculatus_F_contig12578:1911..2046Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 1912..2046 -
1695995684.456402-CDS-E-fasciculatus_F_contig12578:1911..20461695995684.456402-CDS-E-fasciculatus_F_contig12578:1911..2046Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 1912..2046 -
1622927764.5804446-CDS-E-fasciculatus_F_contig12578:2625..27421622927764.5804446-CDS-E-fasciculatus_F_contig12578:2625..2742Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 2626..2742 -
1695995684.4658804-CDS-E-fasciculatus_F_contig12578:2625..27421695995684.4658804-CDS-E-fasciculatus_F_contig12578:2625..2742Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 2626..2742 -
1622927764.5917964-CDS-E-fasciculatus_F_contig12578:3332..35511622927764.5917964-CDS-E-fasciculatus_F_contig12578:3332..3551Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 3333..3551 -
1695995684.4812677-CDS-E-fasciculatus_F_contig12578:3332..35511695995684.4812677-CDS-E-fasciculatus_F_contig12578:3332..3551Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12578 3333..3551 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12578.1970.1

>prot_E-fasciculatus_F_contig12578.1970.1 ID=prot_E-fasciculatus_F_contig12578.1970.1|Name=mRNA_E-fasciculatus_F_contig12578.1970.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=237bp
QAYSVADPRVKELAYVLKRWAKRRCVNNASEGTLSSYGYLLCLLHFLQTR
SPPVVPNLQARRCLPRGRFFEGLALPPDWAGEPLHGVPRLPVVMTKQPTG
GLDCDTYFYDPLTAGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALE
LDFRTSVVSVRLGRLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLK
WSRFKHVRMEFARAYALLAGGGGGGDASSLLETICSQ
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mRNA from alignment at E-fasciculatus_F_contig12578:630..3551-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12578.1970.1 ID=mRNA_E-fasciculatus_F_contig12578.1970.1|Name=mRNA_E-fasciculatus_F_contig12578.1970.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2922bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12578:630..3551- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGCGTACTCCGTGGCGGACCCCCGCGTCAAGGAGCTGGCGTACGTGCT CAAGCGCTGGGCCAAGCGTCGGTGTGTCAACAACGCGAGCGAGGGAACCC TGTCGTCCTACGGCTACCTGCTGTGCCTCTTGCACTTCCTGCAGACACGG AGCCCCCCGGTCGTTCCCAACCTGCAGGCAAGGCGGTGTCTTCCTCGCGG ACGGTTTTTTGAGGGGTTGGTGTTGCAGGAGTTGGGGCAGCTGGGGAGGC GGGAGCAGCTATGCTACAATAGGTCGTTTCTGGAAGACTTTACTTGTTGT TTTCTGGCCCCCCTTGTGTCTTCTTTTACCGTGGCGACGAGTTGCTGTTT GTGCCGTTGCCCCTAGGAGGTGTTGTTCCGCTGTAAAAGGGCTTTGGTAG CCACCAGGTAAAATCGTAAAGTTATCCGTGTGGGGCATGTGTTTGTCACT GTCTTATGCGCCGAAGGTGCTGATTGGCAGTCACCGTTGACTGTCTGTCT GTTCACTGCCGAAAGCTTTGGTCCTGACGGTGGCATGCATGGTATACCGC TACTGCTGCTGTGGTCCGTCCGCATCGAAAGTTTCGGCGGGGACGACGGC GGTACTGGCGTGCCCCTCTGGCGTGACAGTACACACTGCATGTACCGCGC CGGTTTCGCCTGCCCACCCCCGCTAAAGGCTCCCCGTGGCCCCCCTCCTC GTCCTTTCCGCCCTGGGGTGACGTAAGCCCCCCGGCTCTCAACCGGGCCG GACTGGACTGCTGTTGCCGTACCTGACGCTGTTGTTGTTGTTGTTGTTGT TGTTTTCAGGCGCTGCCGCCGGACTGGGCTGGCGAACCGCTGCACGGGGT TCCCAGGTTGCCGGTGGTGATGACCAAGCAGCCCACGGGTGGCTTGGACT GCGACACTTACTTTTACGACCCGCTGGTGAGTGTTTGCCGGCGTGTATCG GGGGAGGGGGGAGGTAACTGCTATGTCGCCTGCTTCGTGTGTGTTAACTC GAGTAACGTCTGTGTTTTCTCTCTGAGTGCCCAAAGAGGTGAGCTTCCTG GCGTACGTTGATCGTGCGTGTGGCTACAGAGTTGTATTGGAGCTAGCTGG ATCGCGGACAAGACAAGGCCTTTGGCGGAGTCGTGTGCACGGCGTCGGTC GATCGGTCTCTGTTTTTTTGTCCCCAACCTTTTGTTGCTGTGGCGCTACG AGTTGGGTTATTCGTGTCGTGGAACTGCCCTGTGGTGTGTTGCGCGCCCT CGCCGCCGCCGCCACAGTCATCGTTGAATGTGCGTGCGGGCGCGTTCACC AGGGATCACTTCCTCTCCGCTCTCCTTCTCTTTTCTTCTCTGCTTTAGTT TTGTCCTCCCTTGCCTTCGTTGCAATTGCGCTTTTGCTTGCAACTCGTTC ATCTCCCCGCCGCCGCCTCTGTCACTGCTGTCTGTCTCCTTCCTCCTCCT CCTCCATGTGGTGACCTACGCTGCTTGCCATGTTGCTCAATGATGGAACG GATAGACGGCAGGCAGGGACGGAGAGCGCAGGGCCGCCGTGCTGCGAGAG TTCGGGTCCCGCAACACCGCCTCGTCGGGGGAACTCCTGGCGGGATTCTT CCGATACTTCGCGCTCGAGCTGGACTTCAGGACCAGCGTGGTGAGCTACA GTAGATGCGATCCACAACCAGGCGGTTGCATGGTGGTGGTGTGTTGCATG CATGCATGCATGTGTGCGTGTGACGACATACCGTGCGGTGTGAGCTCTTC GCTAGGTTATTTTTCTCTTCACGTGGTAGTTTTTTTACGAGCTTCGTGTT GATTTTTTTTGTTCTCGAGTCCCTTGTGGTACCCCTATTTTTCTTTGTTA CCTCATTCAGTTGCAAGCTTCCTCCCGTTCCCCCATCTCTCTCATCTTAT CTACCATCGCCCCTCTCCCCCCGCTGTTCCATGTATGCATGGTAGGTGAG TGTCCGTCTCGGGCGTCTGGCCGACCGCGAGAGGAAGGCGGAAGCTTGCT GCTGGAGCATGCATACCCGCCTCAGCCTGGAGGACCCTTTCGAGACCTCG TGAGTCAATAACCTGGCTAGGGTTGGTTGTTGCAAGCGTTGAGCCATAAT CGCAGTCAAGAGATTGTAGGTTCAGCGAATTGCAGCCTTTTTCAAATTGA GTAAGAGTTGAGGTTAAGGCCGGGGATGGACAAGGTTGAGGATGACGTAC GGATAGCCTTGCCTCTTCAAAAGCTTCTCGGAAGAGACCTGAGGGGGGAG AGCAGCGGCCTGGACTATTACAGAATTTTGTGTGGGGGTACTATATGATG AGTCCGGTTAGCCTCCGTCTTGGGAGGTGTCCTGGTTCGTGAGGGAGAGC GTGGGCAACGGTCCCTTCGAATCACCGTGAAAGCAGCATCGACACCACCA CCTGCAGGAGCAGCGGCGAACATGAGAAGATAGTGTTATTGGCACGAGGA ATTGGCGGTGTCATGGTCGTGCTATGGAACATTGGTGCAATAGCGCAAGG TTGTCTTCCGGAAATGAAGCGTTTTTTTGTCGAGTTGGGGACAAGGGTGT ATGTGTCCCTCAGCAGTACAGAGTTACTCTTTTTGGCAGCGTGTTGAGTA ACGCTCTGGTGCCCGCTTCACATCTGTCAGTACTCGCAGACATCTCAGGG CGGCTGCCCCACCTGTGTACATGCATAGCGTGCCCCCGCACCCAATGCGC ACATCCTAACCCTCCCCGCCGTCGCCCCGTCACCCGCGACCACCGCCCCC GCAAATCAACGGCTCTTACAACCCGCTCTCTAAAAGTTACGACGTCGCAC ACGTCCTCAAGTGGTCTCGCTTCAAGCACGTGCGCATGGAGTTCGCCAGG GCCTACGCTCTGCTCGCCGGAGGCGGAGGCGGGGGCGACGCCTCCTCCCT GCTGGAGACGATATGCAGCCAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12578:630..3551-

>mRNA_E-fasciculatus_F_contig12578.1970.1 ID=mRNA_E-fasciculatus_F_contig12578.1970.1|Name=mRNA_E-fasciculatus_F_contig12578.1970.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1422bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12578:630..3551- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGCGTACTCCGTGGCGGACCCCCGCGTCAAGGAGCTGGCGTACGTGCT
CAAGCGCTGGGCCAAGCGTCGGTGTGTCAACAACGCGAGCGAGGGAACCC
TGTCGTCCTACGGCTACCTGCTGTGCCTCTTGCACTTCCTGCAGACACGG
AGCCCCCCGGTCGTTCCCAACCTGCAGGCAAGGCGGTGTCTTCCTCGCGG
ACGGTTTTTTGAGGGGTTGCAGGCGTACTCCGTGGCGGACCCCCGCGTCA
AGGAGCTGGCGTACGTGCTCAAGCGCTGGGCCAAGCGTCGGTGTGTCAAC
AACGCGAGCGAGGGAACCCTGTCGTCCTACGGCTACCTGCTGTGCCTCTT
GCACTTCCTGCAGACACGGAGCCCCCCGGTCGTTCCCAACCTGCAGGCAA
GGCGGTGTCTTCCTCGCGGACGGTTTTTTGAGGGGTTGGCGCTGCCGCCG
GACTGGGCTGGCGAACCGCTGCACGGGGTTCCCAGGTTGCCGGTGGTGAT
GACCAAGCAGCCCACGGGTGGCTTGGACTGCGACACTTACTTTTACGACC
CGCTGGCGCTGCCGCCGGACTGGGCTGGCGAACCGCTGCACGGGGTTCCC
AGGTTGCCGGTGGTGATGACCAAGCAGCCCACGGGTGGCTTGGACTGCGA
CACTTACTTTTACGACCCGCTGACGGCAGGCAGGGACGGAGAGCGCAGGG
CCGCCGTGCTGCGAGAGTTCGGGTCCCGCAACACCGCCTCGTCGGGGGAA
CTCCTGGCGGGATTCTTCCGATACTTCGCGCTCGAGCTGGACTTCAGGAC
CAGCGTGACGGCAGGCAGGGACGGAGAGCGCAGGGCCGCCGTGCTGCGAG
AGTTCGGGTCCCGCAACACCGCCTCGTCGGGGGAACTCCTGGCGGGATTC
TTCCGATACTTCGCGCTCGAGCTGGACTTCAGGACCAGCGTGGTGAGTGT
CCGTCTCGGGCGTCTGGCCGACCGCGAGAGGAAGGCGGAAGCTTGCTGCT
GGAGCATGCATACCCGCCTCAGCCTGGAGGACCCTTTCGAGACCTCGTGA
GTGTCCGTCTCGGGCGTCTGGCCGACCGCGAGAGGAAGGCGGAAGCTTGC
TGCTGGAGCATGCATACCCGCCTCAGCCTGGAGGACCCTTTCGAGACCTC
TTACGACGTCGCACACGTCCTCAAGTGGTCTCGCTTCAAGCACGTGCGCA
TGGAGTTCGCCAGGGCCTACGCTCTGCTCGCCGGAGGCGGAGGCGGGGGC
GACGCCTCCTCCCTGCTGGAGACGATATGCAGCCAGTTACGACGTCGCAC
ACGTCCTCAAGTGGTCTCGCTTCAAGCACGTGCGCATGGAGTTCGCCAGG
GCCTACGCTCTGCTCGCCGGAGGCGGAGGCGGGGGCGACGCCTCCTCCCT
GCTGGAGACGATATGCAGCCAG
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