mRNA_E-fasciculatus_F_contig12566.1964.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: D7G1P4_ECTSI (Biopterin transport-related protein BT1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P4_ECTSI) HSP 1 Score: 371 bits (953), Expect = 1.020e-124 Identity = 182/203 (89.66%), Postives = 193/203 (95.07%), Query Frame = 1
Query: 1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
+R SL GS MGLLLYNK+EWGWGLSIQQLFFLNAIFPVLFMGPWV SLRETAVVTDGN+P++QRLR+QCTEVFRALEQKAVYGPMG+IFIYNL QVPNAAWRSFLV GLSF+NF+LG+L VIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDL FS+GDDCIADFVSSIQFLPVVQM
Sbjct: 215 VRFVGSLLGSTMGLLLYNKDEWGWGLSIQQLFFLNAIFPVLFMGPWVWSLRETAVVTDGNVPIEQRLRQQCTEVFRALEQKAVYGPMGLIFIYNLLQVPNAAWRSFLVIGLSFSNFELGVLGVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLVFSVGDDCIADFVSSIQFLPVVQM 417
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A835Z8G1_9STRA (Biopterin transport-related protein BT1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G1_9STRA) HSP 1 Score: 222 bits (565), Expect = 3.650e-67 Identity = 106/198 (53.54%), Postives = 145/198 (73.23%), Query Frame = 1
Query: 16 SLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
SL GS +G +YNKE WGWG++I ++F LN +FP+L + P++ +LRE+A V LR QC +F AL ++V+ PM ++F YNLFQVPNAAWRSFLV+GL F +F LG++ ++GSL +S GL+AYK+ F + WR +Y TT + FFS Q+LLI RVN+ FG+GDLAF++GDD +A+FVS+IQFLPV QM
Sbjct: 154 SLLGSVLGTCVYNKERWGWGMTIGEVFLLNGLFPLLVVAPFMWTLRESAYVPRPGDRAAA-LRAQCDAIFTALSLRSVFVPMAVVFTYNLFQVPNAAWRSFLVEGLKFESFDLGLIGIVGSLFSSCGLIAYKRCFMGTGWRTIYRVTTTLTCFFSVVQLLLIFRVNQRFGVGDLAFALGDDALAEFVSAIQFLPVCQM 350
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A6V1WMI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK) HSP 1 Score: 197 bits (502), Expect = 2.610e-57 Identity = 91/203 (44.83%), Postives = 146/203 (71.92%), Query Frame = 1
Query: 1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
+R S+ GSAMG +LYN++ WGWGL+ Q+F LNA P + + P + LR+ + + +P+ QC E++ A++++ ++ PM IF YN+ Q+PNAAW SFL+ GL+F++F +G++SV GS+++ LGL+ YKK+FF+++WR +Y+WTTLI FFS Q++LI ++N+ +GI +L F++GDD A+F+ +IQFLP+ M
Sbjct: 205 IRFVGSILGSAMGAVLYNRDTWGWGLTTPQMFALNAFVPFVVLYPAMAYLRDASDLKPIPVPI------QCREIWGAVQKRNIWQPMAFIFAYNVMQIPNAAWSSFLIDGLNFSDFSIGVISVTGSVVSWLGLVVYKKFFFNTNWRGIYLWTTLITMFFSVLQLVLIFQLNQKWGIPNLWFALGDDAAAEFILAIQFLPMCIM 401
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A7S2XY88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY88_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.250e-50 Identity = 90/204 (44.12%), Postives = 134/204 (65.69%), Query Frame = 1
Query: 1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMF-GIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
+R S+ G G LLYN WGWGL+ Q+ +N + P++ + P ++ L E ++P +QC +V+ +EQ+AV+ PM I++YNL QVPN AW SFL GL F + +G+LS G+LM+ G+LAYK++FF SSW+ +Y+W+T++V+FFS QI LI RVN+ + G+ D F++GD+ IA ++S IQFLPV M
Sbjct: 193 VRFGGSVAGCLGGTLLYNSTNWGWGLTFPQVCLVNGVLPLVVLLPLLIPLWERQGSQGKSVP------QQCKDVWGTIEQRAVWQPMAFIYLYNLLQVPNVAWGSFLQLGLGFQAYGIGMLSTAGALMSFFGILAYKRFFFKSSWQGIYIWSTILVAFFSLCQIALIFRVNETWLGLSDYWFALGDNVIAAYISGIQFLPVCAM 390
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A1Z5K9Z9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9Z9_FISSO) HSP 1 Score: 174 bits (442), Expect = 1.670e-47 Identity = 81/198 (40.91%), Postives = 137/198 (69.19%), Query Frame = 1
Query: 16 SLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
S G+ +G L+YNK++W W L I+ +FF+NA FP++F+ P+V L E + TD + + +QC E+F + +AV+ PM +++YN Q+ NAAW +FLV+GL F+ +Q+G++S++GS+M+ G++ Y+++FF S+WR +Y W T + S + Q++L+ VN+ +GI D+ FS+GDD + +FV ++QFLP+ M
Sbjct: 359 STVGATIGALVYNKDDWDWSLPIRLIFFINAAFPLIFLLPFVPYLLE--LETDC---LPKNFWDQCRELFHTAQLRAVWQPMTFVYVYNALQLTNAAWMNFLVEGLKFSAWQIGLVSIVGSIMSWFGIMTYERFFFASNWRIVYFWCTTLASAIALGQLILVFGVNRQWGIPDIWFSMGDDVLVEFVIAVQFLPMCIM 551
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A7S1FNC7_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNC7_9STRA) HSP 1 Score: 171 bits (432), Expect = 7.850e-46 Identity = 81/198 (40.91%), Postives = 132/198 (66.67%), Query Frame = 1
Query: 16 SLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
S+ G+ +G ++YNK++W + L I +FF+NA FP++F+ P V L E + V Q C ++F + KAV+ PM ++IYN Q+ NAAW +FLV+GL F+ + +GI+ ++GS+MA G++ Y+K+FF S+WR +Y+W T I + + QI+L+ +N+ FG+ D+AFS+GDD + +FV ++QFLP+ M
Sbjct: 443 SVIGATIGAVVYNKDDWKFYLPISLVFFINAAFPMIFLLPLVPFLMEIETQCEPRNFVTQ-----CKDLFHTAQLKAVWQPMTFVYIYNAMQLANAAWMNFLVEGLKFSAWMIGIVGIVGSIMAWFGIMTYEKYFFGSNWRIVYLWCTTIAAIIAIAQIILVFGLNRKFGLSDIAFSMGDDILIEFVIAVQFLPMCIM 635
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A7S1TWA3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWA3_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.310e-45 Identity = 83/203 (40.89%), Postives = 130/203 (64.04%), Query Frame = 1
Query: 1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
LR S+ G+ G L+YNK+ WGWGLS Q+ F+ +FP+LF+ P+ + E + G V EQC +++ + AV+ PM ++IYN+ Q+PN AW SFL L F + LGI++ G++M LG++A+KK+FF +SWR +Y+ +TL+ + FS Q++LI +N+ GI D F++GDD ++ +++ IQFLPV M
Sbjct: 284 LRFFGSVLGAGTGTLVYNKDAWGWGLSFAQVCFVLGVFPLLFVVPFAYMVWEKPLSEAGAKSVP----EQCRDIWNTVTLDAVWMPMTFVYIYNVMQIPNVAWSSFLQLDLGFPPWALGIMTTTGAIMTFLGIVAFKKFFFKTSWRYIYISSTLLCTTFSLLQLVLIFHLNRGLGISDYFFALGDDVMSAYINGIQFLPVCIM 482
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: W7TKM6_9STRA (Folate biopterin transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM6_9STRA) HSP 1 Score: 159 bits (401), Expect = 4.870e-42 Identity = 73/198 (36.87%), Postives = 127/198 (64.14%), Query Frame = 1
Query: 16 SLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
++ G+ +G +LYN++EW WGLSI ++ LN + V+ + P+ L + V + L+EQ ++++ ++++ +Y PM I +YN+ +PNAAW +FL+ GL FT + LGI+ ++ ++ + LG+ Y+ + SWR +Y+ +T + FFS Q+ LI R+N +GI DL F++GDD A+F++++QFLP V M
Sbjct: 281 NVVGATLGTILYNEKEWHWGLSISSIYLLNGLAAVVLVLPFTYHLSDPNQVLEAR-----SLKEQLGDIWKMVQRRTIYVPMSFIAVYNMLLIPNAAWSNFLILGLKFTPWMLGIMFIVATVFSWLGITFYRAFLMPYSWRWVYIISTSLTVFFSVLQLSLIFRLNARWGIPDLIFALGDDAAANFITALQFLPAVTM 473
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A7R9U5H3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5H3_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.570e-41 Identity = 75/203 (36.95%), Postives = 126/203 (62.07%), Query Frame = 1
Query: 1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
LR S+ G++ G + +N + WGWGL+ ++ + P+ + P + E + G V EQC +++ ++ KAV+ PM ++ YN+ Q+PN AW SFL GL F + LGI+S G++M LG++A+K++FFH+SWR +Y+ +T + + FS Q++LI +N+ +G+ D F++GDD +A +++ IQFLPV M
Sbjct: 281 LRFVGSVLGASSGTVFFNAKAWGWGLTFGEVCLILGALPLFSVVPLAFFVWEKPIHEKGCKSVV----EQCQDIWETVQLKAVWKPMAFVYTYNILQIPNVAWSSFLQIGLDFKPWALGIMSTAGAIMTLLGIMAFKRFFFHTSWRYIYISSTCLSAAFSLLQLVLIFHLNRAWGLSDYFFALGDDVMAAYINGIQFLPVCIM 479
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Match: A0A836CBB7_9STRA (Folate-biopterin transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB7_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.540e-40 Identity = 75/204 (36.76%), Postives = 123/204 (60.29%), Query Frame = 1
Query: 1 LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLRETAVVTDGNIPVKQRLREQCTEVFRALEQKAVYGPMGIIFIYNLFQVPNAAWRSFLVKGLSFTNFQLGILSVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVN-KMFGIGDLAFSIGDDCIADFVSSIQFLPVVQM 609
+R S+ G MG ++YN+ +WGWGLS +Q+ L P++ +G + +L E A + + +QC +++ + KAV+ PM ++++N FQVPN AW+SFL L F + LG+++ G++M LG++AYKK+FFH SWR +Y + + + F Q+ LI + N K + +L F++GDD I ++ +QFLPV M
Sbjct: 185 VRFMGSVLGCLMGAVVYNQVQWGWGLSFRQVCLLTGALPLMLLGTTLWTLYEMAATP-------KTVAQQCGDIWDTICLKAVWKPMAFVYVFNFFQVPNIAWQSFLQLSLHFEPYMLGLMATAGAVMTLLGIIAYKKFFFHVSWRHIYFTSVCVTTAFKLLQMCLIFKWNEKYLHMSNLYFALGDDVITQYIQGVQFLPVCIM 381 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12566.1964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12566.1964.1 >prot_E-fasciculatus_F_contig12566.1964.1 ID=prot_E-fasciculatus_F_contig12566.1964.1|Name=mRNA_E-fasciculatus_F_contig12566.1964.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=203bp LRLPPSLTGSAMGLLLYNKEEWGWGLSIQQLFFLNAIFPVLFMGPWVLSLback to top mRNA from alignment at E-fasciculatus_F_contig12566:455..3844- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12566.1964.1 ID=mRNA_E-fasciculatus_F_contig12566.1964.1|Name=mRNA_E-fasciculatus_F_contig12566.1964.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3390bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12566:455..3844- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12566:455..3844- >mRNA_E-fasciculatus_F_contig12566.1964.1 ID=mRNA_E-fasciculatus_F_contig12566.1964.1|Name=mRNA_E-fasciculatus_F_contig12566.1964.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1218bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12566:455..3844- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |