mRNA_E-fasciculatus_F_contig12565.1963.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: A0A6H5K5N1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5N1_9PHAE) HSP 1 Score: 236 bits (602), Expect = 7.840e-70 Identity = 111/117 (94.87%), Postives = 116/117 (99.15%), Query Frame = 1
Query: 4 NLLHDKEALEGVAKAANKDVPDAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGVEDEELMRVQAAK 354
+LLHDKEALEGVA+AANKDVPDAVN+YFGPYIGIYFAWLRFYTKALLIPTVGG+FLFVDQMRTGSPDS LLPIFC+LIMVWVALFLDVWRRRNNEIAFRWGVDGVEDEELMRVQAAK
Sbjct: 341 SLLHDKEALEGVARAANKDVPDAVNAYFGPYIGIYFAWLRFYTKALLIPTVGGMFLFVDQMRTGSPDSQLLPIFCVLIMVWVALFLDVWRRRNNEIAFRWGVDGVEDEELMRVQAAK 457
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: A0A1V9ZXU1_9STRA (Anoctamin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXU1_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.740e-23 Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 37 VAKAANKDVPDAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGVEDEELMR 339
V A N+ + D V YFG I YFAWL YT+ LL+PT+ G+FLF Q+++ S D P+ P + + + +W + FL W+RR N +A+RWGV G EDEE++R
Sbjct: 253 VFNALNQPLDD-VAMYFGEKIAFYFAWLEMYTQWLLLPTIVGIFLFWQQVQSQSLDQPMAPFYALFMALWASAFLVAWKRRANTLAYRWGVLGYEDEEVLR 352
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: A0A485LLE1_9STRA (Aste57867_21126 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLE1_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.700e-21 Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 28 LEGVAKAA--NKDVP-DAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGVEDEE 330
L VA+A + D P D V YFG + YFAW+ YT+ L+ PT+ G+ LF+ Q+R+ S D PL P + + + VW +LFL W+RR + +A+RWGV G ED++
Sbjct: 301 LRKVARAVRYSLDQPLDDVAEYFGDKVAFYFAWVELYTRWLVPPTLVGILLFLQQIRSQSLDQPLAPFYALFMAVWASLFLVAWKRRASSLAYRWGVLGYEDDD 404
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: A0A5A8E694_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E694_CAFRO) HSP 1 Score: 97.1 bits (240), Expect = 4.770e-21 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 28 LEGVAKAANKDVP-DAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGVEDEELMRVQ 345
L+ + A D P D + +YFG + YFAWL FYT+ L+ P + G LFV Q+ G+ D +P+F + + +W LFL+ W+RRN E+A RWGV E EE+ R Q
Sbjct: 496 LDRIGPAPADDTPLDRIAAYFGETVAFYFAWLEFYTQWLVFPALVGAALFVAQVWYGTVDVTWVPLFSLFMALWSTLFLEFWKRRNAELAHRWGVLNYEHEEVTRPQ 602
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: A0A812T4N2_9DINO (Ano10 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812T4N2_9DINO) HSP 1 Score: 94.0 bits (232), Expect = 5.710e-20 Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 67 DAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGVEDEELMRVQ 345
D + +YFG + YFAWL FYT+ L+ P + G LFV Q+ G+ D +P+F + + +W LFL+ W+RRN E+A RWGV E EE+ R Q
Sbjct: 357 DRIAAYFGETVAFYFAWLEFYTQWLVFPALVGAALFVAQVWYGTVDVTWVPLFSLFMALWSTLFLEFWKRRNAELAHRWGVLNYEHEEVTRPQ 449
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: A0A5A8DR02_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DR02_CAFRO) HSP 1 Score: 94.0 bits (232), Expect = 5.820e-20 Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 67 DAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGVEDEELMRVQ 345
D + +YFG + YFAWL FYT+ L+ P + G LFV Q+ G+ D +P+F + + +W LFL+ W+RRN E+A RWGV E EE+ R Q
Sbjct: 797 DRIAAYFGETVAFYFAWLEFYTQWLVFPALVGAALFVAQVWYGTVDVTWVPLFSLFMALWSTLFLEFWKRRNAELAHRWGVLNYEHEEVTRPQ 889
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: A0A1W4WDH1_AGRPL (Anoctamin n=3 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4WDH1_AGRPL) HSP 1 Score: 86.3 bits (212), Expect = 2.790e-17 Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 10 LHDKEALEGVAKAANKDV-----PDAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGV 318
LHD+E L+ + ++ + V D + YFG I +YF +L FYT ALL PT G + + T LP+FCI ++WV +FL++WRR++NE+A++WG G+
Sbjct: 234 LHDQEHLKKLGRSWYRSVFQKQPLDEIKIYFGESIALYFTFLGFYTTALLFPTFLGFVQLLVSIET-------LPVFCIFNVIWVTVFLEMWRRKSNELAYKWGTIGM 334
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: A0A8J9TR55_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9TR55_BRAAE) HSP 1 Score: 85.9 bits (211), Expect = 3.790e-17 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 10 LHDKEALEGVAK----AANKDVP-DAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGV 318
LHD+EAL+ + + + K P + + YFG I +YF +L FYTKALLIP G+ + T +P FC+ +VWV L L++WRR++NE+AF+WG G+
Sbjct: 214 LHDEEALKKLGRKWYRSLFKTQPIEEIRLYFGEGIALYFQFLAFYTKALLIPVFLGLLQIFVSIET-------VPFFCVFNVVWVTLLLEIWRRKSNELAFKWGTIGM 314
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: N6U695_DENPD (Anoctamin (Fragment) n=4 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6U695_DENPD) HSP 1 Score: 84.7 bits (208), Expect = 9.500e-17 Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 10 LHDKEALEGVAKA------ANKDVPDAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGV 318
LHD E L+ +A + + + D + YFG I +YFA+L +YT AL++P+V G+F G + +P FCI ++WV LFL+VW+R++NE+AF+WG G+
Sbjct: 180 LHDDEELKKLAGSWYMPRWFKQPIGD-IKEYFGESIALYFAFLEYYTLALVVPSVLGLF--------GYIFTETVPFFCIFNVIWVTLFLEVWKRKSNELAFKWGTIGM 279
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Match: A0A482RUE1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUE1_9ARCH) HSP 1 Score: 84.7 bits (208), Expect = 1.000e-16 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 67 DAVNSYFGPYIGIYFAWLRFYTKALLIPTVGGVFLFVDQMRTGSPDSPLLPIFCILIMVWVALFLDVWRRRNNEIAFRWGVDGVEDEELMRVQ 345
D + YFG + YFA++ FYT+ L+ P++ GV +F Q+ TG D L I+ +L+MVW+ L WR++ + +A++WGV E EE R Q
Sbjct: 387 DNIAEYFGEGVAFYFAFMAFYTRWLVFPSILGVCVFAVQVTTGQSDHILCAIYAVLVMVWICFMLAFWRQKQSALAYKWGVLDYEVEETERPQ 479 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12565.1963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12565.1963.1 >prot_E-fasciculatus_F_contig12565.1963.1 ID=prot_E-fasciculatus_F_contig12565.1963.1|Name=mRNA_E-fasciculatus_F_contig12565.1963.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=118bp ANLLHDKEALEGVAKAANKDVPDAVNSYFGPYIGIYFAWLRFYTKALLIPback to top mRNA from alignment at E-fasciculatus_F_contig12565:54..1045- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12565.1963.1 ID=mRNA_E-fasciculatus_F_contig12565.1963.1|Name=mRNA_E-fasciculatus_F_contig12565.1963.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=992bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12565:54..1045- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12565:54..1045- >mRNA_E-fasciculatus_F_contig12565.1963.1 ID=mRNA_E-fasciculatus_F_contig12565.1963.1|Name=mRNA_E-fasciculatus_F_contig12565.1963.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=708bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12565:54..1045- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |