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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-27_005520.1 |
| Exons | 4 |
| Model size | 1376 |
| Cds size | 756 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1256.1960.1 >prot_E-fasciculatus_F_contig1256.1960.1 ID=prot_E-fasciculatus_F_contig1256.1960.1|Name=mRNA_E-fasciculatus_F_contig1256.1960.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=252bp
MSLNTDVEPWSNSSPHPSGAKNKSMLLKARWRTGIGPPPSQGWDEAHGDS
GLPRSCDGWESGHFSSAFATASRGTTAKRRADGRWRGKENSRPYRTEPRE
NSQQGKQSSHPGLAIGPLQVSSVALRPYAHGELYRRPPQRISGRTPLMAP
GAALASSLGPIEPHGFDPRRLDKEALCIGNGISRGASLTSQSAALRQKQL
QFRHRAYQSTHKSAGLVRLISVMREDASSVATTGGGRDSGSRCSSRHRQR
Q* back to topmRNA from alignment at E-fasciculatus_F_contig1256:16780..19053+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1256.1960.1 ID=mRNA_E-fasciculatus_F_contig1256.1960.1|Name=mRNA_E-fasciculatus_F_contig1256.1960.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2274bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1256:16780..19053+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCGGGTTCCGGATCCGTTGCTTCTCTCCCAGCTGTTCTCTCCTTCAGGGG
CAAGATCACCCAGAACATTCGAGGCCTGTCCCACGAGCCCCTACCAATGA
GCCTGAACACTGACGTTGAACCATGGTCGAACTCCTCACCCCATCCCTCG
GGCGCTAAAAACAAATCGATGTTGCTGAAGGCTCGATGGCGTACGGGTAT
CGGACCTCCCCCTAGCCAAGGCTGGGATGAGGCACATGGCGACAGCGGCC
TACCTCGGAGCTGCGATGGCTGGGAAAGTGGTCATTTCTCCTCAGGTACT
ACTCTCACGGTATTGTGCTGCGGGGAAGGGGGTCATGTGCTTGTCTCCAG
TGAACCTTACTTCGACTCGGCACACTCATCTCCAAATGCGTTCTTCGCGC
TCAACACCGTCTACAATTCTGCTGTTGTTGCAGAACTACGAAGTACTACT
GTAGAATACCTACAAAAAAACAAGCTGTGCTGATCTCCGTTTGAACGCCG
TAAGAAAATAAATTACACAGATTGCCTGCACTTTAACACACCATCTAACT
GCACGGTATGGTAATATTCCACTGCTATTCCTCGGCACAGCATTTGCCAC
CGCTTCGCGAGGCACAACGGCAAAACGAAGAGCGGACGGTCGCTGGCGAG
GCAAGGAAAACAGCCGCCCCTATCGAACTGAACCACGGGAAAATAGCCAG
CAGGGTAAACAGTCGTCCCACCCAGGCCTTGCGATCGGCCCTCTGCAAGT
ATCGTCTGTGGCCTTGCGACCATACGCTCACGGAGAGCTATATAGAAGGT
GGGCAGCCCTTTGTGTTCCGCCCTGTACACCAAACCATATCACACAAACG
TAGATTGGATGCTGCGAAGACGATCGTTCTGCAGCATCTTGTCGGGCAGG
ACTGGATGCATGCATTTGTTTCCTACCTGAAGACGGCGAAACCCTGCAAA
ATAATATCGTCACCCCTTGCCTAGCCCTCACATTGTAATCCAACCCGGGG
TTGCTGATGAAACAGGCCACCGCAACGAATATCCGGCCGGACGCCCTTGA
TGGCCCCTGGAGCCGCGCTTGCTTCTTCACTGGGTCCTATCGAACCACAT
GGCTTCGACCCCCGACGCCTCGACAAAGAGGCTCTTTGCATAGGTAACGG
GATCTCTCGGGGAGCTTCACTTACAAGGTACGGTTTGGGTAGCGAGCACG
AAGGGCGTGTAACTTGTCGTTCTTGGAGAGGGTATCAACGCTCGTTGTTG
TCGCTCTCACACTTGTTGTTGATATCGCTTTGATTGGCAACTACACACTG
CATGTCGTGAGAATGGGAATGCGTGCGGCAGAATCGACCGATACGTTCAA
TTGCGATTCCCATGTCATGTCCTGCATCTAGATCATCAGCCCTTTATTCT
ACCCAACAAGCAGTTGTTGTTGATTCTTGGTGTGATTAGGCTCCCGTCTT
GCCACGCATGTATCACTCACTGCGCCGGACGTGTATTGCACGCGCGCACG
TTTCCACACCCAAACACGGTTCAATTTTGTTCTGTTGCTCCTTCTGTGTG
GAACATCTCCCAGCCAATCCGCGGCCTTGAGGCAGAAGCAGCTGCAGTTT
CGACATCGGGCATACCAGAGCACTCACAAGTCGGCGGGCTTGGTGCGGTT
GATATCTGTCATGAGGGAGGACGCGTCCTCCGTGGCTACCACAGGCGGAG
GAAGAGATTCGGGATCACGTTGTAGTAGTCGCCACAGGCAGCGGCAATAG
CATGGTTAGAGGGTGTGGGGAGTTACTCTGACTCAGCCCCGCCCTCGAGG
ATCTTGTTCATTGCAAGTGCAGGGAAAAAAAGGGAGGCAACACTCACTCG
TATTTTTCTTGATCGCCACTTGTTGGTGTCCTCGTGAAGGAAGAGCAGGG
TTTCAAGCTGGCGCTTCTCTTCCAACATGGTTTGTGTGTGTGTACAATCC
GCTTGTGCGCGAGACACGGCGAAGGGTAATGGGATGGACACCAACAGCGC
TCGAACTGCACCCGGTCGTGGGCTGCATTATTATTGCTCTATACGTCGTT
TTTGGTGTCATCGACATTTAACGCAAGATGGGGTATCAACAGTGACTGAC
GCGCAGGTAGGGACTGCGGTAGCGACTCGTATTAGTACAAAAGTGCTGCC
ATGGTTGGCGCTTGTACTGTTGTATTGCGGTTTTTAGCTAGTGAGCTTAA
CCCTCCTAGTACTGGAAGCCCTTTTGGGGACACTTTGGGGACACACAACT
CAAATGCCTATTTACCGGTCACCC back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1256:16780..19053+ >mRNA_E-fasciculatus_F_contig1256.1960.1 ID=mRNA_E-fasciculatus_F_contig1256.1960.1|Name=mRNA_E-fasciculatus_F_contig1256.1960.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1256:16780..19053+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGCCTGAACACTGACGTTGAACCATGGTCGAACTCCTCACCCCATCC
CTCGGGCGCTAAAAACAAATCGATGTTGCTGAAGGCTCGATGGCGTACGG
GTATCGGACCTCCCCCTAGCCAAGGCTGGGATGAGGCACATGGCGACAGC
GGCCTACCTCGGAGCTGCGATGGCTGGGAAAGTGGTCATTTCTCCTCAGA
TGAGCCTGAACACTGACGTTGAACCATGGTCGAACTCCTCACCCCATCCC
TCGGGCGCTAAAAACAAATCGATGTTGCTGAAGGCTCGATGGCGTACGGG
TATCGGACCTCCCCCTAGCCAAGGCTGGGATGAGGCACATGGCGACAGCG
GCCTACCTCGGAGCTGCGATGGCTGGGAAAGTGGTCATTTCTCCTCAGCA
TTTGCCACCGCTTCGCGAGGCACAACGGCAAAACGAAGAGCGGACGGTCG
CTGGCGAGGCAAGGAAAACAGCCGCCCCTATCGAACTGAACCACGGGAAA
ATAGCCAGCAGGGTAAACAGTCGTCCCACCCAGGCCTTGCGATCGGCCCT
CTGCAAGTATCGTCTGTGGCCTTGCGACCATACGCTCACGGAGAGCTATA
TAGAAGCATTTGCCACCGCTTCGCGAGGCACAACGGCAAAACGAAGAGCG
GACGGTCGCTGGCGAGGCAAGGAAAACAGCCGCCCCTATCGAACTGAACC
ACGGGAAAATAGCCAGCAGGGTAAACAGTCGTCCCACCCAGGCCTTGCGA
TCGGCCCTCTGCAAGTATCGTCTGTGGCCTTGCGACCATACGCTCACGGA
GAGCTATATAGAAGGCCACCGCAACGAATATCCGGCCGGACGCCCTTGAT
GGCCCCTGGAGCCGCGCTTGCTTCTTCACTGGGTCCTATCGAACCACATG
GCTTCGACCCCCGACGCCTCGACAAAGAGGCTCTTTGCATAGGTAACGGG
ATCTCTCGGGGAGCTTCACTTACAAGGCCACCGCAACGAATATCCGGCCG
GACGCCCTTGATGGCCCCTGGAGCCGCGCTTGCTTCTTCACTGGGTCCTA
TCGAACCACATGGCTTCGACCCCCGACGCCTCGACAAAGAGGCTCTTTGC
ATAGGTAACGGGATCTCTCGGGGAGCTTCACTTACAAGCCAATCCGCGGC
CTTGAGGCAGAAGCAGCTGCAGTTTCGACATCGGGCATACCAGAGCACTC
ACAAGTCGGCGGGCTTGGTGCGGTTGATATCTGTCATGAGGGAGGACGCG
TCCTCCGTGGCTACCACAGGCGGAGGAAGAGATTCGGGATCACGTTGTAG
TAGTCGCCACAGGCAGCGGCAATAGCCAATCCGCGGCCTTGAGGCAGAAG
CAGCTGCAGTTTCGACATCGGGCATACCAGAGCACTCACAAGTCGGCGGG
CTTGGTGCGGTTGATATCTGTCATGAGGGAGGACGCGTCCTCCGTGGCTA
CCACAGGCGGAGGAAGAGATTCGGGATCACGTTGTAGTAGTCGCCACAGG
CAGCGGCAATAG back to top
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