prot_E-fasciculatus_F_contig1256.1959.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1256.1959.1
Unique Nameprot_E-fasciculatus_F_contig1256.1959.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length712
Homology
BLAST of mRNA_E-fasciculatus_F_contig1256.1959.1 vs. uniprot
Match: D8LB22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB22_ECTSI)

HSP 1 Score: 1009 bits (2608), Expect = 0.000e+0
Identity = 586/711 (82.42%), Postives = 605/711 (85.09%), Query Frame = 0
Query:    1 MTDFEKWGRFDADAAEKEIERKAVVEEAKRVIIAEERLVLKYCQDRAARLKSEAVVSALKAKRGSRRRSATTTXTTGNNTGEGGSLDGTPKNVDASFARTSADEAQAILKGLQRGLELRDEVVADAEAGNLHRGTQTARECLVELSAAQNLLGKVAAVVSPGGTGDDHSSETQGAAGATGGTSCGHSGHDHAXXXXXXXXXXXXXXXXSTGHAGQGCASDCGGGVRGKLAAVGVPAQADGMENHEAEEIPKALEVLRRAKAACRVAEAACLLRGGRVAQSTEVLRELLFEDSKRVAAWVARGESFLAMNAPLLAGLHFDRALELDKGCVAASSHKENLRQASSNGTSAASATCADELHQTPASAGDTDATPQKATIYYSAPSLTPGSPTKLFSRIGCGGNVGDQGDLAATGGVGVEKPAPAEDGAVFTMEATEDPAVAAEMPDEEGNPGVAATASASSSGREGRAAASCANDDGGSATEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLEDLDKATAAGLGVPVAVARQGNGGESATGERLSMDDGCGDGCEELGGDCEEELSGSEVWVTSKGGGECGKVGGASTVVRNMRVGCHLNIAACFLLRKTDFESAVNHCTRALVVEPGNTRALVRRAQAHQELGYFRLAVEDLEAAEASVSASVRDCHRRREERETLAGELAEVVKRLEHARWTKVHVGNGKDELPRV 711
            MTDFEKW RFDADAAEKEIERKAVVEEAKRVIIAEE+LVLKYCQDRAARLKSEAVVSALKAKRGSRRRSATTT  TGN T +G SLDG PKNV A  ARTSADEA AILKGL+RGLELRDE+VADAEAGN HRGT+TARECLVELSAAQ LLGKV AVVSPG TGD+H S TQGAAGATGGT CGH GHD  XXXXXXXXXX       TGH GQGCASD GGGVRGK AA GVPAQADG EN E EEIPKALEVLRRAKAACRVAEAACLLRGGRVAQSTEVLRELLFEDSK VAAWVARGESFLAMNAPLLAGLHFDRALELDKGCVAA++HK+NLR  SS GTSAASA CADE HQTPA+AGDTDA PQK TI++       GSPT L SR+GCGGNVGDQG LA  G VGVE PAPAEDGA+FT EATEDPAVAAE PDEEGNPGVA TA+A       RAAA   NDDGGS TEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLE LDKATAAGLG+  AVARQ  GGESA G+  S   GCGDGCE L G  EE  SGS+V  TSK GGE GK G A TVVRNMRVGCHLNIAA FLLRKTD ESA  HCTRALVVEPGN+RALVRRAQAHQELGYFRLAVEDLEAAEASV ASVRD HRR E  E LAGELAEVVKRLEHARWTKVHVGNG DELPRV
Sbjct:    1 MTDFEKWDRFDADAAEKEIERKAVVEEAKRVIIAEEQLVLKYCQDRAARLKSEAVVSALKAKRGSRRRSATTTEATGN-TEDGVSLDGAPKNVGALVARTSADEAHAILKGLRRGLELRDEIVADAEAGNFHRGTRTARECLVELSAAQKLLGKVVAVVSPGDTGDNHGSATQGAAGATGGTCCGHGGHDXXXXXXXXXXXXSV----DTGHVGQGCASDSGGGVRGKSAATGVPAQADGRENDEPEEIPKALEVLRRAKAACRVAEAACLLRGGRVAQSTEVLRELLFEDSKSVAAWVARGESFLAMNAPLLAGLHFDRALELDKGCVAAATHKQNLRHVSSKGTSAASAACADESHQTPAAAGDTDAAPQKMTIHH-------GSPTNLSSRVGCGGNVGDQGSLAVAGDVGVETPAPAEDGAIFTTEATEDPAVAAETPDEEGNPGVAPTAAAXXXXXXDRAAARGVNDDGGSVTEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLEALDKATAAGLGMHAAVARQDKGGESAAGQSPSEKAGCGDGCEGLDGKSEEASSGSQVRATSKCGGERGKGGHAVTVVRNMRVGCHLNIAASFLLRKTDLESAAIHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASVLASVRDGHRRGEGSEALAGELAEVVKRLEHARWTKVHVGNGNDELPRV 699          
BLAST of mRNA_E-fasciculatus_F_contig1256.1959.1 vs. uniprot
Match: A0A6D2IMG4_9BRAS (PB1 domain-containing protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2IMG4_9BRAS)

HSP 1 Score: 58.5 bits (140), Expect = 4.020e-5
Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 0
Query:  601 HLNIAACFL-LRKTDFESAVNHCTRALVVEPGNTRALVRRAQAHQELGYFRLAVEDL 656
            H N AAC + ++  D+ES ++ CT AL V+PG TRAL+RRA+A + +G F LAV+D+
Sbjct:   94 HSNRAACLMQMKPIDYESVISECTIALKVQPGFTRALLRRARALEAVGKFELAVQDV 150          
BLAST of mRNA_E-fasciculatus_F_contig1256.1959.1 vs. uniprot
Match: A0A151PAZ0_ALLMI (Peptidyl-prolyl cis-trans isomerase D n=8 Tax=Crocodylia TaxID=1294634 RepID=A0A151PAZ0_ALLMI)

HSP 1 Score: 57.4 bits (137), Expect = 5.210e-5
Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 0
Query:  600 CHLNIAACFLLRKTDFESAVNHCTRALVVEPGNTRALVRRAQAHQELGYFRLAVEDLEAAE 660
            C LN+AAC  L+++D++  + +C+ AL ++PGNT+AL RRAQA Q +  F  A+ D++ A+
Sbjct:  275 CILNVAAC-KLKQSDWQGTIENCSEALAIDPGNTKALYRRAQAWQGIKDFDQALADIKKAQ 334          
BLAST of mRNA_E-fasciculatus_F_contig1256.1959.1 vs. uniprot
Match: A0A565AXD3_9BRAS (PB1 domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565AXD3_9BRAS)

HSP 1 Score: 58.2 bits (139), Expect = 5.320e-5
Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 0
Query:  603 NIAACFL-LRKTDFESAVNHCTRALVVEPGNTRALVRRAQAHQELGYFRLAVEDLEA 658
            N AAC + ++  D+ES ++ CT AL V+PG TRAL+RRA+A + +G F LAV+D+ A
Sbjct:   97 NRAACLMHMKPIDYESVISECTMALKVQPGFTRALLRRARAFEAVGKFDLAVQDVNA 153          
BLAST of mRNA_E-fasciculatus_F_contig1256.1959.1 vs. uniprot
Match: UPI000901149B (TPR repeat-containing thioredoxin TTL4 isoform X5 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000901149B)

HSP 1 Score: 55.1 bits (131), Expect = 9.580e-5
Identity = 29/69 (42.03%), Postives = 41/69 (59.42%), Query Frame = 0
Query:  600 CHLNIAACFLLRKTDFESAVNHCTRALVVEPGNTRALVRRAQAHQELGYFRLAVEDLEAAEASVSASVR 668
            CHLN   CFL +   +E  +  CT+AL + P  T+ALVRRA+AH++L +F    ED    E  ++ S R
Sbjct:  145 CHLNSGVCFL-KLCKYEETIKECTKALELNPTYTKALVRRAEAHEKLEHF----EDAVTGEFMIARSSR 208          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1256.1959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LB22_ECTSI0.000e+082.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6D2IMG4_9BRAS4.020e-550.88PB1 domain-containing protein n=5 Tax=Coluteocarpe... [more]
A0A151PAZ0_ALLMI5.210e-544.26Peptidyl-prolyl cis-trans isomerase D n=8 Tax=Croc... [more]
A0A565AXD3_9BRAS5.320e-550.88PB1 domain-containing protein n=1 Tax=Arabis nemor... [more]
UPI000901149B9.580e-542.03TPR repeat-containing thioredoxin TTL4 isoform X5 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 295..328
e-value: 51.0
score: 8.7
coord: 598..632
e-value: 13.0
score: 14.0
coord: 633..666
e-value: 170.0
score: 4.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 578..686
e-value: 2.8E-17
score: 64.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 194..378
e-value: 8.8E-6
score: 27.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 597..660
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 265..658
IPR039663AIP/AIPL1PANTHERPTHR11242ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATEDcoord: 595..663

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1256contigE-fasciculatus_F_contig1256:11886..16600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1256.1959.1mRNA_E-fasciculatus_F_contig1256.1959.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1256 11524..16656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1256.1959.1 ID=prot_E-fasciculatus_F_contig1256.1959.1|Name=mRNA_E-fasciculatus_F_contig1256.1959.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=712bp
MTDFEKWGRFDADAAEKEIERKAVVEEAKRVIIAEERLVLKYCQDRAARL
KSEAVVSALKAKRGSRRRSATTTATTGNNTGEGGSLDGTPKNVDASFART
SADEAQAILKGLQRGLELRDEVVADAEAGNLHRGTQTARECLVELSAAQN
LLGKVAAVVSPGGTGDDHSSETQGAAGATGGTSCGHSGHDHAHAHAHAHA
HAHHEHAHSTGHAGQGCASDCGGGVRGKLAAVGVPAQADGMENHEAEEIP
KALEVLRRAKAACRVAEAACLLRGGRVAQSTEVLRELLFEDSKRVAAWVA
RGESFLAMNAPLLAGLHFDRALELDKGCVAASSHKENLRQASSNGTSAAS
ATCADELHQTPASAGDTDATPQKATIYYSAPSLTPGSPTKLFSRIGCGGN
VGDQGDLAATGGVGVEKPAPAEDGAVFTMEATEDPAVAAEMPDEEGNPGV
AATASASSSGREGRAAASCANDDGGSATEDVRRFVAAACEDYRAGVVLHQ
EGFLSSSRQRFLRVLEDLDKATAAGLGVPVAVARQGNGGESATGERLSMD
DGCGDGCEELGGDCEEELSGSEVWVTSKGGGECGKVGGASTVVRNMRVGC
HLNIAACFLLRKTDFESAVNHCTRALVVEPGNTRALVRRAQAHQELGYFR
LAVEDLEAAEASVSASVRDCHRRREERETLAGELAEVVKRLEHARWTKVH
VGNGKDELPRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039663AIP/AIPL1
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat