prot_E-fasciculatus_F_contig12551.1956.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12551.1956.1
Unique Nameprot_E-fasciculatus_F_contig12551.1956.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length248
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12551.1956.1 vs. uniprot
Match: D8LC49_ECTSI (TPR Domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC49_ECTSI)

HSP 1 Score: 426 bits (1096), Expect = 9.100e-145
Identity = 225/247 (91.09%), Postives = 231/247 (93.52%), Query Frame = 0 
Query:    1 LGVEREHLGQLDAAIASYKDARSAADQHLGPESPIAKGIEIALEKASAAAVTAASYSRKRAASRSRVAVSSFPCIGKLKFGKKNSQVVSSSRFGGEGLSPRCRSQQQQHGEETAEEATARDLLEYAYTSPRPCPAPPHKASWARLGHVPTPRSAPPARSASRGPQRAGRWTSVDAPAARAVKEAQRRSEGWRNGGRQRGGVDGDLRWRALACAEWQCSPREALHAQRQVAEQHGVDVGVASPTGDAT 247
            LGVEREHLGQLDAAIASYK ARSAADQHLGPESP+AKGIE ALEKASAAA TAASYSRKRAASRSRVAVSSFPCIGKLKFG+KNSQV   SRF G GLSPRCRSQQQ HGEE   EATARDLLE+AYTSPRPCPAPPHK SWARLGHVPTPRSAPPARSASRGPQRAGRWTSVD PAARA+KEAQRRSEGWRNGGR+RG VDGDLRWRALACAEWQCSPREALHAQRQVAEQHGVDVGVA+PT DAT
Sbjct:  353 LGVEREHLGQLDAAIASYKYARSAADQHLGPESPVAKGIETALEKASAAAATAASYSRKRAASRSRVAVSSFPCIGKLKFGQKNSQVP--SRFDGVGLSPRCRSQQQ-HGEEVVGEATARDLLEHAYTSPRPCPAPPHKGSWARLGHVPTPRSAPPARSASRGPQRAGRWTSVDTPAARAMKEAQRRSEGWRNGGRKRGDVDGDLRWRALACAEWQCSPREALHAQRQVAEQHGVDVGVAAPTSDAT 596
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12551.1956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC49_ECTSI9.100e-14591.09TPR Domain containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12551contigE-fasciculatus_F_contig12551:3227..3970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12551.1956.1mRNA_E-fasciculatus_F_contig12551.1956.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12551 3227..3970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12551.1956.1 ID=prot_E-fasciculatus_F_contig12551.1956.1|Name=mRNA_E-fasciculatus_F_contig12551.1956.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=248bp
LGVEREHLGQLDAAIASYKDARSAADQHLGPESPIAKGIEIALEKASAAA
VTAASYSRKRAASRSRVAVSSFPCIGKLKFGKKNSQVVSSSRFGGEGLSP
RCRSQQQQHGEETAEEATARDLLEYAYTSPRPCPAPPHKASWARLGHVPT
PRSAPPARSASRGPQRAGRWTSVDAPAARAVKEAQRRSEGWRNGGRQRGG
VDGDLRWRALACAEWQCSPREALHAQRQVAEQHGVDVGVASPTGDAT*
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