mRNA_E-fasciculatus_F_contig12547.1951.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: D8LCV6_ECTSI (Alanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV6_ECTSI) HSP 1 Score: 485 bits (1249), Expect = 2.030e-161 Identity = 251/256 (98.05%), Postives = 254/256 (99.22%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTWSTTTGNKV 768
+LQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDV LKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFV+EIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSS TIPGDTAFFLYDSMGFPLDLTQVMA+EVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTWSTTTGNKV
Sbjct: 397 ILQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVGLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVMEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSNTIPGDTAFFLYDSMGFPLDLTQVMAEEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTWSTTTGNKV 652
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: A0A7S3XMY7_HETAK (Alanine--tRNA ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMY7_HETAK) HSP 1 Score: 318 bits (815), Expect = 1.070e-99 Identity = 163/248 (65.73%), Postives = 197/248 (79.44%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTW 744
+LQD+ SNYDTDVF PLFDAIQ VTG P Y GK+G ED DLKDTAYRV+ADH R LSFAI DGAVP+N+GRGYVLRR+LRRAVR+GQ +L A GFFQ++VP V A FGD +PELRE++A V +IKEEE+AFS++LERG+K+FKE+E E + +PGD AFFLYD++GFP+DLT +MA+EVG+ VD+ GF EMA QK RS+ A R A G G A+ALGA+ET+RLA EGV PTDD AKY W
Sbjct: 312 ILQDRSSNYDTDVFVPLFDAIQKVTGAPAYTGKLGAEDADLKDTAYRVLADHVRTLSFAIADGAVPSNEGRGYVLRRVLRRAVRFGQQLLGAERGFFQRLVPAVAAAFGDAFPELREQQAKVEAVIKEEEDAFSALLERGVKYFKEMEAELKAAGEARVPGDRAFFLYDTLGFPVDLTALMAEEVGLEVDQAGFEREMAEQKERSRAAGKRRAADGRG--ALALGAEETARLAAEGVAPTDDAAKYAW 557
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: A0A7S1H736_HEMAN (Alanine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H736_HEMAN) HSP 1 Score: 285 bits (730), Expect = 1.080e-92 Identity = 148/248 (59.68%), Postives = 186/248 (75.00%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTW 744
+LQDK SNYDTDVF PLF AI++ G PY GK+G EDV LKDTAYRV+ADHAR L+FAITDGAVP+N+GRGYVLRRILRRAVRYGQ +L APPGFF +VPVVV F + +PEL ++ FV+E + EEEE+F ML GIK+F E+ ++ +G+ + G++AF+LYD+MGFP+DLTQVMA+E GMTVD F EM AQK RS++A +++AG + L A ET L + GV TDD+AKY W
Sbjct: 56 VLQDKPSNYDTDVFQPLFKAIEEKLGVEPYAGKLGKEDVGLKDTAYRVIADHARTLTFAITDGAVPSNEGRGYVLRRILRRAVRYGQQMLGAPPGFFTSLVPVVVDVFKEAFPELEGRKDFVMETLAEEEESFEKMLTSGIKYFNELSDDMKGRKETVVSGESAFYLYDTMGFPVDLTQVMAEEKGMTVDVAAFEGEMKAQKQRSRDAALQKKSAGGAP--LVLEAAETDVLQKGGVAVTDDKAKYEW 301
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: A0A448Z8F1_9STRA (Alanine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8F1_9STRA) HSP 1 Score: 293 bits (749), Expect = 1.250e-90 Identity = 149/248 (60.08%), Postives = 188/248 (75.81%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTW 744
+LQDK SNYDTDVFGP+F+ ++ + YEGK+G+ED LKDTAYR +ADH R LSFAI DGAVP N+GRGYVLRRILRRA RYGQ +LKA PGFFQK++PVVV FG+ YPEL + +A + EII EEE AFS+ML+RGIK F E+EEE + +PG AF+LYD++GFP+DLT++MA+E G+T+D +GFANEM QK RS+ A AA ++ GA + L A++TS LA+ V PTDD KY W
Sbjct: 72 ILQDKSSNYDTDVFGPIFNELEKYSKVGSYEGKLGEEDATLKDTAYRAIADHIRTLSFAIADGAVPNNEGRGYVLRRILRRATRYGQQILKAEPGFFQKLIPVVVETFGEAYPELVKNQATITEIIAEEEAAFSTMLDRGIKFFGELEEELKADGKSEVPGKKAFYLYDTLGFPIDLTELMAEEAGLTLDSKGFANEMEEQKNRSRAARAAAKSGGAPQ--LELIAEQTSSLADNNVLPTDDGFKYKW 317
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: B8LD66_THAPS (Alanine--tRNA ligase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD66_THAPS) HSP 1 Score: 289 bits (740), Expect = 4.220e-88 Identity = 152/248 (61.29%), Postives = 186/248 (75.00%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTW 744
LLQ+K SNYD D F P+FDAI+ V PYEGK+G+ED LKDTAYR VADHAR L+FA+ DGAVP N+GRGYVLRRILRRA RYGQ +LK PGFF +VPVVV FG+ YPEL +A +IEI++EEEEAFS+ML+RGIK+F EEE K +PGD AFFLYD++GFP+DLT++MA E GMTVD +GF EM QK RS+EA A A G G + + L A++T+ LA+EG+ TDD +KY W
Sbjct: 246 LLQNKSSNYDIDAFTPIFDAIEKVANVGPYEGKLGEEDKTLKDTAYRAVADHARTLTFALADGAVPDNEGRGYVLRRILRRATRYGQQILKCEPGFFSTLVPVVVEIFGEHYPELIANQANIIEIVQEEEEAFSTMLDRGIKYF---EEEISDDKKKLVPGDKAFFLYDTLGFPIDLTELMATEAGMTVDMKGFEEEMEGQKQRSREARLA--AKGLGGQRLELIAEQTAWLADEGIADTDDSSKYDW 488
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: K0SS72_THAOC (Alanine--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SS72_THAOC) HSP 1 Score: 285 bits (730), Expect = 6.830e-88 Identity = 150/248 (60.48%), Postives = 187/248 (75.40%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTW 744
LLQDK SNYD D F P+FD I+ + G YEGK+G+ED LKDTAYR VADHAR L+FA+ DGAVP N+GRGYVLRRILRRA RYGQ +LK PGFF K+VPVVV +GD YPEL++ +A +IEI+KEEEEAFS+ML+RGIK+F EEE SK + G AFFLYD++GFP+DLT++MA+E GM+VD +GF EM QK RS++A A + AG R + A++T+ LA+EG+ TDD AKY W
Sbjct: 72 LLQDKSSNYDIDAFTPIFDEIERLAGVGGYEGKLGEEDSTLKDTAYRAVADHARTLTFALADGAVPDNEGRGYVLRRILRRATRYGQQILKCEPGFFAKLVPVVVETYGDAYPELKQNQANIIEIVKEEEEAFSTMLDRGIKYF---EEEINDSKSKIVSGGQAFFLYDTLGFPIDLTELMAEEAGMSVDMKGFEGEMEGQKKRSRDARLASKGL-AGERLEFI-AEQTAWLADEGIAVTDDSAKYLW 314
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: A0A7S1YSQ0_9STRA (Alanine--tRNA ligase n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YSQ0_9STRA) HSP 1 Score: 290 bits (742), Expect = 8.830e-88 Identity = 146/256 (57.03%), Postives = 190/256 (74.22%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTWSTTTGNKV 768
+LQDK SNYD D F P+F I++ + PY G V ++D L+DTAYR +ADHARALSFA+ DGAVP N+GRGYVLRRILRRA RYGQ +LKA PGFF ++PVVV FG+ YPEL + + ++EI+KEEEEAFS+ML+RGIK F E+E E + + K + GD AFFLYD++GFP+DLT++MA+E G+TVD +GF NEM AQK RS++A A +A G G + + A++T+ LAE GVK TDD +KY W T +
Sbjct: 329 ILQDKTSNYDIDAFAPIFRKIEEHSKVGPYGGLVLEDDTTLRDTAYRAIADHARALSFALADGAVPNNEGRGYVLRRILRRATRYGQQILKAEPGFFATLIPVVVDTFGEAYPELVKNQDTILEIVKEEEEAFSTMLDRGIKFFTELESELKEEGKKQVTGDKAFFLYDTLGFPIDLTELMAEEAGLTVDSDGFTNEMEAQKQRSRDARA--KAKGGGTKRLEFIAEQTAWLAENGVKATDDSSKYAWDVETAASI 582
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: A0A835ZLN6_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLN6_9STRA) HSP 1 Score: 288 bits (738), Expect = 1.590e-87 Identity = 152/246 (61.79%), Postives = 185/246 (75.20%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKY 738
+LQ + SNYDTD+F PLFDAI G PY G++G ED L+DTAYRVVADHAR L+FA+ DGAVP+N+GRGYVLRRILRRAVRYGQ +L AP GFFQ++VPVVV F +PEL+ +EA + E++ EEE +FS MLERGIK EV+ EQR S+ IPGD AFFLYD+MGFP+DLTQ+MA E G++VD EGF EMA Q+ RS+EA +RA G A+ A+ET+ LA GV PTDD AKY
Sbjct: 273 VLQSRSSNYDTDLFAPLFDAIHAAAGGAPYGGRLGAEDAGLRDTAYRVVADHARTLTFALADGAVPSNEGRGYVLRRILRRAVRYGQQILGAPEGFFQELVPVVVRSFSAAFPELKGQEAAIRELVTEEEASFSKMLERGIKFLGEVQAEQRASGSRLIPGDKAFFLYDTMGFPVDLTQLMAAEQGLSVDMEGFEAEMAEQRRRSREATRKQRADGGA--ALVFEAEETAWLAARGVAPTDDAAKY 516
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: A0A7S2VCE9_9STRA (Alanine--tRNA ligase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCE9_9STRA) HSP 1 Score: 281 bits (718), Expect = 5.300e-86 Identity = 142/249 (57.03%), Postives = 186/249 (74.70%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTWS 747
+LQDK SNYD D F PLF+ I +T PY G+VG +DVDLKDTAYR +ADHAR LSFAI DGAVP N+GRGYVLRRILRRA RYGQ +L PGFF +VP+VV FGD YPEL+E + ++EII EEE++FS+ML+RGIK F E+++E + + G+ AFFLYD++GFP+DLT++MA+E G+T+D GF EM QK RS++A+ A R+AGA + L A++T+ L++E V PTDD K+ W+
Sbjct: 78 ILQDKSSNYDIDCFQPLFEEIAKLTDKGPYTGRVGADDVDLKDTAYRAIADHARTLSFAIADGAVPNNEGRGYVLRRILRRAARYGQQILNCSPGFFVTLVPIVVDTFGDAYPELKENKQTILEIITEEEQSFSTMLDRGIKFFDELKDELKADGKSEVSGEKAFFLYDTLGFPIDLTELMAEEAGLTIDTAGFEKEMETQKERSRKAQRAARSAGAPD--LELQAEQTAWLSDESVLPTDDYFKFKWN 324
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Match: A0A7S0YZC8_9CRYP (Alanine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YZC8_9CRYP) HSP 1 Score: 283 bits (723), Expect = 6.940e-86 Identity = 147/248 (59.27%), Postives = 182/248 (73.39%), Query Frame = 1
Query: 1 LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVIEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSKTIPGDTAFFLYDSMGFPLDLTQVMAQEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTW 744
+LQDK SNYDTD+F PLF AI++ G PY GK+G EDV LKDTAYRV+ADHAR L+FAITDGAVP+N+GRGYVLRRILRRAVRYGQ +L APPGFF +VPVVV F D +PEL ++ FV+E + EEEE+F ML GIK+F E+ E+ K K + G++AF+LYD+MGFP+DLTQVMA+E G+TVD F EM AQK RS++A +++ G + L A ET L + GV TDD KY W
Sbjct: 265 VLQDKPSNYDTDIFAPLFKAIEEKLGVAPYAGKLGKEDVGLKDTAYRVIADHARTLTFAITDGAVPSNEGRGYVLRRILRRAVRYGQQMLGAPPGFFTSLVPVVVEAFKDAFPELEGRQDFVMETLAEEEESFEKMLTGGIKYFNELAEDMARKEDKVVSGESAFYLYDTMGFPVDLTQVMAEEKGLTVDVAAFEGEMEAQKQRSRDAALQKKSGGGAP--LVLEAAETDVLQKGGVPVTDDAQKYEW 510 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12547.1951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12547.1951.1 >prot_E-fasciculatus_F_contig12547.1951.1 ID=prot_E-fasciculatus_F_contig12547.1951.1|Name=mRNA_E-fasciculatus_F_contig12547.1951.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=256bp LLQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVDLKDTAYRVVAback to top mRNA from alignment at E-fasciculatus_F_contig12547:213..3736+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12547.1951.1 ID=mRNA_E-fasciculatus_F_contig12547.1951.1|Name=mRNA_E-fasciculatus_F_contig12547.1951.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3524bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12547:213..3736+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12547:213..3736+ >mRNA_E-fasciculatus_F_contig12547.1951.1 ID=mRNA_E-fasciculatus_F_contig12547.1951.1|Name=mRNA_E-fasciculatus_F_contig12547.1951.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1536bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12547:213..3736+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |