mRNA_E-fasciculatus_F_contig12541.1949.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: D7G2K2_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K2_ECTSI) HSP 1 Score: 521 bits (1341), Expect = 6.110e-175 Identity = 261/271 (96.31%), Postives = 266/271 (98.15%), Query Frame = 1
Query: 1 QNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNINPNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIRQSFMYSRWRLVAFNLEGVLARACALPELVHIPAETAAWLDSLSREPKNMVVVKSPRSRDTLDRLLGRTNCVLAAEHGAFIRWGKHARWQVCTIVQV 813
+NKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLN+NPNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIRQSFMYSRWRLVAFNLEGVLARACALPELVHIPAE AA LDSLSREPKNMVVVKSPRSRDTLDRLLGRTNCVLAAEHGAFIRWGKHARWQV +++
Sbjct: 512 RNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIRQSFMYSRWRLVAFNLEGVLARACALPELVHIPAEAAASLDSLSREPKNMVVVKSPRSRDTLDRLLGRTNCVLAAEHGAFIRWGKHARWQVSHFLEI 782
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: A0A6H5JHM9_9PHAE (GT20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM9_9PHAE) HSP 1 Score: 321 bits (823), Expect = 1.070e-105 Identity = 170/213 (79.81%), Postives = 171/213 (80.28%), Query Frame = 1
Query: 271 ELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIRQ---------------------------------------SFMYSRWRLVAFNLEGVLARACALPELVHIPAETAAWLDSLSREPKNMVVVKSPRSRDTLDRLLGRTNCVLAAEHGAFIRWGKHARWQ 792
ELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEF E+MIGAINMEENEREIRQ SFMYSRWRLVAFNLEGVLARACALPELVHIPAETAA LDSLSREPKNMVVVKSPRSRDTLDRLLGRTNCVLAAEHGAFIRWGKHA WQ
Sbjct: 42 ELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFAEKMIGAINMEENEREIRQAGCWSDFGGXXXXGRQLHDANEGWVRTTARLLQKEHVVMSFMYSRWRLVAFNLEGVLARACALPELVHIPAETAASLDSLSREPKNMVVVKSPRSRDTLDRLLGRTNCVLAAEHGAFIRWGKHAHWQ 254
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: A0A836CRD5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRD5_9STRA) HSP 1 Score: 243 bits (621), Expect = 8.630e-70 Identity = 162/421 (38.48%), Postives = 205/421 (48.69%), Query Frame = 1
Query: 7 KTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTG-PHSR---ERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNIN------------------------------------PNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEF---------------------TEQMIGAINMEENEREIRQS---------------------------------------------------------------------------------------FMYSRWRLVAFNLEGVLARACALPELVHIPAETAAWLDSLSREPKN-----------MVVVKSPRSRDTLDRLLGRTNCVLAAEHGAFIRWGKHARWQ 792
+ +LLGVD LDAT+GLV KFLAVEEMF+ +P LA+ V+F+QVC G HSR +R VL AQ+ GFV R+NSKL ++DE GPV+FFL++N EL ALY +ADVLVITPIRDGM++ PFEYVVSRE ATVVLSEFAGCARS+GGA+L+NPW T+ + ++ A++MEE+ER R S F +SR RL+ NLEGVLARA +LPEL+ +P + L LS +VVVKSPRSR+ L+R LG+TNCVLAAEHGA +RW ++RW+
Sbjct: 685 RRVLLGVDGLDATKGLVHKFLAVEEMFDREPRLAESVSFIQVCMGGGAHSRVAGDRQVLAAQIHGFVGRINSKLANLDEEGPVKFFLDVNLQFFVETSLQANVQLWKGRAMGLGLTGSXXXXXXXXXQELCALYCLADVLVITPIRDGMNISPFEYVVSREAHGALATVVLSEFAGCARSLGGALLVNPWATSXXXXXXXXXXXXXXXXXXXXXXVAKALMQAMDMEEDERAKRHSNMSSYVWDFTSDGXXXXXXXXXWSTRSMRQLVKGNEGGERTTARLLHKEHVVQPAECTVAAHLISMLTARFAYLTXXXXXXXXXXXAFAFSRCRLIVLNLEGVLARATSLPELLTVPPDVLESLRLLSEXXXXXXXXXXXXXXXVVVVKSPRSREALERCLGQTNCVLAAEHGALMRWSLNSRWE 1105
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: A0A7S1UL28_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UL28_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.650e-58 Identity = 129/331 (38.97%), Postives = 172/331 (51.96%), Query Frame = 1
Query: 7 KTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFT----GPHSRERMV------------------LEAQVQGFVARVNSKLGSIDEAGPVQFFLNINPNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFT---EQMIGAINMEENER------EIRQSFMYSRW--------------------------------------RLVAFNLEGVLARACALPELVHIPAETAAWLDSLSREPKNMVVVKSPRSRDTLDRLLGRTNCVLAAEHGAFIRWGKHARWQ 792
K ++LGVDSLD T+GLV K LA+EE + L + V FVQV G H+ V LEA + AR+NS+ S+ GP+ ++ EL ALY++AD L+ITPIRDGM+VVPF+YVV+R R A+VVLSEF GCARS+GGA+L+NPWNT E ++ + EE +R + + F RW R++ LEGV+A AC LPEL+ I A A L++L P N VV+ S RS +++D LLG N VL AE G FI+WGK + W+
Sbjct: 348 KKVILGVDSLDVTKGLVHKLLAIEEFLNTREDLVESVVFVQVALNATGGGAHAAATGVVVDPAVDAVASASASVASLEAHIARMAARINSQHCSLGSEGPLHLISHVTAEELMALYSVADTLLITPIRDGMNVVPFQYVVARHAARRLASVVLSEFTGCARSLGGALLVNPWNTQELAAALHHLLFDLEPEERQRNHDAMIQYVERFTSERWSERFLEQLAEANGDESRSPCRELHREQVLNAYVSSTSARVLVLGLEGVIAPACTLPELLTIGAAEYAALEALCANPTNAVVIVSTRSPESIDALLGNLNAVLVAESGWFIKWGKGSAWE 678
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: A0A6H5JHZ0_9PHAE (GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ0_9PHAE) HSP 1 Score: 172 bits (435), Expect = 1.800e-47 Identity = 87/95 (91.58%), Postives = 91/95 (95.79%), Query Frame = 1
Query: 1 QNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNINPNELSAL 285
+NK+MLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRE M+LEAQVQGFVARVNSKLGSIDE GPVQFFLN+NP EL AL
Sbjct: 306 RNKSMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSREHMLLEAQVQGFVARVNSKLGSIDEVGPVQFFLNVNP-ELKAL 399
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: A0A6A3MPS8_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MPS8_9STRA) HSP 1 Score: 164 bits (415), Expect = 3.080e-42 Identity = 95/181 (52.49%), Postives = 122/181 (67.40%), Query Frame = 1
Query: 7 KTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFF-LNINPNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIR-QSFMYS 543
K ++LGVD LD T+GLV K LAVEE+F +P LA +V F+Q+ TG E LE+QV+ V+R+NSKL I GPVQ+ I L ALYA+AD LVITP+RDGM+ +PF YVV RE A V+LSEFAGCA+S+GGA L+NPWNT E TE + A+ ++N+ +R MYS
Sbjct: 353 KQVILGVDQLDQTKGLVHKLLAVEELFTQKPELAKEVVFLQIV-TGASVLES-ALESQVESLVSRINSKLQDIGTEGPVQYLNKEIAVEALIALYALADALVITPVRDGMNTIPFGYVVCREAASKHARVILSEFAGCAQSLGGARLVNPWNTEELTEALQDAL--QDNDEVMRAHQHMYS 529
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: A0A329SM09_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=13 Tax=Phytophthora TaxID=4783 RepID=A0A329SM09_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.940e-41 Identity = 94/181 (51.93%), Postives = 122/181 (67.40%), Query Frame = 1
Query: 7 KTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFF-LNINPNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIR-QSFMYS 543
K ++LGVD LD T+GLV K LAVEE+F +P LA +V F+Q+ TG E LE+QV+ V+R+NSKL I GPVQ+ I L ALYA+AD LVITP+RDGM+ VPF Y+V RE A V+LSEFAGCA+S+GGA L+NPWNT E TE + ++++N+ +R MYS
Sbjct: 345 KKVILGVDQLDQTKGLVHKLLAVEELFTHKPELAKEVVFLQIV-TGASVYES-ALESQVESLVSRINSKLQDIGTEGPVQYLNKEIAVEALIALYALADALVITPVRDGMNTVPFGYIVCREATDKHARVILSEFAGCAQSLGGARLVNPWNTEELTEAL--QESLQDNDEVMRAHQHMYS 521
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: A0A5D6YBX0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBX0_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.020e-41 Identity = 90/178 (50.56%), Postives = 119/178 (66.85%), Query Frame = 1
Query: 7 KTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTG--PHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFF---LNINPNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIR 525
K +LLGVD+LD TRGLV K LAVEE+F P L+ V F+Q+ TG P + + ++L AQV+ V+R+NS+L +I GPVQ+ ++ L ALYA+A LV TPIRDGM+ +PFEYVV RE R PA VVLSEFAG A S+ GAVL+NPWNT E + + A+ ++ +R
Sbjct: 609 KKVLLGVDALDLTRGLVHKLLAVEELFTQHPALSQDVVFLQIV-TGAPPPTPDALLLGAQVESLVSRINSRLTAIGADGPVQYLNLTKELSQEALVALYALAHALVTTPIRDGMNTIPFEYVVCREARGQPARVVLSEFAGSAHSLSGAVLVNPWNTDEVLDALRAALLESDDANALR 785
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: A0A0W8D9Y2_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D9Y2_PHYNI) HSP 1 Score: 161 bits (407), Expect = 2.070e-41 Identity = 93/182 (51.10%), Postives = 123/182 (67.58%), Query Frame = 1
Query: 4 NKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFF-LNINPNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIR-QSFMYS 543
+K ++LGVD LD T+GLV K LAVEE+F +P LA +V F+Q+ TG E LE+QV+ V+R+NSKL I GPVQ+ I L ALYA+AD LVITP+RDGM+ VPF Y+V RE A V+LSEFAGCA+S+GGA L+NPWNT E T+ + ++++N+ +R MYS
Sbjct: 344 DKKVILGVDQLDQTKGLVHKLLAVEELFTHKPELAKEVVFLQIV-TGASVYES-ALESQVESLVSRINSKLQDIGTEGPVQYLNKEIAVEALIALYALADALVITPVRDGMNTVPFGYIVCREATDKHARVILSEFAGCAQSLGGARLVNPWNTEELTDAL--QESLQDNDEVMRAHQHMYS 521
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Match: K3WI94_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WI94_GLOUD) HSP 1 Score: 161 bits (407), Expect = 3.140e-41 Identity = 88/180 (48.89%), Postives = 118/180 (65.56%), Query Frame = 1
Query: 7 KTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNINPNE-LSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIRQSFMYS 543
K ++LGVD LD T+GLV K LA++E+F + P L+ V F+Q+ TG S L +QV+ V+R+NSKL I GPVQ+ P E L ALYA+AD LVITPIRDG++ +PFEYVV RE A +VLSEF+G A S+GGA L+NPWNT E + ++ ++ ++ QS MYS
Sbjct: 48 KKVILGVDQLDLTKGLVHKLLAIDELFTVHPELSKDVVFLQIA-TGTQSLFESPLGSQVESLVSRINSKLQDIGAEGPVQYLNKDIPQEALIALYALADTLVITPIRDGLNTIPFEYVVCREAHGKHARIVLSEFSGSAHSLGGAALVNPWNTEELVDALLASLQENDDVLRAHQS-MYS 225 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12541.1949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12541.1949.1 >prot_E-fasciculatus_F_contig12541.1949.1 ID=prot_E-fasciculatus_F_contig12541.1949.1|Name=mRNA_E-fasciculatus_F_contig12541.1949.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=267bp MLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERback to top mRNA from alignment at E-fasciculatus_F_contig12541:432..3772+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12541.1949.1 ID=mRNA_E-fasciculatus_F_contig12541.1949.1|Name=mRNA_E-fasciculatus_F_contig12541.1949.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3341bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12541:432..3772+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12541:432..3772+ >mRNA_E-fasciculatus_F_contig12541.1949.1 ID=mRNA_E-fasciculatus_F_contig12541.1949.1|Name=mRNA_E-fasciculatus_F_contig12541.1949.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1602bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12541:432..3772+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |