prot_E-fasciculatus_F_contig12522.1941.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12522.1941.1
Unique Nameprot_E-fasciculatus_F_contig12522.1941.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length197
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12522.1941.1 vs. uniprot
Match: D8LCZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ2_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 2.260e-121
Identity = 186/196 (94.90%), Postives = 193/196 (98.47%), Query Frame = 0 
Query:    1 AGACYRAAGEDGKATAMFMQAGDCQCHDSVMAHASAAKDFREAALITERQGRQEEAAAFYMRCAEAWVHADEPGRAAEYFGRSAKLVKDSDEDAAVERYMTASKVMVPNGSDSRSNFTRVVGGVEVLVQAIVFLASANRLEQSMEVVSRYVIILEAEGMEHSLGRMYLTYCVLALALGDYVRADMAFRNVHLQSTA 196
            AGACYRAAGEDGKATAMFMQAGDCQCHDSVMAHASAAKDFREAALITERQGR+EEAAAFYMRCAEAW+HADEPGRAAEYFGRSAKLVKDSDEDAA ER++TASKVMVPNGSDSRSNFTRVVG VEVLVQAI+FLAS NRLEQSMEV+SRYVIILEAEGMEHSLGRMYLTYC+LALALGDYVRADMAFRNVHLQSTA
Sbjct:  101 AGACYRAAGEDGKATAMFMQAGDCQCHDSVMAHASAAKDFREAALITERQGRREEAAAFYMRCAEAWMHADEPGRAAEYFGRSAKLVKDSDEDAAAERFVTASKVMVPNGSDSRSNFTRVVGSVEVLVQAIIFLASTNRLEQSMEVLSRYVIILEAEGMEHSLGRMYLTYCILALALGDYVRADMAFRNVHLQSTA 296
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BLAST of mRNA_E-fasciculatus_F_contig12522.1941.1 vs. uniprot
Match: A0A836CBL3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 6.530e-35
Identity = 79/196 (40.31%), Postives = 118/196 (60.20%), Query Frame = 0 
Query:    1 AGACYRAAGEDGKATAMFMQAGDCQCHDSVMAHASAAKDFREAALITERQGRQEEAAAFYMRCAEAWVHADEPGRAAEYFGRSAKLVKDSDEDAAVERYMTASKVMVPNGSDS-RSNFTRVVGGVEVLVQAIVFLASANRLEQSMEVVSRYVIILEAEGMEHSLGRMYLTYCVLALALGDYVRADMAFRNVHLQST 195
            A A YRA G++  A   + QAG+CQ  D   A   AA+D+REAA +        +A   +   A +W++  EPG+A EY G++A++++  DED A E Y  A+  M+P G +   ++F ++VG  E L  A+ FL  A RL+ ++ V+ RY I LE+E   H+L R++LT  V+ LA GDYV AD A+R+ HLQ +
Sbjct:  111 AAAAYRACGQEEAALMAYAQAGECQ--DENAAWPLAARDYREAAQLALTCRADAKAVEMFKAAATSWMNGAEPGKAGEYLGKAAQVLEGIDEDRAAEEYKAAADAMIPEGVNPYTTDFIKIVGARETLDAALRFLLGARRLDDALHVLRRYCIFLESERATHTLHRLFLTEAVVLLARGDYVAADAAYRDAHLQDS 304
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12522.1941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCZ2_ECTSI2.260e-12194.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBL3_9STRA6.530e-3540.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14938SNAPcoord: 1..190
e-value: 3.7E-9
score: 36.4
NoneNo IPR availablePANTHERPTHR13768:SF2GAMMA-SOLUBLE NSF ATTACHMENT PROTEINcoord: 1..191
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..195
e-value: 1.8E-19
score: 71.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..189
IPR000744NSF attachment proteinPANTHERPTHR13768SOLUBLE NSF ATTACHMENT PROTEIN SNAPcoord: 1..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12522contigE-fasciculatus_F_contig12522:36..3371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12522.1941.1mRNA_E-fasciculatus_F_contig12522.1941.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12522 36..3371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12522.1941.1 ID=prot_E-fasciculatus_F_contig12522.1941.1|Name=mRNA_E-fasciculatus_F_contig12522.1941.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=197bp
AGACYRAAGEDGKATAMFMQAGDCQCHDSVMAHASAAKDFREAALITERQ
GRQEEAAAFYMRCAEAWVHADEPGRAAEYFGRSAKLVKDSDEDAAVERYM
TASKVMVPNGSDSRSNFTRVVGGVEVLVQAIVFLASANRLEQSMEVVSRY
VIILEAEGMEHSLGRMYLTYCVLALALGDYVRADMAFRNVHLQSTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000744NSF_attach
IPR011990TPR-like_helical_dom_sf