prot_E-fasciculatus_F_contig1250.1924.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1250.1924.1
Unique Nameprot_E-fasciculatus_F_contig1250.1924.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length322
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1250.1924.1 vs. uniprot
Match: D7FXR5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR5_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 6.520e-15
Identity = 49/84 (58.33%), Postives = 56/84 (66.67%), Query Frame = 0 
Query:    5 EVSALIGVVTVMAMLHVFSSPARNDTGTVADSFKEPYAATSVGSTKRRCIRLFGRVVFVLVMFGTYVGLESVIRWTSPDSKVKP 88
            +V+AL+GV+T MA L VFSSPAR DTG VA SFKE        S K R IRLF RV FV V+F T+ GLESVIR +S     KP
Sbjct:    5 KVAALVGVMTAMAGLLVFSSPARCDTGIVAASFKELDDGEKSRSAKHRWIRLFVRVFFVYVVFATFAGLESVIRRSSMVFTAKP 88
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1250.1924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXR5_ECTSI6.520e-1558.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..249
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 23..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..321
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 56..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1250contigE-fasciculatus_F_contig1250:9171..14048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1250.1924.1mRNA_E-fasciculatus_F_contig1250.1924.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1250 9171..14687 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1250.1924.1 ID=prot_E-fasciculatus_F_contig1250.1924.1|Name=mRNA_E-fasciculatus_F_contig1250.1924.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=322bp
MPGSEVSALIGVVTVMAMLHVFSSPARNDTGTVADSFKEPYAATSVGSTK
RRCIRLFGRVVFVLVMFGTYVGLESVIRWTSPDSKVKPPVEEGGHNDVLD
ERGEKEKREAAAEEARRRIEKEKKEAAAEEARRRVENEKREAAAAEERRR
IEKEKREAAAEEERRRIEKEKKEAAAEEARRRVEKEKREAAAEEERRRVE
KEKREAAAEEERRRIENEKKEAAAEEAKRRKQRENYDTYRKRAEEKQRVK
IEKEQRESPEEMRRRKVDEYYESRKRSAADEGTPRIEKEERESPEEMRRR
KMGEYYEARKRNAAGKASAKA*
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