mRNA_E-fasciculatus_F_contig12482.1911.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12482.1911.1
Unique NamemRNA_E-fasciculatus_F_contig12482.1911.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: D7FZY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY0_ECTSI)

HSP 1 Score: 466 bits (1198), Expect = 2.540e-161
Identity = 233/248 (93.95%), Postives = 238/248 (95.97%), Query Frame = 1
Query:    1 ICSSLNRNDIAGWCDSPGALATWNIFRRGFADEEDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGADSGRDGTSARRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLATLSKGGSADQSKSMRWSSEADEALSRVPTKHQREVVRDVEKAAKANRGAEVCL 744
            + +S  RNDIAGWCDSPGALATWNIFRRGFADE DHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPR+D+YRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGAD GRDGT ARRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLAT SKG +ADQSKSMRWSSEADE LSRVPTKHQREVVRDVEKAAKANRGAEV L
Sbjct:   71 VAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDEYRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGADGGRDGTRARRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLATSSKG-TADQSKSMRWSSEADETLSRVPTKHQREVVRDVEKAAKANRGAEVDL 317          
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: A0A835ZBI6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBI6_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.130e-56
Identity = 113/266 (42.48%), Postives = 159/266 (59.77%), Query Frame = 1
Query:    1 ICSSLNRNDIAGWCDSPGALATWNIFRRGFADEEDHA--PDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRE--DDYRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGADSGRDGTSA----------RRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLATLS----KGGSADQSKSMRWSSEADEALSRVPTKHQREVVRDVEKAAKANRGAEVCL 744
            + +S  R ++AGWC+ PGALA WN F+R  + +E     PD + DHSS LMC+ CHP  PAI+AAGSFNGEV+VW+T+ D+PLL  ++IDD +HREPVT ++WV++  E  + YRL + SGDGK+L WSL+N L  PVEGY +    A + R   S             SSA         LSF  EG+ ++S VVG+E GA+VKC L   S    K  +A     ++W ++A   L + P   Q +  + VE+ A+++  + V L
Sbjct:   75 LAASYGRLNVAGWCNEPGALACWNAFKRSSSADEAATLTPDVVFDHSSYLMCLCCHPTHPAIVAAGSFNGEVLVWNTAADDPLLGVSQIDDYFHREPVTQVAWVYDMDEQGEGYRLVSTSGDGKILCWSLRNRLAYPVEGYALLTAPAGNRRVLISKLVERPLLTIPMSSSA---------LSFFSEGKLVSSLVVGSEAGALVKCTLPVTSSANLKESTAAAGGMLQWDADAARLLQKAPRSRQHQFCQRVERHAQSHGQSHVTL 331          
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: A0A7S2UTZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTZ9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.210e-55
Identity = 78/138 (56.52%), Postives = 110/138 (79.71%), Query Frame = 1
Query:    1 ICSSLNRNDIAGWCDSPGALATWNIF-RRGFADEEDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGY 411
            + +S  R+D+ GWCD PG L  WNIF RRGF   +   P+ + +HSSCLMCV+CHP  PAIIAAGSFNGEV+VWDT+ +EPL+A+TKIDD +HREP+  ++WV++ RE++Y++++VSG+GK+L+WSLK  L+ P +G+
Sbjct:   34 LVASFGRHDLCGWCDIPGVLCAWNIFQRRGF---DPAKPEFVYEHSSCLMCVACHPTKPAIIAAGSFNGEVLVWDTAAEEPLIASTKIDDYFHREPIVKVAWVYDLREEEYQVSSVSGEGKVLWWSLKTGLKNPSKGF 168          
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: A0A7S1CG11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CG11_9STRA)

HSP 1 Score: 192 bits (487), Expect = 2.820e-54
Identity = 107/244 (43.85%), Postives = 144/244 (59.02%), Query Frame = 1
Query:    1 ICSSLNRNDIAGWCDSPGALATWNIFRRGFADEEDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGADSGRDGTSARRSS-ARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLATLSKGGSADQSKS----MRWSSEADEALSRVPTKHQREVVRDVEKAAK 717
            +C+S    D +GWC     + TWN+F +G        PD +LD  SC+MCV+CHP  P+++AAG+FNGEVVVWDT+  EPL+A ++IDD +HREPVT + W+++     Y LA+VS DGK+LFW+L N L  PV+G+R+    A   R    ARR         G T L+F R+GR   S VVG+EGG V KC +   +   SA    +    M W  EA  AL RVP   + EV R  E+ A+
Sbjct:  171 VCASFGFQDHSGWCTHRAGVGTWNVFGKGL---RAGTPDVLLDTMSCVMCVACHPERPSVVAAGTFNGEVVVWDTNEAEPLVAQSRIDDYFHREPVTRVEWLYDMFARAYMLASVSADGKVLFWTLANKLAYPVQGFRL----APGRRHRPRARRERPGASDVVGGTALAFARDGRVTNSFVVGSEGGGVFKCLIRNQAPPASAAAGLTGVAEMPWDDEAAVALLRVPQADRFEVARHTERYAR 407          
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: G4Z490_PHYSP (WD-40 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z490_PHYSP)

HSP 1 Score: 172 bits (436), Expect = 1.400e-46
Identity = 99/248 (39.92%), Postives = 140/248 (56.45%), Query Frame = 1
Query:    1 ICSSLNRNDIAGWCDSPGALATWNIFRRGFADEEDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGADSGRDGTSARRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLATLSKGGSADQSKSMRWSSEADEALSRVPTKHQREVVRDVEKAAKANRGAEVCL 744
            I  +  R D +GWC+   AL  WN+F+   +D     P  +L+ SS LMCV+ HP SP+I+AAGSFNGEV VWDT   +    ++ I D +HREPVT ++WV++ + +DY +A+VSGDGK+LFW +K+ L  PVEGY +   GA+ G+      RS   G  A    L+F    +   + VVG+EGG V +C     S   S+D     +W++ A   + ++P        R VE  A A R  EV L
Sbjct:  165 IAVAYGRFDHSGWCNYRSALCLWNVFQ---SDLNPQKPSLVLETSSGLMCVAFHPQSPSIVAAGSFNGEVFVWDTEPVDYRFFSSGIGDYFHREPVTKVAWVYDIQTNDYNVASVSGDGKILFWRVKDKLAFPVEGYVMHLPGANGGKSNNDETRSPVIGGKA----LAFSSIDKASRAFVVGSEGGVVARCFAKAASNVRSSDFKGEKKWTATAARLVMKLPASKVPAARRQVEAYASAKRSKEVTL 405          
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: A0A2P4Y6Q8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y6Q8_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.110e-44
Identity = 95/248 (38.31%), Postives = 135/248 (54.44%), Query Frame = 1
Query:    1 ICSSLNRNDIAGWCDSPGALATWNIFRRGFADEEDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGADSGRDGTSARRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLATLSKGGSADQSKSMRWSSEADEALSRVPTKHQREVVRDVEKAAKANRGAEVCL 744
            I  +  R D +GWC+   AL  WN+F+   +D     P  +L+ SS LMCV+ HP +P+I+AAGSFNGEV VWD    +    ++ I D +HREPVT ++WV++ +  DY +A+VSGDGK+LFW +K+ L  PVEGY +       G     +    AR    G   L+F    +   + VVG+EGG V +C     S   S+D     +W++ A   +S++PT       R VE  A   R  EV L
Sbjct:  162 IAVAYGRFDHSGWCNYRSALCLWNVFQ---SDLNPQKPSLVLETSSGLMCVAFHPQNPSIVAAGSFNGEVFVWDLEPVDYKFLSSGIGDYFHREPVTKVAWVYDIQTADYNIASVSGDGKILFWRVKDKLAFPVEGYVMHLPQGVGGSTSGKSNSDEARSPVIGGKALAFSSTDKASRAFVVGSEGGVVARCFAKAASNVRSSDFKGEKKWTATAARLVSKLPTSKIPAARRQVEAYASTKRSKEVTL 406          
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: H3GUI5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUI5_PHYRM)

HSP 1 Score: 166 bits (420), Expect = 3.970e-44
Identity = 99/250 (39.60%), Postives = 140/250 (56.00%), Query Frame = 1
Query:    1 ICSSLNRNDIAGWCDSPGALATWNIFRRGFADEEDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGY--RVPAEGADSGRDGTSARRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLATLSKGGSADQSKSMRWSSEADEALSRVPTKHQREVVRDVEKAAKANRGAEVCL 744
            I  +  R D +GWC+   AL  WN+F+   +D     P  +L+ SS LMCV+ HP +P+I AAGSFNGEV VWDT   +    ++ I D +HREPVT ++WV++ +  DY +A+VSGDGK+LFW +K+ L  PVEGY   +P +G   G+  +   R+   G  A    L+F    R   + VVG+EGG V +C         S+D     +W++ A   +S++PT       R VE  A A R  EV L
Sbjct:  164 IAVAYGRFDHSGWCNYRSALCLWNVFQ---SDLNPQKPSLVLETSSGLMCVAFHPQNPSIFAAGSFNGEVFVWDTEPADYRFYSSGIGDYFHREPVTKVAWVYDIQTADYNVASVSGDGKILFWRVKDKLAFPVEGYVMHLP-QGLGGGKGNSDETRTPVIGGKA----LAFSSIDRASRAFVVGSEGGVVARCFAKAAGNVRSSDFKGEKKWTATAARLVSKLPTSRIPAARRQVEACASAKRSKEVTL 405          
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: A0A5D6Y6F8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6F8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 5.350e-44
Identity = 100/257 (38.91%), Postives = 149/257 (57.98%), Query Frame = 1
Query:    1 ICSSLNRNDIAGWCDSPGALATWNIFRRGFADEEDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGY--RVPA--EGADSGRDGT-----SARRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLATLSKGGSADQSKSMRWSSEADEALSRVPTKHQREVVRDVEKAAKANRGAEVCL 744
            I  +  R D +GWC+   AL  W++F+  F   +   P+ +L+ SS LMCV+ HP +P+++AAGSFNGEV VWDT  DE    ++ I D +HREPVTS++WV++ +  +Y +A+VSGDGK+LFW LK+ L  PVEGY   +PA  +G  S          +   ++ARG   G  TL F    +   S VVG+EGGAV +C    +++  +AD     +W++ A   + ++P      V R VE+ A   +  E+ L
Sbjct:  175 IAIAYGRFDHSGWCNYRSALCLWSVFQSDFNPLK---PNLVLETSSGLMCVAYHPKNPSVVAAGSFNGEVFVWDTEPDEYRFYSSGIGDYFHREPVTSVAWVYDVQAAEYNVASVSGDGKVLFWRLKDKLAYPVEGYVMHLPANTKGGSSXXXXXXXXXXAVTPNAARGHVIGGKTLGFSAGDKTSRSFVVGSEGGAVTRCFSKGVTR--AADFKGDKKWTATAARLVGKLPAPRLPAVRRQVEQHATERKAKEITL 426          
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: A0A1W0AAK0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAK0_9STRA)

HSP 1 Score: 164 bits (416), Expect = 8.180e-44
Identity = 93/226 (41.15%), Postives = 129/226 (57.08%), Query Frame = 1
Query:    1 ICSSLNRNDIAGWCDSPGALATWNIFRRGFADEEDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGADSGRDGTSARRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKC---RLATLSKGGSADQSKSMRWSSEADEALSRVP 669
            I  S  R D  GWC+   AL  WNIF   F   +   P+ +L+ SS LMCV+ HP  PA++AAG+FNGEV+VW+TS +E L+A++ I D +HREP++ LSWV++    DY +A+VSGDGK+L W LK+ L  PVEGY +           T A+  +      G   L+F    R   S +VGTE GA+ +C   + A +S  G       ++WS+ A   LS  P
Sbjct:  152 IAVSYGRFDHTGWCNYRSALCLWNIFHHDFNPSK---PNLVLETSSGLMCVAHHPTMPAVVAAGTFNGEVIVWNTSLEENLVASSGIGDYFHREPISKLSWVYDATSRDYNIASVSGDGKVLIWQLKDKLGFPVEGYLLC----------TKAKTKTKGSLLLGGIALAFRPNDRTNKSFIVGTEAGAITRCFANKAAKISTKGE------IKWSNNAQRILSMSP 358          
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Match: A0A7S2GHC5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHC5_9STRA)

HSP 1 Score: 164 bits (414), Expect = 8.790e-44
Identity = 82/202 (40.59%), Postives = 124/202 (61.39%), Query Frame = 1
Query:   13 LNRNDIAGWCDSPGALATWNIFRRGFADEEDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGYRV----PAEGADSGRDGTSARRSSA---RGRTAGCTTLSFLREGRH-------MTSAVVGTEGGAVVKC 576
              R D++GWC  PG LA W++FRR F  E+   P+T++DHSSCLM ++CHP  P+I+A GSFNGEV+++D +  EPL+  ++IDD +HREPV  L W+++  + D+ L++VS DGK+LFWSL++ L  PV G ++    P    +  +   +   SSA    G   G T ++F+            M+  +VGTE G ++ C
Sbjct:   42 FGRIDMSGWCTLPGVLAAWSLFRRDFDHEKP--PETVIDHSSCLMSLACHPTKPSIVAVGSFNGEVILYDLTNPEPLVHASQIDDYFHREPVAQLRWIYDVEQQDHVLSSVSSDGKVLFWSLRHALTYPVFGTKLSLHKPVTANNETQSAATTSISSALRHSGSVHGGTAVAFIGSSAESKDCTVQMSPMIVGTEAGGLLGC 241          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12482.1911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZY0_ECTSI2.540e-16193.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZBI6_9STRA1.130e-5642.48WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2UTZ9_9STRA2.210e-5556.52Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1CG11_9STRA2.820e-5443.85Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
G4Z490_PHYSP1.400e-4639.92WD-40 domain-containing protein n=5 Tax=Phytophtho... [more]
A0A2P4Y6Q8_9STRA2.110e-4438.31Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
H3GUI5_PHYRM3.970e-4439.60Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6Y6F8_9STRA5.350e-4438.91Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1W0AAK0_9STRA8.180e-4441.15Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2GHC5_9STRA8.790e-4440.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12482contigE-fasciculatus_F_contig12482:600..3914 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score469.9
Seed ortholog evalue7.2e-130
Seed eggNOG ortholog2880.D7FZY0
Preferred nameWDR34
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005868,GO:0005875,GO:0005929,GO:0005930,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0030705,GO:0031503,GO:0032838,GO:0032991,GO:0035735,GO:0036064,GO:0042073,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044782,GO:0045503,GO:0045504,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060271,GO:0070925,GO:0071840,GO:0097014,GO:0097542,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG1587@1,KOG1587@2759
Ec32 orthologEc-22_003670.3
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-22_003670.1
Exons7
Model size744
Cds size744
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927755.1801822-CDS-E-fasciculatus_F_contig12482:599..7461622927755.1801822-CDS-E-fasciculatus_F_contig12482:599..746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 600..746 -
1695995680.744823-CDS-E-fasciculatus_F_contig12482:599..7461695995680.744823-CDS-E-fasciculatus_F_contig12482:599..746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 600..746 -
1622927755.1942425-CDS-E-fasciculatus_F_contig12482:1361..14721622927755.1942425-CDS-E-fasciculatus_F_contig12482:1361..1472Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 1362..1472 -
1695995680.7634008-CDS-E-fasciculatus_F_contig12482:1361..14721695995680.7634008-CDS-E-fasciculatus_F_contig12482:1361..1472Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 1362..1472 -
1622927755.203597-CDS-E-fasciculatus_F_contig12482:1844..19701622927755.203597-CDS-E-fasciculatus_F_contig12482:1844..1970Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 1845..1970 -
1695995680.7728841-CDS-E-fasciculatus_F_contig12482:1844..19701695995680.7728841-CDS-E-fasciculatus_F_contig12482:1844..1970Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 1845..1970 -
1622927755.2132688-CDS-E-fasciculatus_F_contig12482:2354..24201622927755.2132688-CDS-E-fasciculatus_F_contig12482:2354..2420Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 2355..2420 -
1695995680.801769-CDS-E-fasciculatus_F_contig12482:2354..24201695995680.801769-CDS-E-fasciculatus_F_contig12482:2354..2420Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 2355..2420 -
1622927755.2226477-CDS-E-fasciculatus_F_contig12482:2773..28601622927755.2226477-CDS-E-fasciculatus_F_contig12482:2773..2860Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 2774..2860 -
1695995680.810712-CDS-E-fasciculatus_F_contig12482:2773..28601695995680.810712-CDS-E-fasciculatus_F_contig12482:2773..2860Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 2774..2860 -
1622927755.2329295-CDS-E-fasciculatus_F_contig12482:3085..31551622927755.2329295-CDS-E-fasciculatus_F_contig12482:3085..3155Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 3086..3155 -
1695995680.8191342-CDS-E-fasciculatus_F_contig12482:3085..31551695995680.8191342-CDS-E-fasciculatus_F_contig12482:3085..3155Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 3086..3155 -
1622927755.2448993-CDS-E-fasciculatus_F_contig12482:3777..39141622927755.2448993-CDS-E-fasciculatus_F_contig12482:3777..3914Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 3778..3914 -
1695995680.827129-CDS-E-fasciculatus_F_contig12482:3777..39141695995680.827129-CDS-E-fasciculatus_F_contig12482:3777..3914Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12482 3778..3914 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12482.1911.1prot_E-fasciculatus_F_contig12482.1911.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12482 600..3914 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12482.1911.1

>prot_E-fasciculatus_F_contig12482.1911.1 ID=prot_E-fasciculatus_F_contig12482.1911.1|Name=mRNA_E-fasciculatus_F_contig12482.1911.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=248bp
ICSSLNRNDIAGWCDSPGALATWNIFRRGFADEEDHAPDTILDHSSCLMC
VSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLS
WVHNPREDDYRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGADSGRDG
TSARRSSARGRTAGCTTLSFLREGRHMTSAVVGTEGGAVVKCRLATLSKG
GSADQSKSMRWSSEADEALSRVPTKHQREVVRDVEKAAKANRGAEVCL
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mRNA from alignment at E-fasciculatus_F_contig12482:600..3914-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12482.1911.1 ID=mRNA_E-fasciculatus_F_contig12482.1911.1|Name=mRNA_E-fasciculatus_F_contig12482.1911.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3315bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12482:600..3914- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATTTGTTCTTCTTTGAACAGAAACGACATCGCCGGCTGGTGCGACTCCCC AGGGGCTCTCGCCACCTGGAACATATTCCGCCGAGGCTTTGCCGACGAGG AGGACCACGCGCCTGATACCATTCTGGACCACAGCAGGTGCGAAGCAGGG GGCGAGGGTGGCGAGACTGTCAGCGGGAGCTCTACAGCGACTGAAGGAGA TACACTTGTTGTTTGCCTGATAGCGGGTTAGGGTTGGGCGATGAAAACAG AACGTTGCAAGGAAGTTGGCTGTGTGGTAATGCGCATGTGTGCAAAGCTC AGTATTGTTTCATTCCTTGACAATCGAGGAGCCACAGCAGTATCCCATTT GCACCGGGTGATGCGATGGTTTACATGCTCCATATGTGGGTTGCCCCCAT GGCCTTCAGGCGCCCTCGAAGTGTACCTGGATGTAATCGAGGTCAGTAAT TCGAGTTCAACTGTTTTTGAAACCGCTGATGTGGATATTTCGAGGTTTGA CTTTGATACCAACGCGAGAAAAGATTCCCGACTCTCTTAATCGACGTTTC AGACATGCACCATGAAATGAAACCTTCAAGTGGTAGTCCGGCTGACGCGG CTGTGGGTCGAACGTGTATGTACACATTTACACTAAATAGGAGATCAAAG AAGTAGGGACGGACACAGGAAAAAAACGTTCGTATAAGGTATGCGCATTG TGCAAGAGCCAATGTTGTTAGCCCTGACCTGGTCTTCCCGCATAACTTTC CCCGCCCAGCTGTTTGATGTGCGTCAGCTGCCACCCACTGAGCCCAGCGA TCATAGCCGCGGGATCCTTCAATGGCGAGGTAAGCACTGCCATTGTTGCT AAAAACGCCACGCCCAAATCACACAGCTCATAGGCAGTGAAAAGGCCACC GCATCAACATGTGATATCTCGTCGACTTCACCATAGGGTAACCTTCACCC TTCGGCCACCCGATTGAACAGCTGCAAGAGAGAGACACCGAACGTTTACC AATACCATCTGGCGGGACCATGCCGGGGGGGGCGTGCTTCCTCGCCTGTT GCAGGTGGTGGTGTGGGACACGTCGAGGGATGAACCGCTGCTGGCAACGA CCAAGATCGACGACCTCTACCACCGAGAGCCGGTGACGTCGGTAAGAGGA GGAGACGAAACGTAGCAATGCGCCTTGCGCAACGAGTGTGCGTGGTGGGA AGTCGGAAATCCATGCCTCAGGGTGCAAGCAGTGATGCTAGAGTTGAACA CAACCGGCGATGTTGTATGCGTGAACAATTATTACTATCAACGGGTGGGT AGTCTTCGACAGTGGATTGGGCAGAAAAAGGTGGTATGCGGTGTAACAGC TGTAGAGGTTACCCCGACACAACACACATTTCAATGTCCACATCAATGAT GCCAAGAGCACCAGCACCAACCATGTAGTTACCCAACTTACATGCCACGC TTCGACGTTGTCTCTGCTTTTCTTCTCTCTCTCTCTCCCCCCAGCTATCC TGGGTGCACAACCCGCGAGAGGACGACTACCGCCTGGCCGCTGTGTCCGG GGATGGAAAGGTGAGGCCACAAAATCTTGGAGAAAAACCACAGCGAGACC TCTTGCTGTGTTTTCAGCTGCTACATGGGCACCTTAATGACCAAGTACCT TTGCCCTTCACGGTAGGAACAGCCCGCGAGACTTGAATGTGTCAACACAA GCCAGACAGTATCATCCTCTCTCTTCGTGTGGCCCAAGCTAACCCAGAGC CATACGCAGCGTAAGCAGGCTGCCGCCTGATTTATCCCTTACAACGTTTC GTCCACTTGTTATGGTGGGAACACTTCGGAAGGTTTCTTCGAAAACCATA ACCGAGGATTAACTCGCACCTACGAATCCCCAAGGAAAAACTCCTGTCTC ATCTGCAGTCCCCCCATTGCTGTTGTCTTTCGGATGTGTTTCAGCTTCTG TTTTGGTCTCTGAAGAACAACCTCCAATGCCCGGTAGAAGGATACCGAGT GCCAGCGGAGGGGGCGGACAGTGGCCGGGATGGCACCAGCGCTCGAAGGT CTTCCGCCAGAGGCCGCACAGTGAGCAAAACTTTCACTGCTCCAAAAAAA ACTTTTATTGTGTGGAACGGTCAATAGAACTCATACGCCGCCGATCTTCC CATTGCCAAAGGCAATCGCATCGACATGTGTGGCTCGGCGGATGGGTTCT TGCACATTGGAACAGGTCGGATACATGAGGCGGTACTGCTGGGCGCCCTA GCTCTGGGTAGCATAACACAAGGCTACGTTTTTTTGTAAGGCGTCCACCG TAGGCATGTATGGGCCATAATATATAGAGAACGACAGTAATCCCATGCTT GTTCAGTCTCGCGATAAACGTCAGTTTGTGCGGTTGCTACTGCTCCACGA CAACAAACTGTAACTGCTCTATTTTTCGCCCTCCTCGACAAGGCGGGATG CACCACGCTGTCGTTCTTGCGGGAGGGACGCCACATGACCTCGGCCGTAG TCGGGACGGAGGGAGGGGCCGTCGTGAAGTGCCGGTTGGCGACATTGTCC AAGGTGGGACCCAAGCGCGACGGGAATGCTTTGGGGCGGCGGTTGTTGCA CGTGGTTTGACCCTCCGTCGTGAACTAATTTGGCGGCGTTTGTCGACAGT GTCGACAGTCGATGGTGTGGTATGCCCATGCCGTTTTCGCCTGGAGCTCT CGGCGGCAGATACGGTCTGGGGCGTAGTGCCTGATCATAACTTGATGGCT TTTTCTTTCCAGGCGGTGTAGGTGGTATGTGTCTTGCATGCGTGGAAAGA ACTGCGTCTTGTGCGAACAGGGTCTAACACGCAAGCTCGAATAAGAAGAC ACTTCGCCTGGTGTTCCGCAGCGAAGCGTAAACGGTACACGCTTGCCCAA GGGAGAGGATCTGTGTTTTCTAACACTTACCTTGTGCGACCGCAAACGTT GTTGGTGCATTCACAAAGGTACCCGCGTACGACCCTAAATACTCACGTGA CATGACGATAAAACCCGGAACGTCTGTGAATATCCATGTGTGATTCCGTG TGGTGATGGAGGAAAACTGTTGGTGCCGATAGGCGGACCAAACCAACGAC CAACGGCCTTGAGAGTTAACACATCTGGCATGGTTTTCCACCCGCCGACT TGGTCGTCGGAAACACAGGGCGGGTCTGCAGATCAGAGCAAGAGCATGCG GTGGTCATCGGAAGCGGACGAGGCACTGAGCCGGGTCCCGACCAAGCATC AGCGGGAGGTGGTCAGGGATGTCGAGAAGGCGGCGAAAGCCAACCGCGGG GCAGAGGTGTGTCTC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12482:600..3914-

>mRNA_E-fasciculatus_F_contig12482.1911.1 ID=mRNA_E-fasciculatus_F_contig12482.1911.1|Name=mRNA_E-fasciculatus_F_contig12482.1911.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1488bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12482:600..3914- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATTTGTTCTTCTTTGAACAGAAACGACATCGCCGGCTGGTGCGACTCCCC
AGGGGCTCTCGCCACCTGGAACATATTCCGCCGAGGCTTTGCCGACGAGG
AGGACCACGCGCCTGATACCATTCTGGACCACAGCAGATTTGTTCTTCTT
TGAACAGAAACGACATCGCCGGCTGGTGCGACTCCCCAGGGGCTCTCGCC
ACCTGGAACATATTCCGCCGAGGCTTTGCCGACGAGGAGGACCACGCGCC
TGATACCATTCTGGACCACAGCAGCTGTTTGATGTGCGTCAGCTGCCACC
CACTGAGCCCAGCGATCATAGCCGCGGGATCCTTCAATGGCGAGCTGTTT
GATGTGCGTCAGCTGCCACCCACTGAGCCCAGCGATCATAGCCGCGGGAT
CCTTCAATGGCGAGGTGGTGGTGTGGGACACGTCGAGGGATGAACCGCTG
CTGGCAACGACCAAGATCGACGACCTCTACCACCGAGAGCCGGTGACGTC
GGTGGTGGTGTGGGACACGTCGAGGGATGAACCGCTGCTGGCAACGACCA
AGATCGACGACCTCTACCACCGAGAGCCGGTGACGTCGCTATCCTGGGTG
CACAACCCGCGAGAGGACGACTACCGCCTGGCCGCTGTGTCCGGGGATGG
AAAGCTATCCTGGGTGCACAACCCGCGAGAGGACGACTACCGCCTGGCCG
CTGTGTCCGGGGATGGAAAGCTTCTGTTTTGGTCTCTGAAGAACAACCTC
CAATGCCCGGTAGAAGGATACCGAGTGCCAGCGGAGGGGGCGGACAGTGG
CCGGGATGGCACCAGCGCTCGAAGGTCTTCCGCCAGAGGCCGCACACTTC
TGTTTTGGTCTCTGAAGAACAACCTCCAATGCCCGGTAGAAGGATACCGA
GTGCCAGCGGAGGGGGCGGACAGTGGCCGGGATGGCACCAGCGCTCGAAG
GTCTTCCGCCAGAGGCCGCACAGCGGGATGCACCACGCTGTCGTTCTTGC
GGGAGGGACGCCACATGACCTCGGCCGTAGTCGGGACGGAGGGAGGGGCC
GTCGTGAAGTGCCGGTTGGCGACATTGTCCAAGGCGGGATGCACCACGCT
GTCGTTCTTGCGGGAGGGACGCCACATGACCTCGGCCGTAGTCGGGACGG
AGGGAGGGGCCGTCGTGAAGTGCCGGTTGGCGACATTGTCCAAGGGCGGG
TCTGCAGATCAGAGCAAGAGCATGCGGTGGTCATCGGAAGCGGACGAGGC
ACTGAGCCGGGTCCCGACCAAGCATCAGCGGGAGGTGGTCAGGGATGTCG
AGAAGGCGGCGAAAGCCAACCGCGGGGCAGAGGTGTGTCTCGGCGGGTCT
GCAGATCAGAGCAAGAGCATGCGGTGGTCATCGGAAGCGGACGAGGCACT
GAGCCGGGTCCCGACCAAGCATCAGCGGGAGGTGGTCAGGGATGTCGAGA
AGGCGGCGAAAGCCAACCGCGGGGCAGAGGTGTGTCTC
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