prot_E-fasciculatus_F_contig1248.1908.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1248.1908.1
Unique Nameprot_E-fasciculatus_F_contig1248.1908.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length167
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1248.1908.1 vs. uniprot
Match: D8LRN9_ECTSI (Rubredoxin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN9_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 2.470e-90
Identity = 147/163 (90.18%), Postives = 161/163 (98.77%), Query Frame = 0 
Query:    1 MARGMMRRQAAVGVVALALAGGGNTASAFVLGPSKGGLRSKAPRTPAVRPLQMAGGGPRGRSGGAPVRIEGADGSRVVVASAMPIEGISQQRPISMDGDGYDESEMVEGAMGAAAGLQQEDYQGFTGGQQRRTNQMVDPNSREATLTRKNKLLFGGLVVATVT 163
            MARGMMRRQAAVGVVALAL+GGG++ASAFVLGPSKGGLRSKAPRTPAVRPLQMAGGGPRGRSGGAPVRIEGADGSRVVVASAMP++GI QQ+ +S+DGDGYD+SEMVEGA+GAA+G+QQEDYQGFTGGQ+RRTNQ+VDPNSREATLTRKNKLLFGGLVVATVT
Sbjct:    1 MARGMMRRQAAVGVVALALSGGGSSASAFVLGPSKGGLRSKAPRTPAVRPLQMAGGGPRGRSGGAPVRIEGADGSRVVVASAMPVQGIPQQQSMSVDGDGYDDSEMVEGAIGAASGMQQEDYQGFTGGQERRTNQVVDPNSREATLTRKNKLLFGGLVVATVT 163
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1248.1908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRN9_ECTSI2.470e-9090.18Rubredoxin-like domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1248contigE-fasciculatus_F_contig1248:14063..16931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1248.1908.1mRNA_E-fasciculatus_F_contig1248.1908.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1248 14063..16931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1248.1908.1 ID=prot_E-fasciculatus_F_contig1248.1908.1|Name=mRNA_E-fasciculatus_F_contig1248.1908.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=167bp
MARGMMRRQAAVGVVALALAGGGNTASAFVLGPSKGGLRSKAPRTPAVRP
LQMAGGGPRGRSGGAPVRIEGADGSRVVVASAMPIEGISQQRPISMDGDG
YDESEMVEGAMGAAAGLQQEDYQGFTGGQQRRTNQMVDPNSREATLTRKN
KLLFGGLVVATVTGKG*
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