prot_E-fasciculatus_F_contig12475.1903.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12475.1903.1
Unique Nameprot_E-fasciculatus_F_contig12475.1903.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length296
Homology
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: D7FNH6_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH6_ECTSI)

HSP 1 Score: 473 bits (1217), Expect = 1.530e-162
Identity = 252/295 (85.42%), Postives = 267/295 (90.51%), Query Frame = 0
Query:    1 MQLAVVLSCFSLSLNVFSVYYNYFDFRYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSVGRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSLGVSTRIEKALGFLLPGLPLFCASGCGVVGLAVAWYALRKAGEPGAADPKATTNPSDVDAEEGGVMASPTVDTADSSTAPPAENSSVGSDGGDCGHPGKETPAANPAVLMRPASRATGLGDDEDTMSDMSEPLLPRGDRFDSRSSS 295
            MQLAVVL+CFSLSLNVFSVYYNYFDFRYHWSPL+ISL+FSTFGILLALTSGL IRFLVPKRLSVGRGVLLGLALQSSST LFGLAS+GWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQ + VQCLRNVSQGLAGV+YGQIFSLGVSTR+E ALGF+LPGLPLFCASGCG   L +AWYALRKAGE GAADPK+T NPSDV+AEE G+MAS TVD  DSSTA PAE+SS     GD G  GKE PAANP  LM+PASR TGLGD+EDTMSDMSEPLLPRGDRFDSRSSS
Sbjct:  287 MQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLFFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGA-VQCLRNVSQGLAGVLYGQIFSLGVSTRVENALGFVLPGLPLFCASGCGATALTIAWYALRKAGETGAADPKSTANPSDVEAEEDGMMASNTVDVTDSSTATPAEDSS-----GDGGRSGKEAPAANPTALMQPASRVTGLGDEEDTMSDMSEPLLPRGDRFDSRSSS 575          
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: D7FNH7_ECTSI (Tetracycline-efflux transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH7_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 8.710e-40
Identity = 88/180 (48.89%), Postives = 115/180 (63.89%), Query Frame = 0
Query:   10 FSLSLNVFSVYYNYFDFRYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSVGRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSLGVSTRIEKALGFLLPGLPLFCASGCGVVGLAVAWYALRK 189
            F LSLNVF+  YNY D+R+ W+P  IS +F+T+ IL+AL  G  IRF+VPKRL+  +G L G+++Q  S  + GL  RGWM Y  LV   LQ ITEPC+Q +MA  VG + QGSLQ + V  LR V +G+A  V+ Q+FS G S   E+A        P F A+   +V LAVAW+ LRK
Sbjct:  371 FVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVMVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGA-VMSLRVVGEGVAAPVFTQVFSAGASVGFEEA--------PFFLATAISLVSLAVAWWPLRK 541          
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: A0A7S1TPX7_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPX7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.480e-13
Identity = 50/162 (30.86%), Postives = 89/162 (54.94%), Query Frame = 0
Query:   13 SLNVFSVYYNYFDFRYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSVGRGVLLGLALQSSSTALFGLASRGWMCYVVLVATV-LQYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSLGVSTRIEKALGFLLPGLPLFCAS 173
            ++ VF V++   D+ Y W  + ++++ +  GIL+A    +  + LVPK  S  + VL+   +Q ++ + + LA  GW  Y++LV T  +  I  P ++G++ +    ++QGSLQ + +Q L  ++     +VYG  FS G S   ++ LG    GLPL  A+
Sbjct:  258 TMAVFGVWFYILDYNYDWGVVEVTIFITVAGILIAAAQVVGTKHLVPKVFSPAQAVLVASMVQCAAFSAYALAPVGWSIYLILVLTAGVGSIGAPSLRGILTSMAPPEQQGSLQGA-LQGLSQLTNAFMALVYGGAFSAGTSPFWKEHLGGHFAGLPLLIAA 418          
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: A0A6I1K2G3_9BACT (MFS transporter DHA1 family tetracycline resistance protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A6I1K2G3_9BACT)

HSP 1 Score: 79.7 bits (195), Expect = 3.890e-13
Identity = 52/170 (30.59%), Postives = 86/170 (50.59%), Query Frame = 0
Query:   23 YFDFRYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSVGRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQAS--SVQCLRNV-SQGLAGVVYGQIFSLGVSTRIEKALGFLLPGLPLFCASGCGVVGLAVAWYALRK 189
            Y  +RYHW+P    +  +  G+  A+  G   R ++P RL   R V +GL + ++    +GLA+ GWM YV++    +  I+ P +QG+++  VGAD QG++Q S  S+  +  V    LA  ++G   S G   +        LPG   F +S   V  + +A  + R+
Sbjct:  246 YTSYRYHWTPGQTGMSLAMVGLTAAIVQGGLTRAIIP-RLGERRSVTVGLTISAAGLIAYGLATEGWMAYVIIAVASISGISGPSVQGLISRSVGADEQGAVQGSLNSLASIAGVLGPPLATGLFGFFISAGAPVK--------LPGAAFFFSSALTVAAMLLAVRSFRR 406          
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: A0A535IJB1_9CHLR (TCR/Tet family MFS transporter n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535IJB1_9CHLR)

HSP 1 Score: 74.7 bits (182), Expect = 1.290e-11
Identity = 55/184 (29.89%), Postives = 98/184 (53.26%), Query Frame = 0
Query:    1 MQLAVVLSCFSLS-LNVFSVYYNYFDFRYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSVGRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSLGVSTRIEKALGFLLPGLPLFCASGCGVVGLAVA 183
            + L  V+ C +L+ L + S +  Y  +R++W+ L   L  +  G++  +  G  IR L P RL   R +L+ L        L+GLA++GWM YV++  T L ++++P  QG+++N V  + QG++Q +    + +++  +  +V   +FS    T  E+   F +PG   F  +   VVGL +A
Sbjct:  140 LNLTAVVVCNNLAGLALQSTWVLYNAYRFNWTALEQGLSLALVGVIAIVVQGWLIRVLQP-RLGERRLLLISLVSSVIGLVLYGLATQGWMMYVIMTVTALSFLSQPAAQGLISNAVKPNEQGAIQGALTSMI-SLTAIVGPIVGANVFSY--FTAPEQP--FKVPGAAFFLGAALTVVGLLLA 317          
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: A0A4P7JA95_9RHOB (MFS transporter n=1 Tax=Boseongicola sp. CCM32 TaxID=2552942 RepID=A0A4P7JA95_9RHOB)

HSP 1 Score: 73.2 bits (178), Expect = 6.210e-11
Identity = 59/193 (30.57%), Postives = 94/193 (48.70%), Query Frame = 0
Query:    3 LAVVLSCFSLSLNVFSVYYNYF-DFRYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSVGRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSLGVSTRIEKALGFLLPGLPLFCASGCGVVGLAVAWYALRKAGEPG 194
            L +V+  + +S  V+ V + Y+    + WS   I L  + +G+ +AL  GL IR ++P  L   R V  GL L  +    +GLAS GWM +V+L  + L  I  P +Q +M+   G D+QG LQ   +  L  +S  ++ +V  Q F        + AL    PG P   ++   + G  +  +  R+AG  G
Sbjct:  218 LLIVMFSYQISNFVYPVIWAYYTQAAFGWSTGQIGLSLAGYGLSVALVQGLLIRVILPV-LGESRAVFWGLLLNMACLVGYGLASAGWMIWVLLPISALGAIVAPAMQALMSRRAGPDQQGELQGV-LASLGALSMIISPLVMTQAFFWFTRAGADPAL----PGAPFLLSAVLMLAGFTIFAFGSRRAGADG 404          
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: A0A511N5B0_9DEIO (Tetracycline resistance MFS efflux pump n=2 Tax=Deinococcus TaxID=1298 RepID=A0A511N5B0_9DEIO)

HSP 1 Score: 68.9 bits (167), Expect = 1.630e-9
Identity = 49/162 (30.25%), Postives = 77/162 (47.53%), Query Frame = 0
Query:   27 RYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSVGRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSLGVSTRIEKALGFLLPGLPLFCASGCGVVGLAVAWYALR 188
            RY W P       +  G++ A+  G  +  L+PK L   R +LLGL L       FGLA++GWM YV++V   +  I  P IQG+++  V    QGS+Q +       VS  + G +         + +   A    +PG+P F  +   ++G  +A +A R
Sbjct:  243 RYGWGPQANGFSLTAVGVMGAIVQGALVGILIPK-LGEKRAILLGLGLGVLQFIAFGLATQGWMIYVIIVVGAIGGIAGPAIQGLVSRQVSETEQGSVQGALSGLWSLVS--IVGPILATFIFAYFTNKTNGAP--YIPGMPFFVGALMMLLGTFIAIWAFR 399          
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: UPI00094669C6 (MFS transporter n=1 Tax=Verrucomicrobium spinosum TaxID=2736 RepID=UPI00094669C6)

HSP 1 Score: 68.2 bits (165), Expect = 2.060e-9
Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 0
Query:   12 LSLNVF-SVYYNYFDFRYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSV---GRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSLGVSTRIEKALGFLLPGLP 168
            L+ N++ S++  Y   RY W   ++    +  GIL+A+  G     L  K L V    +G+ LGL   +   A +GLA++GW+ Y+VLV   L  I  P  Q ++   VG D QG++Q + +  L +V+  +  +++  +F++G+ T  EK    + PGLP
Sbjct:   81 LAQNIYPSLWVLYTGIRYGWDTKHVGASLAIVGILMAVVQG----GLAGKILGVLGDRKGLALGLLATALGMAGYGLATQGWVVYLVLVVGALGCIAGPAAQAMITREVGPDEQGAVQGA-LNSLTSVAGIVGPLLWTWLFAIGIGTDPEK----MQPGLP 232          
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: A0A521ZT07_9BACT (MFS transporter (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A521ZT07_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 3.050e-9
Identity = 43/152 (28.29%), Postives = 78/152 (51.32%), Query Frame = 0
Query:   23 YFDFRYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSVGRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSLGVSTRIEKALGFL-LPGLPLFCAS 173
            Y  +RY W+P  + L  +  G++  +  G   R ++PK L   R +++GL   +     +GLA++GWM YV+LV   +  I  P +QG+++  V  + QG++Q +           LAG+V G + + G+     +A   + +PG   F ++
Sbjct:    6 YTSYRYGWTPKEVGLSLALVGVMAVIVQGGLARKIIPK-LGERRSIVIGLTNATFFLTTYGLATQGWMVYVLLVVGSIGGIAMPALQGLVSRSVPLNEQGAVQGALASLA-----SLAGIV-GPLVATGLFGHFVRAEATVKIPGAAFFASA 150          
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Match: UPI000174537A (TCR/Tet family MFS transporter n=1 Tax=Verrucomicrobium spinosum TaxID=2736 RepID=UPI000174537A)

HSP 1 Score: 68.2 bits (165), Expect = 3.310e-9
Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 0
Query:   12 LSLNVF-SVYYNYFDFRYHWSPLNISLYFSTFGILLALTSGLFIRFLVPKRLSV---GRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSLGVSTRIEKALGFLLPGLP 168
            L+ N++ S++  Y   RY W   ++    +  GIL+A+  G     L  K L V    +G+ LGL   +   A +GLA++GW+ Y+VLV   L  I  P  Q ++   VG D QG++Q + +  L +V+  +  +++  +F++G+ T  EK    + PGLP
Sbjct:  228 LAQNIYPSLWVLYTGIRYGWDTKHVGASLAIVGILMAVVQG----GLAGKILGVLGDRKGLALGLLATALGMAGYGLATQGWVVYLVLVVGALGCIAGPAAQAMITREVGPDEQGAVQGA-LNSLTSVAGIVGPLLWTWLFAIGIGTDPEK----MQPGLP 379          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12475.1903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH6_ECTSI1.530e-16285.42Major facilitator transporter n=2 Tax=Ectocarpus T... [more]
D7FNH7_ECTSI8.710e-4048.89Tetracycline-efflux transporter n=1 Tax=Ectocarpus... [more]
A0A7S1TPX7_9STRA1.480e-1330.86Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A6I1K2G3_9BACT3.890e-1330.59MFS transporter DHA1 family tetracycline resistanc... [more]
A0A535IJB1_9CHLR1.290e-1129.89TCR/Tet family MFS transporter n=1 Tax=Chloroflexi... [more]
A0A4P7JA95_9RHOB6.210e-1130.57MFS transporter n=1 Tax=Boseongicola sp. CCM32 Tax... [more]
A0A511N5B0_9DEIO1.630e-930.25Tetracycline resistance MFS efflux pump n=2 Tax=De... [more]
UPI00094669C62.060e-931.68MFS transporter n=1 Tax=Verrucomicrobium spinosum ... [more]
A0A521ZT07_9BACT3.050e-928.29MFS transporter (Fragment) n=1 Tax=Verrucomicrobia... [more]
UPI000174537A3.310e-931.68TCR/Tet family MFS transporter n=1 Tax=Verrucomicr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..192
e-value: 1.5E-7
score: 32.9
NoneNo IPR availablePANTHERPTHR23504:SF1GH21943Pcoord: 16..183
NoneNo IPR availablePANTHERPTHR23504FAMILY NOT NAMEDcoord: 16..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..295
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 162..184
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 4..23
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 3..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12475contigE-fasciculatus_F_contig12475:2054..3959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12475.1903.1mRNA_E-fasciculatus_F_contig12475.1903.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12475 2054..3971 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12475.1903.1 ID=prot_E-fasciculatus_F_contig12475.1903.1|Name=mRNA_E-fasciculatus_F_contig12475.1903.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=296bp
MQLAVVLSCFSLSLNVFSVYYNYFDFRYHWSPLNISLYFSTFGILLALTS
GLFIRFLVPKRLSVGRGVLLGLALQSSSTALFGLASRGWMCYVVLVATVL
QYITEPCIQGVMANHVGADRQGSLQASSVQCLRNVSQGLAGVVYGQIFSL
GVSTRIEKALGFLLPGLPLFCASGCGVVGLAVAWYALRKAGEPGAADPKA
TTNPSDVDAEEGGVMASPTVDTADSSTAPPAENSSVGSDGGDCGHPGKET
PAANPAVLMRPASRATGLGDDEDTMSDMSEPLLPRGDRFDSRSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf