prot_E-fasciculatus_F_contig12472.1900.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12472.1900.1
Unique Nameprot_E-fasciculatus_F_contig12472.1900.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length98
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: D8LRP8_ECTSI (Rab GDP dissociation inhibitor n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP8_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 2.170e-60
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 
Query:    1 MLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            MLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV
Sbjct:   28 MLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 125
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BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: A0A835ZGN9_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN9_9STRA)

HSP 1 Score: 168 bits (425), Expect = 3.730e-48
Identity = 81/98 (82.65%), Postives = 89/98 (90.82%), Query Frame = 0 
Query:    1 MLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            MLADG YDAI+MGTGLKEA++SGLLST GMKVLHVDRN++YGG+CASLNLTNLY KFR G  P P LGHPTRDYNVDLIPKF+MA GNLVKMLL+TKV
Sbjct:   21 MLADGAYDAIIMGTGLKEAVISGLLSTKGMKVLHVDRNSWYGGDCASLNLTNLYGKFRAGADPPPSLGHPTRDYNVDLIPKFIMACGNLVKMLLLTKV 118
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BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: K3X8R5_GLOUD (Rab GDP dissociation inhibitor n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8R5_GLOUD)

HSP 1 Score: 149 bits (377), Expect = 3.680e-41
Identity = 74/97 (76.29%), Postives = 83/97 (85.57%), Query Frame = 0 
Query:    2 LADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            LADGEYDAIV+GTGLKE I+SGLL+  G KVLH+DRN YYGGECASLNLTNLY KF+PGQPP  +LG   RDYN+DL+PKF+MA G LVKMLL TKV
Sbjct:   20 LADGEYDAIVLGTGLKECILSGLLAVNGKKVLHLDRNAYYGGECASLNLTNLYQKFKPGQPPRDDLGA-NRDYNIDLVPKFIMACGKLVKMLLHTKV 115
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BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: A0A8K1CTA6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTA6_PYTOL)

HSP 1 Score: 147 bits (370), Expect = 3.760e-40
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 0 
Query:    2 LADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            LADGEYDAIV+GTGLKE I+SGLL+  G KVLH+DRN YYGGECASLNLTNLYNKF+P Q P  +LG   RDYN+DLIPKF+MA G LVKMLL TKV
Sbjct:   19 LADGEYDAIVLGTGLKECILSGLLAVNGKKVLHMDRNPYYGGECASLNLTNLYNKFKPDQEPRSDLGS-NRDYNIDLIPKFIMACGKLVKMLLHTKV 114
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: A0A7S2JVQ7_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVQ7_9STRA)

HSP 1 Score: 146 bits (369), Expect = 5.510e-40
Identity = 74/98 (75.51%), Postives = 82/98 (83.67%), Query Frame = 0 
Query:    1 MLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            +LADGEYDAIVMGTGLKE I+SGLLST GMK+LH+DRNNYYG +CASLNLTNLY KF+ GQ   PE     R+YNVDLIPKF+MA GNL KMLL TKV
Sbjct:   21 ILADGEYDAIVMGTGLKECILSGLLSTQGMKILHIDRNNYYGADCASLNLTNLYEKFQAGQ--VPEYLGSNREYNVDLIPKFIMACGNLTKMLLHTKV 116
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: V9EI70_PHYPR (Rab GDP dissociation inhibitor n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=V9EI70_PHYPR)

HSP 1 Score: 136 bits (343), Expect = 2.730e-39
Identity = 71/97 (73.20%), Postives = 78/97 (80.41%), Query Frame = 0 
Query:    2 LADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            LADGEYD IV+GTGLKE I+SGLL+  G KVL VDRN YYGGECAS NLTNLY KF+P Q P  +LG   RDYNVDL+PKF+MA G LVKMLL TKV
Sbjct:   19 LADGEYDVIVLGTGLKECILSGLLAVNGKKVLVVDRNPYYGGECASPNLTNLYKKFKPDQEPRTDLGA-DRDYNVDLVPKFIMACGKLVKMLLHTKV 114
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: T0Q659_SAPDV (Rab GDP dissociation inhibitor n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q659_SAPDV)

HSP 1 Score: 144 bits (364), Expect = 2.870e-39
Identity = 73/97 (75.26%), Postives = 81/97 (83.51%), Query Frame = 0 
Query:    2 LADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            LADGEYDAIV+GTGLKE I+SGLL+T G KVLH+DRN+YYGG+CASLNLTNLY KFR G  P   LG   RDYN+DLIPKF+MA G LVKMLL TKV
Sbjct:   20 LADGEYDAIVLGTGLKECILSGLLATKGQKVLHIDRNDYYGGDCASLNLTNLYGKFRNGAEPLTGLGS-NRDYNIDLIPKFIMACGKLVKMLLHTKV 115
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BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: F0W0X7_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0X7_9STRA)

HSP 1 Score: 143 bits (361), Expect = 7.840e-39
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 0 
Query:    2 LADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            LADGEYDAIV+GTGLKE I+SGLL+  G KVLH+DRN+YYGG+CASLNL NLY K++PG  P  ELG  +RDYN+DLIPKF+MA G LVKMLL TKV
Sbjct:   19 LADGEYDAIVLGTGLKECILSGLLAVNGKKVLHLDRNSYYGGDCASLNLANLYEKYKPGTKPPSELGS-SRDYNIDLIPKFIMACGKLVKMLLHTKV 114
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: A0A2D4BVL6_PYTIN (Rab GDP dissociation inhibitor n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVL6_PYTIN)

HSP 1 Score: 144 bits (364), Expect = 1.240e-38
Identity = 72/97 (74.23%), Postives = 82/97 (84.54%), Query Frame = 0 
Query:    2 LADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            LADGEYDAIV+GTGLKE I+SGLL+  G KVLH+DRN YYGG+CASLNLTNLY KF+PG+ P+  LG   RDYN+DLIPKF+MA G LVKMLL TKV
Sbjct:   19 LADGEYDAIVLGTGLKECILSGLLAVNGKKVLHLDRNPYYGGDCASLNLTNLYGKFKPGEEPSSALGS-NRDYNIDLIPKFIMACGKLVKMLLHTKV 114
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Match: A0A4D9CY77_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY77_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.370e-38
Identity = 74/99 (74.75%), Postives = 82/99 (82.83%), Query Frame = 0 
Query:    2 LADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRP--GQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV 98
            LADG YDAIVMGTGLKE I+SGLLS +G+KVLH+DRN YYGGECASLNLTNLY KFRP   + P   LG   RDYNVDL+PKF+MA GNLVK+LL TKV
Sbjct:   53 LADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGECASLNLTNLYAKFRPEGARDPPTALGS-NRDYNVDLVPKFIMACGNLVKILLHTKV 150
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12472.1900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRP8_ECTSI2.170e-60100.00Rab GDP dissociation inhibitor n=2 Tax=Ectocarpus ... [more]
A0A835ZGN9_9STRA3.730e-4882.65Rab GDP dissociation inhibitor n=1 Tax=Tribonema m... [more]
K3X8R5_GLOUD3.680e-4176.29Rab GDP dissociation inhibitor n=2 Tax=Pythiaceae ... [more]
A0A8K1CTA6_PYTOL3.760e-4076.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2JVQ7_9STRA5.510e-4075.51Rab GDP dissociation inhibitor n=1 Tax=Leptocylind... [more]
V9EI70_PHYPR2.730e-3973.20Rab GDP dissociation inhibitor n=2 Tax=Phytophthor... [more]
T0Q659_SAPDV2.870e-3975.26Rab GDP dissociation inhibitor n=3 Tax=Saprolegnia... [more]
F0W0X7_9STRA7.840e-3973.20Rab GDP dissociation inhibitor n=1 Tax=Albugo laib... [more]
A0A2D4BVL6_PYTIN1.240e-3874.23Rab GDP dissociation inhibitor n=1 Tax=Pythium ins... [more]
A0A4D9CY77_9STRA1.370e-3874.75Rab GDP dissociation inhibitor n=1 Tax=Nannochloro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018203GDP dissociation inhibitorPRINTSPR00891RABGDIREPcoord: 26..43
score: 68.06
coord: 8..26
score: 64.66
coord: 72..89
score: 75.79
coord: 89..98
score: 33.4
IPR018203GDP dissociation inhibitorPFAMPF00996GDIcoord: 4..98
e-value: 1.7E-41
score: 142.1
IPR018203GDP dissociation inhibitorPANTHERPTHR11787RAB GDP-DISSOCIATION INHIBITORcoord: 4..98
IPR000806Rab GDI proteinPRINTSPR00892RABGDIcoord: 78..91
score: 80.12
coord: 18..30
score: 53.18
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 2..62
e-value: 1.3E-19
score: 72.4
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 4..97
NoneNo IPR availableGENE3D3.30.519.10coord: 63..98
e-value: 1.7E-9
score: 39.0
NoneNo IPR availablePANTHERPTHR11787:SF8RAB GDP DISSOCIATION INHIBITORcoord: 4..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12472contigE-fasciculatus_F_contig12472:2732..3808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12472.1900.1mRNA_E-fasciculatus_F_contig12472.1900.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12472 2711..3808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12472.1900.1 ID=prot_E-fasciculatus_F_contig12472.1900.1|Name=mRNA_E-fasciculatus_F_contig12472.1900.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=98bp
MLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNL
TNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR000806RabGDI
IPR018203GDP_dissociation_inhibitor