mRNA_E-fasciculatus_F_contig1247.1897.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1247.1897.1 vs. uniprot
Match: D8LK32_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK32_ECTSI) HSP 1 Score: 124 bits (312), Expect = 5.520e-29 Identity = 69/171 (40.35%), Postives = 97/171 (56.73%), Query Frame = 2
Query: 518 MVLLLQSAVRLAERVQEADGGRAASTLNELLAGREVNDAVGD---SKQEEHNWLSTCPPTVYLYLMRFAH--GGGARSGRKLTQSVEIPTTIDLAPFTAKP-DTAGTEEPASYGLDGVVYHVGKTIGKGHFTACVRMSDKTWRHYNDDKYKNVSPNDVLTSEALMLAYTRQ 1012
M + ++ LA+ + D GRAA L +++ + VGD S EE L CPPT+ YL+RF H GG RKL+ V++P +ID+AP+T P +AG + Y L GVV+H G+T GH+TA V ++ + WR Y+D K V DVLT AL+L YTR+
Sbjct: 1 MGIRTEAITHLAKTREMGDHGRAAQHLRQVVESLKRTAQVGDVGRSTLEEKTSLKQCPPTILFYLIRFEHVRSGGTFVERKLSHHVDVPKSIDIAPYTRPPASSAGDPQSERYDLTGVVHHEGETTKTGHYTAFVHLAGEEWRRYDDSKVTKVGYEDVLTENALILTYTRR 171
BLAST of mRNA_E-fasciculatus_F_contig1247.1897.1 vs. uniprot
Match: A0A8H7S4K0_9FUNG (USP domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S4K0_9FUNG) HSP 1 Score: 64.7 bits (156), Expect = 9.890e-7 Identity = 31/113 (27.43%), Postives = 59/113 (52.21%), Query Frame = 2
Query: 680 PPTVYLYLMRFAHGGGARSGRKLTQSVEIPTTIDLAPFTAKPDTAGTEEPASYGLDGVVYHVGKTIGKGHFTACVRMSDKTWRHYNDDKYKNVSPNDVLTSEALMLAYTRQPS 1018
P + ++L RF RK+++ ++ P ID+AP+ + + + Y L GV+ H+G + GH+ + V+ SD W +D+ + S +VL+ +A +L Y ++ S
Sbjct: 316 PMMLTVHLKRFTFDLERGYMRKISERIQYPEVIDMAPYISVEEKQKLQGKTKYRLYGVLVHLGHSCNSGHYYSYVKNSDGQWYQMDDEMVEKASLKEVLSQQAYILFYAQETS 428
BLAST of mRNA_E-fasciculatus_F_contig1247.1897.1 vs. uniprot
Match: A0A178AH53_9PLEO (Cysteine proteinase n=1 Tax=Stagonospora sp. SRC1lsM3a TaxID=765868 RepID=A0A178AH53_9PLEO) HSP 1 Score: 63.5 bits (153), Expect = 3.010e-6 Identity = 44/147 (29.93%), Postives = 69/147 (46.94%), Query Frame = 2
Query: 668 LSTCPPTVYLYLMRFAHGGGARSGRKLTQSVEIPT-TIDLAPFTAKPDTAGTEE------------------------PASYGLDGVVYHVGKTIGKGHFTACVRMSDK-TWRHYNDDKYK-----NVSPNDVLTSE-ALMLAYTRQ 1012
++ P T+ ++ RF+ S RK+ V+ P ++D+APF P TA EE P Y V++H+G T+G GH+ A V+ K TWR +NDDK N++P + L +E A ++ Y R+
Sbjct: 910 ITRAPDTLVVHFKRFS-ASRTESARKIRTPVQFPLQSLDMAPFIEPPMTAKEEEYVAQNARDGPVQLAGIKSDPTMNGPFMYNAYAVIWHIGATLGSGHYIAFVKDKAKGTWRSFNDDKITDFEPANLAPQNRLQNEKAYIVFYERE 1055
BLAST of mRNA_E-fasciculatus_F_contig1247.1897.1 vs. uniprot
Match: A0A6A5Q954_AMPQU (Uncharacterized protein n=1 Tax=Ampelomyces quisqualis TaxID=50730 RepID=A0A6A5Q954_AMPQU) HSP 1 Score: 63.2 bits (152), Expect = 3.920e-6 Identity = 44/147 (29.93%), Postives = 70/147 (47.62%), Query Frame = 2
Query: 668 LSTCPPTVYLYLMRFAHGGGARSGRKLTQSVEIPT-TIDLAPFTAKPDTAGTEE------------------------PASYGLDGVVYHVGKTIGKGHFTACVRMSDK-TWRHYNDDKYK-----NVSPNDVLTSE-ALMLAYTRQ 1012
++ P T+ ++L RF+ +S RK+ V+ P ++D+APF P T EE P Y V++H+G T+G GH+ A V+ K TWR +NDDK N++P + L +E A ++ Y R+
Sbjct: 889 ITRAPDTLVVHLKRFS-ASRTQSARKIRTPVQFPLQSLDMAPFIQPPMTPKQEEYISQYAREGPSQLASIKADPTMNGPYIYNAYAVIWHIGATLGSGHYIAFVKDKAKGTWRSFNDDKVADFEPANLAPQNRLQNEKAYIVFYERE 1034
BLAST of mRNA_E-fasciculatus_F_contig1247.1897.1 vs. uniprot
Match: Q0U4Z9_PHANO (Uncharacterized protein n=2 Tax=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) TaxID=321614 RepID=Q0U4Z9_PHANO) HSP 1 Score: 60.8 bits (146), Expect = 1.930e-5 Identity = 39/134 (29.10%), Postives = 58/134 (43.28%), Query Frame = 2
Query: 668 LSTCPPTVYLYLMRFAHGGGARSGRKLTQSVEIPT-TIDLAPFTAKPDTAGTEE------------------------PASYGLDGVVYHVGKTIGKGHFTACVRMSDK-TWRHYNDDKYKNVSPNDVLTSEAL 991
L+ P T+ ++ RF+ S RK+ VE P ++D+ PF P T EE P Y V++H+G T+G GH+ A V+ K TWR +NDDK P ++ + L
Sbjct: 790 LTRAPDTLVVHFKRFS-ASRTESARKIRTPVEFPLQSLDMGPFIEPPMTPKEEEFIANNARDGHSQLAGIKADPHMNGPFIYNAYAVIWHIGATLGSGHYIAFVKDKAKGTWRSFNDDKITEFEPANLASQHRL 922
BLAST of mRNA_E-fasciculatus_F_contig1247.1897.1 vs. uniprot
Match: A0A2T2PC23_CORCC (Cysteine proteinase n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2PC23_CORCC) HSP 1 Score: 60.5 bits (145), Expect = 2.660e-5 Identity = 43/147 (29.25%), Postives = 67/147 (45.58%), Query Frame = 2
Query: 668 LSTCPPTVYLYLMRFAHGGGARSGRKLTQSVEIPTT-IDLAPFTAKPDTAGTEE------------------------PASYGLDGVVYHVGKTIGKGHFTACVR-MSDKTWRHYNDDKYK-----NVSPNDVLTSE-ALMLAYTRQ 1012
++ P T+ ++ RF+ G G +S RK+ +E P +DL PF P T E P Y V++H+G T+G GH+ A V+ S K WR YND + N++P + L +E A ++ Y R+
Sbjct: 942 ITRAPETLVVHFKRFSAGRG-QSARKIRTPIEFPLQGLDLGPFMEPPITPEQEAQVMQTSRDGAAQIVGLKTDPAMNGPFIYNAYAVIWHMGATLGSGHYVAMVKDKSRKCWRQYNDQQITDFEPANLAPQNRLQNEKAYVVFYERE 1087
BLAST of mRNA_E-fasciculatus_F_contig1247.1897.1 vs. uniprot
Match: A0A6A6WXX5_9PLEO (Cysteine proteinase n=1 Tax=Melanomma pulvis-pyrius CBS 109.77 TaxID=1314802 RepID=A0A6A6WXX5_9PLEO) HSP 1 Score: 59.7 bits (143), Expect = 4.560e-5 Identity = 48/174 (27.59%), Postives = 73/174 (41.95%), Query Frame = 2
Query: 602 ELLAGREVNDAVGDSKQEE---HNWLSTCPPTVYLYLMRFAHGGGARSGRKLTQSVEIPTT-IDLAPFTAKPDTAGTEE------------------------PASYGLDGVVYHVGKTIGKGHFTACVRMSDKT---WRHYNDDKYKNVSP------NDVLTSEALMLAYTRQ 1012
E L+G EV K E ++ P T+ ++ RF+ + RK+ + P +DL PF P T E P +Y V++H+G+T+G GH+ A VR DKT WR +NDDK + SP N + +A ++ Y R+
Sbjct: 910 ERLSGDEVWRCTRCKKDREAIKKITITRAPDTLVVHFKRFS-ASRTQGARKIRTPIHFPLDKLDLGPFVQPPITPEEEAYVMANSADAAAQLAGLKTDPAMNGPYTYNAYAVIWHIGQTLGSGHYIAMVR--DKTRGCWRQFNDDKISDFSPEKMSHENRLQNEKAYIVFYERE 1080
BLAST of mRNA_E-fasciculatus_F_contig1247.1897.1 vs. uniprot
Match: A0A8K0QY97_9PLEO (Uncharacterized protein n=1 Tax=Paraphoma chrysanthemicola TaxID=798071 RepID=A0A8K0QY97_9PLEO) HSP 1 Score: 58.9 bits (141), Expect = 7.800e-5 Identity = 39/147 (26.53%), Postives = 65/147 (44.22%), Query Frame = 2
Query: 668 LSTCPPTVYLYLMRFAHGGGARSGRKLTQSVEIPT-TIDLAPFTAKPDTAGTEE------------------------PASYGLDGVVYHVGKTIGKGHFTACVRMSDK-TWRHYNDDKYKNVSP------NDVLTSEALMLAYTRQ 1012
++ P T+ ++ RF+ G + RK+ V P ++D+ PF P T+ E+ P Y V++H+G T+G GH+ A V+ K TWR +NDDK + P N + +A ++ Y R+
Sbjct: 914 ITRAPDTLVVHFKRFSASRG-ENARKIRTPVHFPLQSLDMGPFMEPPITSKEEDVVARIARDGPAQLNNIKTDPAMNGPFIYNAYAVIWHIGATLGSGHYIAFVKDKAKGTWRSFNDDKITDFEPANLSAQNRLQNEKAYVVFYERE 1059 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1247.1897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1247.1897.1 >prot_E-fasciculatus_F_contig1247.1897.1 ID=prot_E-fasciculatus_F_contig1247.1897.1|Name=mRNA_E-fasciculatus_F_contig1247.1897.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=333bp MSDRTPVVSSQFFCSCGHASTIRTSKEVILTVPLAEGVEPQLGALLAERFback to top mRNA from alignment at E-fasciculatus_F_contig1247:1944..9985- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1247.1897.1 ID=mRNA_E-fasciculatus_F_contig1247.1897.1|Name=mRNA_E-fasciculatus_F_contig1247.1897.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8042bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1247:1944..9985- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1247:1944..9985- >mRNA_E-fasciculatus_F_contig1247.1897.1 ID=mRNA_E-fasciculatus_F_contig1247.1897.1|Name=mRNA_E-fasciculatus_F_contig1247.1897.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1998bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1247:1944..9985- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |