mRNA_E-fasciculatus_F_contig12457.1888.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: D8LDZ0_ECTSI (VWFA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDZ0_ECTSI) HSP 1 Score: 422 bits (1086), Expect = 2.940e-144 Identity = 238/240 (99.17%), Postives = 239/240 (99.58%), Query Frame = 1
Query: 16 LSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA 735
+ LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA
Sbjct: 2 ICLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA 241
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A7S2V4F9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F9_9STRA) HSP 1 Score: 333 bits (853), Expect = 7.770e-109 Identity = 178/245 (72.65%), Postives = 208/245 (84.90%), Query Frame = 1
Query: 1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA 735
L + + LDNSEWMRNGDYIPTRME+QHDAANLLCG+K SNPESTVGVL+MAG+ ELLVSPTDDMGKIL+SLH V + G+ N AA +QIAQLALKHRRNKHGGQR++IFV SP+ DE K L+KVGK+LKKNNVA DV+S+GE D+NQEKL++F+ AANS +N HL+T+PAGVLPSDVLI+SP++ EG XXXXXX XXXXXX G DFGG+DP++DPELAMALRVSMEEERARQEA
Sbjct: 33 LESTIVCLDNSEWMRNGDYIPTRMESQHDAANLLCGAKIQSNPESTVGVLSMAGRRVELLVSPTDDMGKILASLHEVPIQGRLNLAAAVQIAQLALKHRRNKHGGQRVVIFVGSPVLDEKKALIKVGKLLKKNNVAVDVISLGELDENQEKLQDFVEAANSSENSHLITVPAGVLPSDVLINSPVLQEGGAGMMAAXXXXXXXXXXXXXXXAG--DFGGIDPNLDPELAMALRVSMEEERARQEA 275
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A7S2CFG7_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFG7_9STRA) HSP 1 Score: 306 bits (783), Expect = 2.960e-98 Identity = 166/248 (66.94%), Postives = 199/248 (80.24%), Query Frame = 1
Query: 1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAA----DFGGVDPSMDPELAMALRVSMEEERARQE 732
L + + LDNSEWMRNGDY P+RME+ DAANL+ K SNPESTVGV+++AGKGPELL +PT+DMGKI+ S+H V++ GK NF G+Q+A LALKHRRNK+GGQRII+FV SP+ DE+K L KVGK+LKKNN+A DV+SMGE +DNQ KLEEF+ AANS +N HLV+IPAGV+P DVLI+SP+++EG XXXXXX XXXXXX DFGGVDP+MDPELAMALRVSMEEERARQE
Sbjct: 10 LESTVICLDNSEWMRNGDYQPSRMESMQDAANLVSKQKIQSNPESTVGVMSLAGKGPELLAAPTEDMGKIMGSIHDVNIFGKMNFVDGVQVAWLALKHRRNKNGGQRIIVFVGSPVHDESKALTKVGKLLKKNNIAVDVISMGELEDNQAKLEEFVNAANSSNNSHLVSIPAGVVPCDVLITSPVLNEGMGDGGGSXXXXXXXXXXXXXXXXXXXXXXXDFGGVDPNMDPELAMALRVSMEEERARQE 257
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: K3WTP6_GLOUD (VWFA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTP6_GLOUD) HSP 1 Score: 302 bits (773), Expect = 3.300e-98 Identity = 151/247 (61.13%), Postives = 189/247 (76.52%), Query Frame = 1
Query: 1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGA--ADFGGVDPSMDPELAMALRVSMEEERARQEA 735
L + + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT SNPESTVGVLTMAGK ++L SPT+ MG +L+++H VS+ G+ + IQ+AQLALKHRRNK GGQR+++F+ SPI ++ KTL K+GK+LKKNN+A DV+SMGE D N KL+ F+ AANS +N HLVT+PAGVLPSDVL+SSP++ + GG A++GG+DPSMDPELA+ALRVSMEEERARQEA
Sbjct: 3 LESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQSNPESTVGVLTMAGKSVQVLASPTESMGTLLNAVHSVSIGGEMKLSNAIQVAQLALKHRRNKTGGQRVVVFIGSPITEDDKTLTKIGKLLKKNNIAVDVISMGEVDANAAKLQVFVDAANSNNNSHLVTVPAGVLPSDVLVSSPVLH----------GDDSPMVTGGGTSAGGDNFAEYGGIDPSMDPELALALRVSMEEERARQEA 239
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A835Z3J6_9STRA (Putative 26S proteasome non-ATPase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J6_9STRA) HSP 1 Score: 301 bits (770), Expect = 7.990e-98 Identity = 145/187 (77.54%), Postives = 167/187 (89.30%), Query Frame = 1
Query: 1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVS 561
L + + LDNSEWMRNGDYIPTRMEAQHDAANL+CG+KT SNPESTVGVLTMAG GPELLVSPTDDMGKILSSLH V + G+T +A +QIAQLALKHRRNKHGGQR+++FV+SP+ D+ K L+KVGK+LKKNNVA DVVSMGE DDNQEKL+E I AANSGDN HL+T+PAG+LPSDVLI+SPIV+
Sbjct: 3 LESTMICLDNSEWMRNGDYIPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGTGPELLVSPTDDMGKILSSLHDVKIGGRTCVSAAVQIAQLALKHRRNKHGGQRLVLFVASPVTDDVKALIKVGKLLKKNNVAVDVVSMGEIDDNQEKLQELIDAANSGDNSHLITVPAGILPSDVLITSPIVA 189
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A8K1FNX1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNX1_PYTOL) HSP 1 Score: 300 bits (769), Expect = 1.330e-97 Identity = 161/247 (65.18%), Postives = 199/247 (80.57%), Query Frame = 1
Query: 1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIV--SEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA 735
L + + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT SNPESTVG+LTMAGKG ++L SPT++MG +L+++H VS+ G F+ +Q+AQLALKHRRNK G QR+++F+ SPI ++ K L K+GK+LKKNN+A DVVS+GETD N KL+ F+ AANS +N HLVT+P GVLPSDVL+SSP++ EG XXXXXXXXXXX A++GGVDPSMDPELA+ALRVSMEEERARQEA
Sbjct: 3 LESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGAKTQSNPESTVGILTMAGKGVQVLASPTENMGTLLTAVHNVSIGGALKFSNALQVAQLALKHRRNKTGAQRVVVFIGSPIVEDEKALTKIGKLLKKNNIAVDVVSLGETDANGPKLQAFVDAANSNNNSHLVTVPTGVLPSDVLVSSPVIHGEEGGMXXXXXXXXXXXESF---------AEYGGVDPSMDPELALALRVSMEEERARQEA 240
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A2D4BJ33_PYTIN (26S proteasome non-ATPase regulatory subunit, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJ33_PYTIN) HSP 1 Score: 295 bits (754), Expect = 2.980e-95 Identity = 149/246 (60.57%), Postives = 187/246 (76.02%), Query Frame = 1
Query: 1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGA-ADFGGVDPSMDPELAMALRVSMEEERARQEA 735
L + + LDNSEWMRNGDYIPTR+EAQHDAANLLCG+KT SNPESTVG+LTMAG+ ++L SPT++MG +LS++H ++V G + +Q+AQLALKHRRNK G QR+++FV SPI ++ K LVK+GK+LKKNN+A DVVS+G+ D N KL+ F+ AA+S +N HLVT+P GVLPSDVL+SSPI+ + G A A+FGGVDPSMDPELA+ALRVSMEEERARQEA
Sbjct: 3 LESTMICLDNSEWMRNGDYIPTRLEAQHDAANLLCGAKTQSNPESTVGILTMAGRSVQVLASPTENMGTLLSAVHSITVGGTLKLSNALQVAQLALKHRRNKTGAQRVVVFVGSPIVEDEKALVKIGKLLKKNNIAVDVVSLGDIDANGPKLQAFVDAASSSNNSHLVTVPPGVLPSDVLVSSPIIH----------GDDGGMGSMAGAGMGDAFAEFGGVDPSMDPELALALRVSMEEERARQEA 238
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A5D6YEV7_9STRA (VWFA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEV7_9STRA) HSP 1 Score: 293 bits (750), Expect = 1.400e-94 Identity = 148/248 (59.68%), Postives = 186/248 (75.00%), Query Frame = 1
Query: 1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGA-----ADFGGVDPSMDPELAMALRVSMEEERARQ 729
L A + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT SNPESTVGVLTMAGK ++L SPT++MG +L+++H V + G+ + +Q+AQLALKHRR K GGQR+++FV SPI ++ +TLVK+GK+LKKNN+A DVVSMGE D N KL+ F+ AANS N HLVT+PAGVLPSDVL+SSP++ + GA A++GG+DPS+DPELA+ALRVSMEEERARQ
Sbjct: 3 LEATMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQSNPESTVGVLTMAGKSVQVLASPTENMGTLLNAVHSVKIGGELKLSNALQVAQLALKHRRTKTGGQRVVVFVGSPIVEDDRTLVKIGKLLKKNNIAVDVVSMGEVDANAAKLQVFVDAANSNSNSHLVTVPAGVLPSDVLVSSPVLH----------GDDSPMVTSGGGAAAGAGGDAFAEYGGIDPSLDPELALALRVSMEEERARQ 240
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A484E0Z0_BRELC (VWFA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0Z0_BRELC) HSP 1 Score: 292 bits (747), Expect = 3.630e-94 Identity = 147/247 (59.51%), Postives = 184/247 (74.49%), Query Frame = 1
Query: 1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGA----ADFGGVDPSMDPELAMALRVSMEEERARQ 729
L + + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT +NPESTVGVL MAGK ++L SPTD+MG +LS++H + + G T + IQ+AQLALKHRRNK GGQR+++F+ SPI ++ K L K+GK+LKKNN+A DVVSMG+ D N KL+ F+ AA+S +N HLVT+PAGVLPSDVL+SSP++ GG A++GGVDPSMDPELA+ALRVSMEEERARQ
Sbjct: 3 LESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGSLLSAIHRIKIGGSTQLSNSIQVAQLALKHRRNKTGGQRVVVFIGSPIGEDEKQLTKIGKLLKKNNIALDVVSMGDLDANSAKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLH-----------GDDGAADAVASSGGGGNESFAEYGGVDPSMDPELALALRVSMEEERARQ 238
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A0P1B661_PLAHL (Multiubiquitin chain binding protein mbp1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B661_PLAHL) HSP 1 Score: 290 bits (741), Expect = 1.360e-93 Identity = 156/239 (65.27%), Postives = 192/239 (80.33%), Query Frame = 1
Query: 1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEE 717
L + + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT +NPESTVGVL MAGK ++L SPTD+MG +LS++HGV + G + IQ+AQLALKHRRNK GGQR+++F+ SPIE++ K L K+GK+LKKNN+A DVVSMG+ D N KL+ F+ AA+S +N HLVT+PAGVLPSDVL+SSP++ XXXXXXXXXXXXX A++GGVDPSMDPELA+ALRVSMEEE
Sbjct: 3 LESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHGVKIGGSMKLSNAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGDMDTNASKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLHGDXXXXXXXXXXXXXXSDAF-------AEYGGVDPSMDPELALALRVSMEEE 234 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12457.1888.1 >prot_E-fasciculatus_F_contig12457.1888.1 ID=prot_E-fasciculatus_F_contig12457.1888.1|Name=mRNA_E-fasciculatus_F_contig12457.1888.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=311bp LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLback to top mRNA from alignment at E-fasciculatus_F_contig12457:531..3739- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12457.1888.1 ID=mRNA_E-fasciculatus_F_contig12457.1888.1|Name=mRNA_E-fasciculatus_F_contig12457.1888.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3209bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12457:531..3739- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12457:531..3739- >mRNA_E-fasciculatus_F_contig12457.1888.1 ID=mRNA_E-fasciculatus_F_contig12457.1888.1|Name=mRNA_E-fasciculatus_F_contig12457.1888.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1866bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12457:531..3739- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |