mRNA_E-fasciculatus_F_contig12457.1888.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12457.1888.1
Unique NamemRNA_E-fasciculatus_F_contig12457.1888.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: D8LDZ0_ECTSI (VWFA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDZ0_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 2.940e-144
Identity = 238/240 (99.17%), Postives = 239/240 (99.58%), Query Frame = 1
Query:   16 LSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA 735
            + LDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA
Sbjct:    2 ICLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA 241          
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A7S2V4F9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F9_9STRA)

HSP 1 Score: 333 bits (853), Expect = 7.770e-109
Identity = 178/245 (72.65%), Postives = 208/245 (84.90%), Query Frame = 1
Query:    1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA 735
            L +  + LDNSEWMRNGDYIPTRME+QHDAANLLCG+K  SNPESTVGVL+MAG+  ELLVSPTDDMGKIL+SLH V + G+ N AA +QIAQLALKHRRNKHGGQR++IFV SP+ DE K L+KVGK+LKKNNVA DV+S+GE D+NQEKL++F+ AANS +N HL+T+PAGVLPSDVLI+SP++ EG       XXXXXX XXXXXX   G  DFGG+DP++DPELAMALRVSMEEERARQEA
Sbjct:   33 LESTIVCLDNSEWMRNGDYIPTRMESQHDAANLLCGAKIQSNPESTVGVLSMAGRRVELLVSPTDDMGKILASLHEVPIQGRLNLAAAVQIAQLALKHRRNKHGGQRVVIFVGSPVLDEKKALIKVGKLLKKNNVAVDVISLGELDENQEKLQDFVEAANSSENSHLITVPAGVLPSDVLINSPVLQEGGAGMMAAXXXXXXXXXXXXXXXAG--DFGGIDPNLDPELAMALRVSMEEERARQEA 275          
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A7S2CFG7_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFG7_9STRA)

HSP 1 Score: 306 bits (783), Expect = 2.960e-98
Identity = 166/248 (66.94%), Postives = 199/248 (80.24%), Query Frame = 1
Query:    1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAA----DFGGVDPSMDPELAMALRVSMEEERARQE 732
            L +  + LDNSEWMRNGDY P+RME+  DAANL+   K  SNPESTVGV+++AGKGPELL +PT+DMGKI+ S+H V++ GK NF  G+Q+A LALKHRRNK+GGQRII+FV SP+ DE+K L KVGK+LKKNN+A DV+SMGE +DNQ KLEEF+ AANS +N HLV+IPAGV+P DVLI+SP+++EG       XXXXXX XXXXXX          DFGGVDP+MDPELAMALRVSMEEERARQE
Sbjct:   10 LESTVICLDNSEWMRNGDYQPSRMESMQDAANLVSKQKIQSNPESTVGVMSLAGKGPELLAAPTEDMGKIMGSIHDVNIFGKMNFVDGVQVAWLALKHRRNKNGGQRIIVFVGSPVHDESKALTKVGKLLKKNNIAVDVISMGELEDNQAKLEEFVNAANSSNNSHLVSIPAGVVPCDVLITSPVLNEGMGDGGGSXXXXXXXXXXXXXXXXXXXXXXXDFGGVDPNMDPELAMALRVSMEEERARQE 257          
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: K3WTP6_GLOUD (VWFA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTP6_GLOUD)

HSP 1 Score: 302 bits (773), Expect = 3.300e-98
Identity = 151/247 (61.13%), Postives = 189/247 (76.52%), Query Frame = 1
Query:    1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGA--ADFGGVDPSMDPELAMALRVSMEEERARQEA 735
            L +  + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT SNPESTVGVLTMAGK  ++L SPT+ MG +L+++H VS+ G+   +  IQ+AQLALKHRRNK GGQR+++F+ SPI ++ KTL K+GK+LKKNN+A DV+SMGE D N  KL+ F+ AANS +N HLVT+PAGVLPSDVL+SSP++                +        GG   A++GG+DPSMDPELA+ALRVSMEEERARQEA
Sbjct:    3 LESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQSNPESTVGVLTMAGKSVQVLASPTESMGTLLNAVHSVSIGGEMKLSNAIQVAQLALKHRRNKTGGQRVVVFIGSPITEDDKTLTKIGKLLKKNNIAVDVISMGEVDANAAKLQVFVDAANSNNNSHLVTVPAGVLPSDVLVSSPVLH----------GDDSPMVTGGGTSAGGDNFAEYGGIDPSMDPELALALRVSMEEERARQEA 239          
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A835Z3J6_9STRA (Putative 26S proteasome non-ATPase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J6_9STRA)

HSP 1 Score: 301 bits (770), Expect = 7.990e-98
Identity = 145/187 (77.54%), Postives = 167/187 (89.30%), Query Frame = 1
Query:    1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVS 561
            L +  + LDNSEWMRNGDYIPTRMEAQHDAANL+CG+KT SNPESTVGVLTMAG GPELLVSPTDDMGKILSSLH V + G+T  +A +QIAQLALKHRRNKHGGQR+++FV+SP+ D+ K L+KVGK+LKKNNVA DVVSMGE DDNQEKL+E I AANSGDN HL+T+PAG+LPSDVLI+SPIV+
Sbjct:    3 LESTMICLDNSEWMRNGDYIPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGTGPELLVSPTDDMGKILSSLHDVKIGGRTCVSAAVQIAQLALKHRRNKHGGQRLVLFVASPVTDDVKALIKVGKLLKKNNVAVDVVSMGEIDDNQEKLQELIDAANSGDNSHLITVPAGILPSDVLITSPIVA 189          
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A8K1FNX1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNX1_PYTOL)

HSP 1 Score: 300 bits (769), Expect = 1.330e-97
Identity = 161/247 (65.18%), Postives = 199/247 (80.57%), Query Frame = 1
Query:    1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIV--SEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEA 735
            L +  + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT SNPESTVG+LTMAGKG ++L SPT++MG +L+++H VS+ G   F+  +Q+AQLALKHRRNK G QR+++F+ SPI ++ K L K+GK+LKKNN+A DVVS+GETD N  KL+ F+ AANS +N HLVT+P GVLPSDVL+SSP++   EG  XXXXXXXXXXX            A++GGVDPSMDPELA+ALRVSMEEERARQEA
Sbjct:    3 LESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGAKTQSNPESTVGILTMAGKGVQVLASPTENMGTLLTAVHNVSIGGALKFSNALQVAQLALKHRRNKTGAQRVVVFIGSPIVEDEKALTKIGKLLKKNNIAVDVVSLGETDANGPKLQAFVDAANSNNNSHLVTVPTGVLPSDVLVSSPVIHGEEGGMXXXXXXXXXXXESF---------AEYGGVDPSMDPELALALRVSMEEERARQEA 240          
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A2D4BJ33_PYTIN (26S proteasome non-ATPase regulatory subunit, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJ33_PYTIN)

HSP 1 Score: 295 bits (754), Expect = 2.980e-95
Identity = 149/246 (60.57%), Postives = 187/246 (76.02%), Query Frame = 1
Query:    1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGA-ADFGGVDPSMDPELAMALRVSMEEERARQEA 735
            L +  + LDNSEWMRNGDYIPTR+EAQHDAANLLCG+KT SNPESTVG+LTMAG+  ++L SPT++MG +LS++H ++V G    +  +Q+AQLALKHRRNK G QR+++FV SPI ++ K LVK+GK+LKKNN+A DVVS+G+ D N  KL+ F+ AA+S +N HLVT+P GVLPSDVL+SSPI+                +        G A A+FGGVDPSMDPELA+ALRVSMEEERARQEA
Sbjct:    3 LESTMICLDNSEWMRNGDYIPTRLEAQHDAANLLCGAKTQSNPESTVGILTMAGRSVQVLASPTENMGTLLSAVHSITVGGTLKLSNALQVAQLALKHRRNKTGAQRVVVFVGSPIVEDEKALVKIGKLLKKNNIAVDVVSLGDIDANGPKLQAFVDAASSSNNSHLVTVPPGVLPSDVLVSSPIIH----------GDDGGMGSMAGAGMGDAFAEFGGVDPSMDPELALALRVSMEEERARQEA 238          
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A5D6YEV7_9STRA (VWFA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEV7_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.400e-94
Identity = 148/248 (59.68%), Postives = 186/248 (75.00%), Query Frame = 1
Query:    1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGA-----ADFGGVDPSMDPELAMALRVSMEEERARQ 729
            L A  + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT SNPESTVGVLTMAGK  ++L SPT++MG +L+++H V + G+   +  +Q+AQLALKHRR K GGQR+++FV SPI ++ +TLVK+GK+LKKNN+A DVVSMGE D N  KL+ F+ AANS  N HLVT+PAGVLPSDVL+SSP++                +         GA     A++GG+DPS+DPELA+ALRVSMEEERARQ
Sbjct:    3 LEATMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQSNPESTVGVLTMAGKSVQVLASPTENMGTLLNAVHSVKIGGELKLSNALQVAQLALKHRRTKTGGQRVVVFVGSPIVEDDRTLVKIGKLLKKNNIAVDVVSMGEVDANAAKLQVFVDAANSNSNSHLVTVPAGVLPSDVLVSSPVLH----------GDDSPMVTSGGGAAAGAGGDAFAEYGGIDPSLDPELALALRVSMEEERARQ 240          
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A484E0Z0_BRELC (VWFA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0Z0_BRELC)

HSP 1 Score: 292 bits (747), Expect = 3.630e-94
Identity = 147/247 (59.51%), Postives = 184/247 (74.49%), Query Frame = 1
Query:    1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGA----ADFGGVDPSMDPELAMALRVSMEEERARQ 729
            L +  + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT +NPESTVGVL MAGK  ++L SPTD+MG +LS++H + + G T  +  IQ+AQLALKHRRNK GGQR+++F+ SPI ++ K L K+GK+LKKNN+A DVVSMG+ D N  KL+ F+ AA+S +N HLVT+PAGVLPSDVL+SSP++                         GG     A++GGVDPSMDPELA+ALRVSMEEERARQ
Sbjct:    3 LESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGSLLSAIHRIKIGGSTQLSNSIQVAQLALKHRRNKTGGQRVVVFIGSPIGEDEKQLTKIGKLLKKNNIALDVVSMGDLDANSAKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLH-----------GDDGAADAVASSGGGGNESFAEYGGVDPSMDPELALALRVSMEEERARQ 238          
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Match: A0A0P1B661_PLAHL (Multiubiquitin chain binding protein mbp1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B661_PLAHL)

HSP 1 Score: 290 bits (741), Expect = 1.360e-93
Identity = 156/239 (65.27%), Postives = 192/239 (80.33%), Query Frame = 1
Query:    1 LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGXXXXXXXXXXXXXLXXXXXXEFGGAADFGGVDPSMDPELAMALRVSMEEE 717
            L +  + LDNSEWMRNGDYIP+R+EAQHDAANLLCG+KT +NPESTVGVL MAGK  ++L SPTD+MG +LS++HGV + G    +  IQ+AQLALKHRRNK GGQR+++F+ SPIE++ K L K+GK+LKKNN+A DVVSMG+ D N  KL+ F+ AA+S +N HLVT+PAGVLPSDVL+SSP++   XXXXXXXXXXXXX            A++GGVDPSMDPELA+ALRVSMEEE
Sbjct:    3 LESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHGVKIGGSMKLSNAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGDMDTNASKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLHGDXXXXXXXXXXXXXXSDAF-------AEYGGVDPSMDPELALALRVSMEEE 234          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12457.1888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDZ0_ECTSI2.940e-14499.17VWFA domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2V4F9_9STRA7.770e-10972.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2CFG7_9STRA2.960e-9866.94Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
K3WTP6_GLOUD3.300e-9861.13VWFA domain-containing protein n=1 Tax=Globisporan... [more]
A0A835Z3J6_9STRA7.990e-9877.54Putative 26S proteasome non-ATPase regulatory subu... [more]
A0A8K1FNX1_PYTOL1.330e-9765.18Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BJ33_PYTIN2.980e-9560.5726S proteasome non-ATPase regulatory subunit, puta... [more]
A0A5D6YEV7_9STRA1.400e-9459.68VWFA domain-containing protein n=1 Tax=Pythium bra... [more]
A0A484E0Z0_BRELC3.630e-9459.51VWFA domain-containing protein n=1 Tax=Bremia lact... [more]
A0A0P1B661_PLAHL1.360e-9365.27Multiubiquitin chain binding protein mbp1 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12457contigE-fasciculatus_F_contig12457:531..3739 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score424.1
Seed ortholog evalue5.7e-116
Seed eggNOG ortholog2880.D8LDZ0
Preferred namePSMD4
KEGG rclassRC00002,RC00078
KEGG koko:K00889,ko:K03029
KEGG ReactionR03469
KEGG Pathwayko00562,ko01100,ko03050,ko04011,ko04070,ko04072,ko04139,ko04144,ko04666,ko04810,ko05169,ko05231,map00562,map01100,map03050,map04011,map04070,map04072,map04139,map04144,map04666,map04810,map05169,map05231
KEGG ModuleM00130,M00341
GOsGO:0000003,GO:0000070,GO:0000278,GO:0000280,GO:0000502,GO:0000819,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005838,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007088,GO:0007276,GO:0007283,GO:0007346,GO:0008134,GO:0008150,GO:0008152,GO:0008270,GO:0008540,GO:0008541,GO:0009056,GO:0009057,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0016043,GO:0016579,GO:0019538,GO:0019899,GO:0019941,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0022624,GO:0030071,GO:0030163,GO:0031331,GO:0031593,GO:0031624,GO:0031974,GO:0031981,GO:0032182,GO:0032270,GO:0032436,GO:0032501,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034622,GO:0036211,GO:0036435,GO:0042802,GO:0043130,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043248,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044390,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046872,GO:0046914,GO:0048232,GO:0048285,GO:0048518,GO:0048522,GO:0048609,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051276,GO:0051603,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065003,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0090068,GO:0098813,GO:0140014,GO:0140030,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903047,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
EggNOG free text desc.Protein of unknown function (DUF1631)
EggNOG OGsCOG5148@1,KOG2884@2759
EC2.7.1.68
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03051,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionvon Willebrand factor, type A
Ec32 orthologEc-23_003240.1
Exons5
Model size933
Cds size933
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12457.1888.1prot_E-fasciculatus_F_contig12457.1888.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12457 531..3739 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927751.6931484-CDS-E-fasciculatus_F_contig12457:530..8081622927751.6931484-CDS-E-fasciculatus_F_contig12457:530..808Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 531..808 -
1695995679.5750725-CDS-E-fasciculatus_F_contig12457:530..8081695995679.5750725-CDS-E-fasciculatus_F_contig12457:530..808Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 531..808 -
1622927751.7076972-CDS-E-fasciculatus_F_contig12457:1067..12751622927751.7076972-CDS-E-fasciculatus_F_contig12457:1067..1275Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 1068..1275 -
1695995679.5872436-CDS-E-fasciculatus_F_contig12457:1067..12751695995679.5872436-CDS-E-fasciculatus_F_contig12457:1067..1275Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 1068..1275 -
1622927751.7183986-CDS-E-fasciculatus_F_contig12457:2110..22001622927751.7183986-CDS-E-fasciculatus_F_contig12457:2110..2200Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 2111..2200 -
1695995679.5977616-CDS-E-fasciculatus_F_contig12457:2110..22001695995679.5977616-CDS-E-fasciculatus_F_contig12457:2110..2200Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 2111..2200 -
1622927751.727162-CDS-E-fasciculatus_F_contig12457:2780..29991622927751.727162-CDS-E-fasciculatus_F_contig12457:2780..2999Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 2781..2999 -
1695995679.6060514-CDS-E-fasciculatus_F_contig12457:2780..29991695995679.6060514-CDS-E-fasciculatus_F_contig12457:2780..2999Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 2781..2999 -
1622927751.7365324-CDS-E-fasciculatus_F_contig12457:3601..37391622927751.7365324-CDS-E-fasciculatus_F_contig12457:3601..3739Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 3602..3739 -
1695995679.6146033-CDS-E-fasciculatus_F_contig12457:3601..37391695995679.6146033-CDS-E-fasciculatus_F_contig12457:3601..3739Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12457 3602..3739 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12457.1888.1

>prot_E-fasciculatus_F_contig12457.1888.1 ID=prot_E-fasciculatus_F_contig12457.1888.1|Name=mRNA_E-fasciculatus_F_contig12457.1888.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=311bp
LRALFLSLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVL
TMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRR
NKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQE
KLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSEGGGGGGGGGGGG
GGLAAGGGGEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEAASKAT
AEQEGAAATDAAPPVEGEPAAAAAATAAAAGGSGEEAARSTEEGKGAESG
DAAGATNAMQV
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mRNA from alignment at E-fasciculatus_F_contig12457:531..3739-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12457.1888.1 ID=mRNA_E-fasciculatus_F_contig12457.1888.1|Name=mRNA_E-fasciculatus_F_contig12457.1888.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3209bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12457:531..3739- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTGCGCGCTCTTTTCCTCAGCCTCGACAACTCTGAGTGGATGAGAAACGG AGACTACATCCCCACCCGGATGGAGGCCCAGCACGACGCGGCCAACCTTC TCTGCGGCAGCAAGACCAACTCCAACCCGGAGAGCACGGTGAGACATAGG AGAGGTTTCGGAGTGAGGGAGGCTCACAAGACGGGGATTAGGAAGAAATG CAAGAACAAACACCCAAACACTACAATACCCGTTCGAGGTATATCCACAG TCGGATGTGTTGAAGTCTTTGCAGTGAGTGGAAAGAAAACCGGCTGGATA CTGGGCTTATTTAGTGTCTGTTTGAGCCTACACACGGTTCCTGGCATGCC GGATAGTTATGCGTACGTACCACACCTTCTCTTGGAGCATACATTGGCTG TGTGGAGCAACGACTAGATTTCCCCTTCTTGCCTGACCAGTTTCTGGTTC ATCCTCGTGTAAAATGTAACCGGGGCCGGCATTTCGCTTCGCTGTCCCGG CATGGTAGGGATGCGAGGAGGACAATGGTCTAACGACTTCAGTACGGCAT GCGTTCTTTCCCCTTTTCCTGTGACCCATGTCTTTTTCTCATTTTTCATG ATTTTTCCAATTTTTTTCATTTTCGTTCCTGTGACCCTTTTTTTTCTCAT TTTCCTGATATTTACCATTTTCGTTGCTGCGACCCATTTGTTTTTCCATT CATTCTTGTGAAACGAAACAAACACGGCATACATACCTAGGTCGGCGTTC TCACCATGGCCGGGAAGGGCCCCGAGCTCCTCGTTAGCCCCACCGACGAC ATGGGCAAGATCCTCTCCTCCCTCCATGGCGTGTCCGTCCACGGCAAGAC CAACTTCGCGGCGGGCATCCAGATCGCCCAGCTCGCCCTCAAGCACCGTC GGAACAAGCACGGGGGGCAGAGGATCATCATATTCGTCTCGTCTCCCATC GAGGACGAGGTAGGATTGGATGGATGGATAGATGGGTATGGTGGCGGCGT CCGCGCTTGCGCGTGTTGTTTCTCCGCCTGTCTGTCTGTCTGTCTGTCTG TCTGTCTGTCTGTCTGTCTGTCTGTCTGTTTCTCGTCTCTCTTTCGTTCT AACTTTCACGTCCTGCACCATGAGATGGGTTGATCTGTCGTGAACTACCA TATGAGATGGTGTGTGCCAGGACCATCTTTTCTCTCTTTCGTGAGTTTTT TGTTGCGCGACAGCATCAGCAGAGGGCGAGGCACGTACCGCCCCCCCCGC CCCCTCCAATGGACGGCACTCCCCTCTCGTCGAAACCCGTCGCATGACCT TCTTTTGTTTACTTCACGATAAAAAGTAGGCGATCGTTTCGATCTTGTGC TGGTCACGCCCTCCTGTCAATGGAAATACCTCCCTGCCAGAAGCCCTGTT GTGAAGCGTGCATCACGTTTGTTCTGGTTGGACGTAGAGCGCCCCCGTGA CGTAGAAGAGAAAAGCCATCGAAACGATCGTCGCTGGTGCCGCTACCGTT GCCGTTTCGGTCTCTCTCTGCTGCTGTCTCGCTGTCCAGACGAAGACGCT GGTGAAGGTGGGAAAGATGCTCAAGAAGAACAACGTGGCGGCGGATGTTG TTTCCATGGGGGAGACCGACGACAACCAGGTAGGTCCCTTGGCCTGACCT CTGACCTCTGGCGTCTGTCGTTGTGGAGTGTTGTCGAACTACAGTGGCAT CGACCTCACGAACAACCTGACCAATAGCAAGGCGCCAGCCTTCTGGCGGG ACGAATAACGCCATAACGTGTGTGTCTTTTGGTTGTTGGTAGCATCGACC GCGCTAACAGGCTGACCAATGAAAAGACGTCAGCCTCAGCGCGGTTGAAA CCACAAAAAGTTTCGAGAGGGTTGGAATACTTTTCGTCGATGAAACAAAA ACAAGTTTCAACGAGAGACTTTGCTGCGCCTGCTTGGCCCTCTTTCTTCC TTCTCTTTCTCCTTTTTCCTTAAATGTCATCACGGACGGCCATTATTTGT AACGCGTTGCCCGCTTTCACCATCGCCTTGTGGCTCGCCTCCTTGTGATA CTGCTGTCTGTGTTGTGTTGTGTTGTGTTGTCGTACGCAAGCACAGTGTC ACCTCGTTGAGCTTGCTTGTGTTTCCTCGACGAACAAGATCGGAACCCAA AACGACAGACAGCATCATCTACGACAACGTTATTTTATTACCATTAGCAC TAACGGTACAAGGCACCACAAGAGGGGTGGACAGGGGGATGAACCCTGCT ACGGATTGGAGCTCCCAATCCTGGAACAGCAGTGAGCGTGGTACAGTGTG TCTGTCTGTGTCTGTGTGTCTTTGTATATCTATTCATGTAGTTTTTCACT CGTTTTGGTACTTATATGGGTAATTATCGGTATTTATATTCGAGATGCAT ATCGGTGTATTGGAGTATGATATTTATCAGTATCGACCCCGCCCCCCCCC GTGTGTGCGAACAGGAGAAGCTTGAGGAGTTCATTGGCGCGGCAAACTCC GGGGATAACTGCCACCTCGTGACCATCCCGGCAGGCGTTCTTCCCTCCGA CGTCCTCATCTCCTCGCCCATCGTCAGCGAAGGCGGCGGGGGCGGCGGGG GCGGGGGCGGAGGAGGCGGTGGCCTTGCCGCTGGGGGAGGCGGGGAGTTC GGCGGCGCCGCAGACTTTGGAGGTAGGAGAGAGAAAGAGAGAGAGAGAGA GAGAGAGAGAGTTGGGTTCGTCGTCGTAAGTAATAAATAAAGAATGGTTG CACGACCTTGCAACAAGCAACGTGGTACTATCTACTGTACATTTTTTTGC AGGGGTGGATCCCAGTGTGGACCCCGGGGTCGCCATGACCCTGGCGAGCC TTCGCGTTGTTGAAACAAAAAAACGGTTGCACGACCTTATAAATACAAAA CGTGGTACTACTTGTACTTTTTTTTTTGCAGGGGTGGATCCCAGCATGGA CCCAGAGCTCGCGATGGCCCTGCGAGTCTCGATGGAGGAGGAGAGGGCGA GACAGGAGGCCGCTTCCAAGGCAACGGCCGAGCAGGAAGGGGCGGCAGCC ACAGACGCGGCCCCGCCGGTGGAGGGAGAACCAGCTGCTGCTGCTGCTGC TACTGCTGCTGCAGCGGGCGGCTCTGGCGAGGAAGCGGCGAGGTCTACGG AGGAGGGGAAGGGGGCGGAGAGCGGTGACGCTGCGGGGGCGACCAACGCT ATGCAGGTT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12457:531..3739-

>mRNA_E-fasciculatus_F_contig12457.1888.1 ID=mRNA_E-fasciculatus_F_contig12457.1888.1|Name=mRNA_E-fasciculatus_F_contig12457.1888.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1866bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12457:531..3739- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTGCGCGCTCTTTTCCTCAGCCTCGACAACTCTGAGTGGATGAGAAACGG
AGACTACATCCCCACCCGGATGGAGGCCCAGCACGACGCGGCCAACCTTC
TCTGCGGCAGCAAGACCAACTCCAACCCGGAGAGCACGTTGCGCGCTCTT
TTCCTCAGCCTCGACAACTCTGAGTGGATGAGAAACGGAGACTACATCCC
CACCCGGATGGAGGCCCAGCACGACGCGGCCAACCTTCTCTGCGGCAGCA
AGACCAACTCCAACCCGGAGAGCACGGTCGGCGTTCTCACCATGGCCGGG
AAGGGCCCCGAGCTCCTCGTTAGCCCCACCGACGACATGGGCAAGATCCT
CTCCTCCCTCCATGGCGTGTCCGTCCACGGCAAGACCAACTTCGCGGCGG
GCATCCAGATCGCCCAGCTCGCCCTCAAGCACCGTCGGAACAAGCACGGG
GGGCAGAGGATCATCATATTCGTCTCGTCTCCCATCGAGGACGAGGTCGG
CGTTCTCACCATGGCCGGGAAGGGCCCCGAGCTCCTCGTTAGCCCCACCG
ACGACATGGGCAAGATCCTCTCCTCCCTCCATGGCGTGTCCGTCCACGGC
AAGACCAACTTCGCGGCGGGCATCCAGATCGCCCAGCTCGCCCTCAAGCA
CCGTCGGAACAAGCACGGGGGGCAGAGGATCATCATATTCGTCTCGTCTC
CCATCGAGGACGAGACGAAGACGCTGGTGAAGGTGGGAAAGATGCTCAAG
AAGAACAACGTGGCGGCGGATGTTGTTTCCATGGGGGAGACCGACGACAA
CCAGACGAAGACGCTGGTGAAGGTGGGAAAGATGCTCAAGAAGAACAACG
TGGCGGCGGATGTTGTTTCCATGGGGGAGACCGACGACAACCAGGAGAAG
CTTGAGGAGTTCATTGGCGCGGCAAACTCCGGGGATAACTGCCACCTCGT
GACCATCCCGGCAGGCGTTCTTCCCTCCGACGTCCTCATCTCCTCGCCCA
TCGTCAGCGAAGGCGGCGGGGGCGGCGGGGGCGGGGGCGGAGGAGGCGGT
GGCCTTGCCGCTGGGGGAGGCGGGGAGTTCGGCGGCGCCGCAGACTTTGG
AGGAGAAGCTTGAGGAGTTCATTGGCGCGGCAAACTCCGGGGATAACTGC
CACCTCGTGACCATCCCGGCAGGCGTTCTTCCCTCCGACGTCCTCATCTC
CTCGCCCATCGTCAGCGAAGGCGGCGGGGGCGGCGGGGGCGGGGGCGGAG
GAGGCGGTGGCCTTGCCGCTGGGGGAGGCGGGGAGTTCGGCGGCGCCGCA
GACTTTGGAGGGGTGGATCCCAGCATGGACCCAGAGCTCGCGATGGCCCT
GCGAGTCTCGATGGAGGAGGAGAGGGCGAGACAGGAGGCCGCTTCCAAGG
CAACGGCCGAGCAGGAAGGGGCGGCAGCCACAGACGCGGCCCCGCCGGTG
GAGGGAGAACCAGCTGCTGCTGCTGCTGCTACTGCTGCTGCAGCGGGCGG
CTCTGGCGAGGAAGCGGCGAGGTCTACGGAGGAGGGGAAGGGGGCGGAGA
GCGGTGACGCTGCGGGGGCGACCAACGCTATGCAGGTTGGGTGGATCCCA
GCATGGACCCAGAGCTCGCGATGGCCCTGCGAGTCTCGATGGAGGAGGAG
AGGGCGAGACAGGAGGCCGCTTCCAAGGCAACGGCCGAGCAGGAAGGGGC
GGCAGCCACAGACGCGGCCCCGCCGGTGGAGGGAGAACCAGCTGCTGCTG
CTGCTGCTACTGCTGCTGCAGCGGGCGGCTCTGGCGAGGAAGCGGCGAGG
TCTACGGAGGAGGGGAAGGGGGCGGAGAGCGGTGACGCTGCGGGGGCGAC
CAACGCTATGCAGGTT
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