mRNA_E-fasciculatus_F_contig1245.1881.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1245.1881.1
Unique NamemRNA_E-fasciculatus_F_contig1245.1881.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: D7G567_ECTSI (Glyco_trans_2-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G567_ECTSI)

HSP 1 Score: 809 bits (2089), Expect = 1.130e-287
Identity = 442/481 (91.89%), Postives = 446/481 (92.72%), Query Frame = 1
Query:    1 MPNRKGRHHAAAPSSLPTESAXXXXXXXXXXXXXXXXXRGRRARNDGSEVPPSYSSRRGSGDSAGARDGGHRRPGSNLXXXXXXXXXGNAAVTNQNGERVDVGRNGQGXXXXXXS-GRRVVHRVGMDCLSPINVSRGEAASSGVITPLHSGKSGLSCTTSVGPAQYMREEMLTPSPPPNWGQHFATTIEREPGEMEFKDEEERARAAMTDGEADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRPRKGLFKKASNLNYGLNVAIRVEEIMAESGGQVTDPVEALQLVSGEFNDEFFAGGDVRMGDIVLLVDSDTRVPEDCLSKSSGK 1440
            MPNRKGRH AAAPSSLPTESA                 RGRRARNDGS+VP SYSSRRGSGDSAGARDG         XXXXXXXXX NAAVTNQNGERVDVGRNGQGXXXXXX  GRRVVHRVGMDCLSPINVSR E ASSGVITPLHSGKSGLSCTTS+GPAQYMREEMLTPSPPPNWGQHFATT EREPGEMEFKDEEERARAAMTD EADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRPRKGLFKKASNLNYGLNVAIRVEEIMAESGGQVTDPVEALQLVSGEFNDEFFAGGDVR+GDIVLLVDSDTRVPEDCLSKSSG+
Sbjct:    1 MPNRKGRHTAAAPSSLPTESALPPPPAYTQPAPGGGGSRGRRARNDGSDVP-SYSSRRGSGDSAGARDGXXXXXXXXXXXXXXXXXXXNAAVTNQNGERVDVGRNGQGXXXXXXXXGRRVVHRVGMDCLSPINVSRAEGASSGVITPLHSGKSGLSCTTSIGPAQYMREEMLTPSPPPNWGQHFATTTEREPGEMEFKDEEERARAAMTDREADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRPRKGLFKKASNLNYGLNVAIRVEEIMAESGGQVTDPVEALQLVSGEFNDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGE 480          
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: A0A6H5LE92_9PHAE (Glyco_trans_2-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LE92_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 4.190e-66
Identity = 133/258 (51.55%), Postives = 173/258 (67.05%), Query Frame = 1
Query:  670 VRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYV-FMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRPRKGLFKKASNLNYGLNVAIRVEEIMAESGGQVTDPVEALQLVSGEFNDEFFAGGDVRMGDIVLLVDSDTRVPEDCLSKSSGK 1440
            VR TR INY T T+  V I        + +V   L DGY+ R V  + +LPA V FMLF + + + Q + ALGP+AHMQ NS++FS+    R    P +TIQMPVYKE+L   ILPSI S+  A+ HY+K GG A ++INDDGLQ++ EK+R ARV  Y+ H ++YVARPP  ++ RKGLFKKASN+NY L+V+ R   +M E G  ++DP  AL +V      EF AGGD+ MG I+LLVDSDTRVPEDCL+K  G+
Sbjct:  195 VRVTRRINYFTQTIVLVFILSTSALFVWKMVGLCLDDGYWGRMVN-VGFLPAVVIFMLFIVHFGITQIVCALGPVAHMQTNSQFFSALAPARALTYPDITIQMPVYKESLEAVILPSIVSLEAAMSHYRKAGGFAKIFINDDGLQLLDEKDREARVSVYRAHRIAYVARPPHGVKIRKGLFKKASNMNYCLDVSDRTMGVMEEQG--LSDPALALSMVQEAAQGEFLAGGDLTMGSIILLVDSDTRVPEDCLTKVVGE 449          
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: A0A4S2N0D6_9PEZI (Glyco_trans_2-like domain-containing protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N0D6_9PEZI)

HSP 1 Score: 190 bits (483), Expect = 5.690e-49
Identity = 114/298 (38.26%), Postives = 172/298 (57.72%), Query Frame = 1
Query:  583 EFKDEEERARAAMTDGEADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR---PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARP-------PASIRPRKGLFKKASNLNYGLNVAIRVEEIMAE-------SGGQVTDPVEALQLVSGEFNDEFFAGGDVRMGDIVLLVDSDTRVPEDCL 1422
            + +++E +  A   +   D+E GD  + E R T  +N I VT T +L+F +L      I  +T  DG +LR + F+   P  +F  LF    ++       GP + +  NSKY+S+KP  R      +P VTIQ PVYKE L   I P+++S+  A+  Y+  GG AN++INDDGLQ++S +ER+AR+  Y+ H + +VARP         SI  R+G FKKASN+N+GL ++ +VEE++A+       +  Q  D  +A      E +   +A G++R+GD +LL+DSDTRVP DCL
Sbjct:  241 DVENKESKMLAVEIEEIVDVETGDVTYRERRPTNLLNTILVTFTIILVFCMLAAGYRQIAIETAVDGNHLR-ILFVLLTPVQIFFTLFFAQVIVGCLAQCFGPTSQLTTNSKYYSAKPPARLKMNGALPHVTIQCPVYKEGLASVIEPTVKSIKKAINTYELQGGTANIFINDDGLQLLSPEERDARIEFYQNHNIGWVARPGHNSKLKDGSIFQRRGKFKKASNMNFGLMISCKVEEMLAQIERDDSWTQAQEADAYQAALTEILEADGRAWADGNIRIGDYILLIDSDTRVPSDCL 537          
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: A0A8J9WQ03_9CHLO (Probable cellulase/esterase CelE at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WQ03_9CHLO)

HSP 1 Score: 186 bits (473), Expect = 2.340e-47
Identity = 116/283 (40.99%), Postives = 171/283 (60.42%), Query Frame = 1
Query:  607 ARAAMTDGEADLELG-DSGWCE---VRKTRYINYITVTLTHVLIFLVLGTR-GYTIVRDTLSDGYYLRCVAFLYYLPAY-VFMLFSIDYLLAQFIYALGPIAHMQENSKYFSS-KPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIR--PRKGLFKKASNLNYGLNVAIRVEEIMAESGGQVTDPVEALQLVSGEFNDE--FFAGGDVRMGDIVLLVDSDTRVPEDCL 1422
            A  + +D   D+E G     CE   +R  R+     V +   +I  VLG+  GY I RD + DG + +  A + + P   V  +F +  ++   I  LGPIAH+++NS+ +S+ KP      +PRVT+QMPVY E     I PSI S   A+  Y+  GG A++++NDDGLQ++++++R  R+  Y+ H + YVARPP       R+G FKKASN+NY L V+ +VE IMAE+G    + ++A++L +     E  F AGGDVRMG+ +LLVDSDTRVP+DC+
Sbjct:  529 AAVSCSDSSFDVEEGLGEELCEAEALRPLRWNQPAVVIIACCIIMGVLGSGVGYAI-RDAVEDGSWWKVAARVAFTPVISVLAMFGVIAIVCCIIVTLGPIAHVEQNSRTYSAVKPLRWRGKLPRVTVQMPVYLEGFEFVIKPSIFSYEAAIAAYRAEGGSASIFVNDDGLQLLNDEDREERIEFYRAHDIGYVARPPHGRAGFERRGRFKKASNMNYCLEVSRQVENIMAETGVDQYEALQAVRLATQAATPEHAFLAGGDVRMGEFILLVDSDTRVPQDCM 810          
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: I0Z2J3_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z2J3_COCSC)

HSP 1 Score: 185 bits (469), Expect = 8.440e-47
Identity = 119/304 (39.14%), Postives = 177/304 (58.22%), Query Frame = 1
Query:  550 ATTIEREPGEMEFKDEEERARAAMTDGEADLELGDSGWC-EVRKTRYINYITVTLTHVLIFLVLGTRGYTI---VRDTLSDGYYLRCVAFLYYLPAY-VFMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR-PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRP--RKGLFKKASNLNYGLNVAIRVEEIMAESGGQVTDPVEALQLVSGEF-----NDEFFAGGDVRMGDIVLLVDSDTRVPEDCL 1422
            A  +E +  +++ K  E+ + A+ +D   D+E G  G   E    R + +    +  +   ++LG  G  I   +R+ + DG + +  A + ++P   V  +F +  ++   I  LGPIAH++ NSK +S+   PR    +PRVT+QMPVY E     I PSI S+  A+  Y+  GG A++++NDDGLQ++S ++R  R   Y+ H + YVARPP       R+G FKKASN+NY L V+ +VE++MAESG    D  EALQ V  E      +  F AGGDVR+GD +LLVDSDTRVP+ C+
Sbjct:  227 AQEMEADCAKLKGKASEDGSAASCSDYSFDIEEGLGGDAPETEAERPVRWNQPAVVIIACCIILGVLGSGIGYAIREAVEDGSWWKVAARIAFMPLISVLAMFGVIAIVCCIIVTLGPIAHVERNSKTYSAVKPPRWRGQLPRVTVQMPVYLEGFDFVIKPSICSLEAAIAAYRAEGGSASIFVNDDGLQLLSNEDREERREFYRAHDIGYVARPPHGQARFMRRGRFKKASNMNYCLEVSRQVEDLMAESG---VDQYEALQAVRLETQVATPDQAFLAGGDVRIGDFILLVDSDTRVPQHCM 527          
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: A0A5J5EQ52_9PEZI (Glycosyl transferase family group 2-domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5EQ52_9PEZI)

HSP 1 Score: 183 bits (465), Expect = 1.330e-46
Identity = 118/291 (40.55%), Postives = 166/291 (57.04%), Query Frame = 1
Query:  592 DEEERARAAMTDGEA--DLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR--PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRP--RKGLFKKASNLNYGLNVAIRVEEIMAE----SGGQVTDPVEALQLVSGEFNDE---FFAGGDVRMGDIVLLVDSDTRVPEDCL 1422
            DE + AR A    E   D E G+ G+ E R T   N I V+ T +L+  +LG     I  +T  DG Y+R +AF+   P  VF  LF    ++       GP++ +  NSKY+S+KP PR     +P VTIQ PVYKE L   I P+++S+  A+  Y+  GG AN+++NDDGLQ+IS +ER AR+  Y  H + +VARP        R+G FKKASN+N+ L ++ +VEE +AE             EA +    E  +E    +A G++R+GD +LL+DSDTRVP DCL
Sbjct:  223 DEAKEARLAQASVEEIIDEETGELGYRERRPTMLWNTILVSFTIMLVLCMLGAGYRQIAIETAVDGNYVR-MAFIALTPVQVFFTLFFAQVIIGCLAQCFGPVSQLTINSKYYSAKPPPRIRTLTLPHVTIQCPVYKEGLEAVIAPTVRSIKQAISTYELQGGTANIFMNDDGLQLISPEERQARIDFYTDHNIGWVARPKHGENGFLRRGKFKKASNMNFALMISCKVEEKLAEIERDEAWTQAHEAEAYERCLKEVLEEDGRAWADGNIRVGDYILLIDSDTRVPSDCL 512          
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: A0A178Z612_9EURO (Glyco_trans_2-like domain-containing protein n=1 Tax=Fonsecaea erecta TaxID=1367422 RepID=A0A178Z612_9EURO)

HSP 1 Score: 183 bits (464), Expect = 1.760e-46
Identity = 119/294 (40.48%), Postives = 168/294 (57.14%), Query Frame = 1
Query:  577 EMEFKDEEERARAAMTDGEADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR--PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRP--RKGLFKKASNLNYGLNVAIRVEEIMAE----SGGQVTDPVEALQLVSGEFNDEF---FAGGDVRMGDIVLLVDSDTRVPEDCL 1422
            E E  +E+ RA  A  D E+  EL      + R T  +N I V  T +++  +LG    ++  +   DG Y+R +AF+  +P  +F  LF    ++      LGPI  MQ NSKYFS+K  PR    ++P VTIQ PVYKE L   I P+++S+  A+  Y+  GG AN++INDDGLQ+I E++R AR+  Y+ H + + ARP        RKG FKKASN+NYGL ++ +VE+ +      S     D  EA      E  DE    +A G++R+GD +LL+DSDTRVP DCL
Sbjct:  218 EEEVTNEKNRASIASVDSESG-ELPP----QERPTNLMNTILVAFTLIIVVTLLGLACRSLATEIAVDGSYIR-LAFVSLVPVQIFFTLFFAQVIVGCVAQCLGPIQQMQLNSKYFSAKCSPRLRTQILPHVTIQCPVYKEGLASVIAPTVKSIKQAISTYELQGGTANMFINDDGLQLIDEEQRKARIDFYQDHNIGWTARPKHGSEGFVRKGKFKKASNMNYGLMLSCKVEDKLQRYHRNSAWTPNDESEAYDECLREVLDETPRAWADGNIRIGDYILLIDSDTRVPVDCL 505          
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: U1HPR0_ENDPU (Glyco_trans_2-like domain-containing protein n=2 Tax=Endocarpon pusillum TaxID=364733 RepID=U1HPR0_ENDPU)

HSP 1 Score: 183 bits (464), Expect = 1.820e-46
Identity = 115/295 (38.98%), Postives = 169/295 (57.29%), Query Frame = 1
Query:  577 EMEFKDEEERARAAMTDGEADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR--PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRP--RKGLFKKASNLNYGLNVAIRVEEIMA-----ESGGQVTDPVEALQLVSGEF---NDEFFAGGDVRMGDIVLLVDSDTRVPEDCL 1422
            + E +D  E+    +T+ E D E G+    E R T  +N I V  T V++ ++LG     +  +T+ D  YLR +AF+   P  VF  LF    ++      +GP+  MQ NSKY+S+K  PR     +P +T+Q PVYKE L   I P+++S+  A+  Y+  GG AN++INDDGLQ++ E+ER AR+  Y  H + + +RP   +    R+G FKKASN+NYGL ++  VEE +A     E   Q  D  +A +    E    N   +A G++R+GD +LL+DSDTRVP DCL
Sbjct:  223 QTEEEDTNEKKTPRVTEFEVDEESGEI-IPEKRPTNLMNTILVAFTLVIVVVMLGAGFRAVAIETIVDKNYLR-MAFVLLTPVQVFFTLFFAQVIVGCIAQCIGPVRQMQLNSKYYSAKCSPRLQNRTLPHITVQCPVYKEGLASVIAPTVKSIKQAISTYELQGGSANMFINDDGLQLLGEEERQARIEFYVDHSIGWTSRPKHGVDGFLRRGKFKKASNMNYGLMLSCNVEEKLARYQRGEDWSQA-DEAQAYETCLKEVLEENGRAWADGNIRIGDYILLIDSDTRVPSDCL 514          
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: H6BNT3_EXODN (Glyco_trans_2-like domain-containing protein n=1 Tax=Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) TaxID=858893 RepID=H6BNT3_EXODN)

HSP 1 Score: 182 bits (461), Expect = 3.690e-46
Identity = 120/311 (38.59%), Postives = 174/311 (55.95%), Query Frame = 1
Query:  550 ATTIERE-------PGEMEFKDEEERARAAMTDGEADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAV--MPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRP--RKGLFKKASNLNYGLNVAIRVEEIMAE--SGGQVTDPVEA------LQLVSGEFNDEFFAGGDVRMGDIVLLVDSDTRVPEDCL 1422
            ATTIE +        GE    DE +  +        D E G++   E R T  +N I V  T +++ ++LG    ++  +   DG Y+R +AFL  +P  +F  LF    ++      +GP+  MQ NSKY+S+K  PR     +P VT+Q PVYKE L   I+P+++S+  A+  Y+  GG AN+ INDDGLQ I E+ER AR+  Y+ H + + ARPP +     R+G FKKASN+NYGL ++ +VEE +     G   T   E+      L+ V  E     +A G++R+GD +LL+DSDTRVP DCL
Sbjct:  161 ATTIESQLMELVWHTGEARDDDEVQNEKDGGIQVTVDPESGET-MSEHRSTNLMNTILVAFTLIIVVVLLGLAFRSLATEIAVDGGYIR-LAFLLLVPVQIFFTLFFAQVVVGCIAQCIGPVRQMQMNSKYYSAKCSPRLRTPELPHVTVQCPVYKEGLASVIMPTVKSIKQAISTYELQGGTANMLINDDGLQAIDEEERKARIEFYQDHNIGWTARPPHNSEGFIRRGKFKKASNMNYGLMLSCKVEEKLQHIHRGPNWTQNDESQAYEACLEQVLAE-TPRAWADGNIRVGDYILLIDSDTRVPADCL 468          
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Match: G0S0Q5_CHATD (Glyco_trans_2-like domain-containing protein n=1 Tax=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) TaxID=759272 RepID=G0S0Q5_CHATD)

HSP 1 Score: 182 bits (461), Expect = 4.500e-46
Identity = 118/289 (40.83%), Postives = 168/289 (58.13%), Query Frame = 1
Query:  592 DEEERARAAMTDGEADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR--PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIR--PRKGLFKKASNLNYGLNVAIRVEEIMA--ESGGQVT--DPVEALQLVSGEFNDE---FFAGGDVRMGDIVLLVDSDTRVPEDCL 1422
            DEE+       + E D E G+    E R    +N   VTLT +L+ + +G  G  +  +   DG Y+R +A L   P  +F  LF    ++       GPI  +  NSK++S+KP PR   AV+P VTIQ PVYKE L   I P+++S+  A+  Y+  GG ANL+INDDGLQ+ISE+ER AR+  Y  H + +VARP        R+G FKKASN+N+ L ++ +VE+ +A  E G + T  D  +A +    E  +E    +A G++R+GD +LL+DSDTRVP DCL
Sbjct:  223 DEEDEKATGRGEPEIDEESGEIK-PEKRPVHLMNTYLVTLTLILVTVSIGAAGRQLAIEVSVDGNYVR-LALLALAPVQIFFTLFFCQVIVGCLAQIFGPIRQLTINSKFYSAKPPPRLRSAVLPHVTIQCPVYKEGLQTVIAPTVKSIKQAMSTYELQGGSANLFINDDGLQLISEEERRARIEFYADHSIGWVARPKDGENGFKRRGKFKKASNMNFALMISCKVEDKLAQIERGPEWTQHDEAQAYEKALKEVLEEDGRAWADGNIRIGDYILLIDSDTRVPADCL 509          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1245.1881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G567_ECTSI1.130e-28791.89Glyco_trans_2-like domain-containing protein n=2 T... [more]
A0A6H5LE92_9PHAE4.190e-6651.55Glyco_trans_2-like domain-containing protein n=2 T... [more]
A0A4S2N0D6_9PEZI5.690e-4938.26Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A8J9WQ03_9CHLO2.340e-4740.99Probable cellulase/esterase CelE at C-terminar hal... [more]
I0Z2J3_COCSC8.440e-4739.14Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]
A0A5J5EQ52_9PEZI1.330e-4640.55Glycosyl transferase family group 2-domain-contain... [more]
A0A178Z612_9EURO1.760e-4640.48Glyco_trans_2-like domain-containing protein n=1 T... [more]
U1HPR0_ENDPU1.820e-4638.98Glyco_trans_2-like domain-containing protein n=2 T... [more]
H6BNT3_EXODN3.690e-4638.59Glyco_trans_2-like domain-containing protein n=1 T... [more]
G0S0Q5_CHATD4.500e-4640.83Glyco_trans_2-like domain-containing protein n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1245contigE-fasciculatus_F_contig1245:8818..16663 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score815.1
Seed ortholog evalue1.8e-233
Seed eggNOG ortholog2880.D7G567
EggNOG free text desc.Glycosyl transferase family group 2
EggNOG OGs28KUH@1,2QTAT@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-14_006400.1
Exons8
Model size1452
Cds size1452
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1245.1881.1prot_E-fasciculatus_F_contig1245.1881.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1245 8818..16663 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927750.619836-CDS-E-fasciculatus_F_contig1245:8817..92441622927750.619836-CDS-E-fasciculatus_F_contig1245:8817..9244Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 8818..9244 +
1695995679.2514184-CDS-E-fasciculatus_F_contig1245:8817..92441695995679.2514184-CDS-E-fasciculatus_F_contig1245:8817..9244Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 8818..9244 +
1622927750.697059-CDS-E-fasciculatus_F_contig1245:11784..119541622927750.697059-CDS-E-fasciculatus_F_contig1245:11784..11954Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 11785..11954 +
1695995679.2621639-CDS-E-fasciculatus_F_contig1245:11784..119541695995679.2621639-CDS-E-fasciculatus_F_contig1245:11784..11954Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 11785..11954 +
1622927751.044827-CDS-E-fasciculatus_F_contig1245:13048..132331622927751.044827-CDS-E-fasciculatus_F_contig1245:13048..13233Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 13049..13233 +
1695995679.2724533-CDS-E-fasciculatus_F_contig1245:13048..132331695995679.2724533-CDS-E-fasciculatus_F_contig1245:13048..13233Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 13049..13233 +
1622927751.0563886-CDS-E-fasciculatus_F_contig1245:13942..140271622927751.0563886-CDS-E-fasciculatus_F_contig1245:13942..14027Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 13943..14027 +
1695995679.284496-CDS-E-fasciculatus_F_contig1245:13942..140271695995679.284496-CDS-E-fasciculatus_F_contig1245:13942..14027Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 13943..14027 +
1622927751.0683618-CDS-E-fasciculatus_F_contig1245:14481..145921622927751.0683618-CDS-E-fasciculatus_F_contig1245:14481..14592Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 14482..14592 +
1695995679.2960794-CDS-E-fasciculatus_F_contig1245:14481..145921695995679.2960794-CDS-E-fasciculatus_F_contig1245:14481..14592Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 14482..14592 +
1622927751.0819635-CDS-E-fasciculatus_F_contig1245:14989..151121622927751.0819635-CDS-E-fasciculatus_F_contig1245:14989..15112Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 14990..15112 +
1695995679.3082654-CDS-E-fasciculatus_F_contig1245:14989..151121695995679.3082654-CDS-E-fasciculatus_F_contig1245:14989..15112Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 14990..15112 +
1622927751.0971787-CDS-E-fasciculatus_F_contig1245:15557..157611622927751.0971787-CDS-E-fasciculatus_F_contig1245:15557..15761Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 15558..15761 +
1695995679.3185081-CDS-E-fasciculatus_F_contig1245:15557..157611695995679.3185081-CDS-E-fasciculatus_F_contig1245:15557..15761Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 15558..15761 +
1622927751.1119127-CDS-E-fasciculatus_F_contig1245:16516..166631622927751.1119127-CDS-E-fasciculatus_F_contig1245:16516..16663Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 16517..16663 +
1695995679.3278017-CDS-E-fasciculatus_F_contig1245:16516..166631695995679.3278017-CDS-E-fasciculatus_F_contig1245:16516..16663Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1245 16517..16663 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1245.1881.1

>prot_E-fasciculatus_F_contig1245.1881.1 ID=prot_E-fasciculatus_F_contig1245.1881.1|Name=mRNA_E-fasciculatus_F_contig1245.1881.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=484bp
MPNRKGRHHAAAPSSLPTESALPPPPAYAQPAAGGGGSRGRRARNDGSEV
PPSYSSRRGSGDSAGARDGGHRRPGSNLTGGSHRSGGGNAAVTNQNGERV
DVGRNGQGGGGGSSSGRRVVHRVGMDCLSPINVSRGEAASSGVITPLHSG
KSGLSCTTSVGPAQYMREEMLTPSPPPNWGQHFATTIEREPGEMEFKDEE
ERARAAMTDGEADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRG
YTIVRDTLSDGYYLRCVAFLYYLPAYVFMLFSIDYLLAQFIYALGPIAHM
QENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHY
KKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRPRK
GLFKKASNLNYGLNVAIRVEEIMAESGGQVTDPVEALQLVSGEFNDEFFA
GGDVRMGDIVLLVDSDTRVPEDCLSKSSGKSSS*
back to top

mRNA from alignment at E-fasciculatus_F_contig1245:8818..16663+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1245.1881.1 ID=mRNA_E-fasciculatus_F_contig1245.1881.1|Name=mRNA_E-fasciculatus_F_contig1245.1881.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7846bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1245:8818..16663+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCCAACCGCAAAGGACGGCACCATGCCGCAGCGCCGTCTTCTCTTCC CACCGAGAGCGCACTCCCGCCTCCACCAGCCTACGCCCAGCCTGCCGCGG GCGGCGGCGGGAGTCGGGGGCGACGAGCCCGGAACGATGGGTCGGAGGTG CCGCCGAGCTACAGCAGTCGAAGAGGGAGTGGCGACAGCGCCGGGGCGAG AGATGGGGGGCATAGAAGACCAGGGTCGAATCTGACCGGAGGCTCTCATC GCAGTGGTGGCGGCAATGCCGCTGTGACGAACCAAAACGGAGAGAGGGTA GATGTGGGTCGAAATGGGCAGGGCGGCGGCGGCGGCAGCAGCAGCGGCAG GCGGGTCGTGCATCGAGTGGGCATGGATTGCCTGAGCCCGATCAACGTCT CGAGGGGAGAGGCGGCTTCCAGTGGCGGTGAGCTATTGTACGCATAGATA GAGAAGAGGTAATCCAAAGACAGGACACACGCACAGACAGACAAAGAAGT TTTTTTTGCCCCGAGTAGTCGCTCTTTGTAGGCACCGCACTCAGTGATGA CCGTTCAGCGGCTACTGGAAACGAACCCGTTCGCTTGCATTCGTACCTGC TGCCTCTGCATCTAGCTATTTAGTCTACAGCAGTACTCCAACAAAACTCG ACAGTGCTCATTCATCGTTCCTCGGTCTGCTTGCACCTCCCCTGCGTTAC CAAACGCAGTTTGCTGCCACGGAATTGCTTCGAGATCATCCTCTCTCTCG CCGGATCCCCTCTGTAGCTGAATTCGTTCTGTTTCCAACCAAATGTTCCT TATTCCCAATTTCATCATGATGCTGTCAAAGCCAGCCACCCGCTGCCGTC CACCGCTTCCTTGTCTGCTCTACTGCTGTCAGTCATGTCGGCTCCTGCTG TTTGTTTGCGGAAATGGAGGATGCCCCAGCTTTTCTCTCCTACCATACCC TGAGTTGCCTCACCGCCTTCTGTGTGCGGCCATGTACCTTGTACTACATC GATTGCCCCGTGTAGGTTTCCGTTATAGTACCTCCCGCGCTCGAACCAAA AGAATCCAGTAAGAATCCAGTGCGTACTTGTATGCATACATGACTTGTAG GCACACCTTTTTTTTTTTTCTATCGCTTTTCCCTTTGTTGGGTCAGTTTC AAAATTGGCACATCCATCTCATCTGCCTCCTGTTCGGTGTTGCGGACTCG GTCTACAACATCTCTCCCCCGTACATACTTGTACTCTGCCGAAACACAAG TGATTGTACAAATGATTGTTTCTCTTGCGCTTGTGAGATCGGGTTGAACA TGGTCCCACCTCGATCTATGGGTTACTACAGCAGCAGTACCTTTGACGGG AAAATGTGAATCGATCACTTCTATTCTCTTAGCGACTCTACCGGCCGGCT GACGTCCCTGCTTGAGTTGTGTCAACTATTTACTGTCAAAGGAAGCGGAA CACCCCGGGTCTCTCTTTCTCAGTCTGGTGCGTACCCCACAGACTTACAC GCGGGCAGCAGCAAGCAGCCAGAGCACTTACGGGTGACGCCAAAAAAGGT TCCACGCCAGCCCTTGATTTGTGTTGTGATGATCGAACCTTGGACGTAAA CAACGTACATCGATGTAACATACATACGTTGCATACACCAAACGGGTCTT GATCCAGCCCCTTGGCCAGGTTGAGTTTTAGAAAATATACCTATGAAGAA TACCAGCTCTGATTTTGACAATTGTTGAAAATATTCGTGTCCCTGAAAGA CTACCCGCTCGAGATCATACCCCTTGTCGAAGGGATGTGTTCTTGCAGCC AGTCAGTGGGAAAAGGAAACTGCTGGATGCTGGACGTATCTGAGTCTGTT CAGCCCTGGTGTACATGGAAGGATCGTTGATGCCAGCTGGCACGATTCAC AACACCACCTACCAAGCTAACGTGCCCGTGCAGTTTTCGGCTCTGGATCG ACAACGAAAATGACTCTTGACTCTTTGTTCATTCATGTCCCCTGGCGGCG GACACTCGGACGCACAGACAAAACACACCGAGTACGAAGAGCCACCCAAG TCGCTCGGATTCAGCCTACGACATGCATTTGATTTGATGGGTTATTTCCC CTTGTTTGTTGTTGTTGTTCGGTGACTGGCCATCGGCCGCCGCACTCATC ACGCACTGCGACGTACCGTACGCGTGGTCTAGATTTGATTTCGGTTTTGG TGTTGGTGTCGTTTTCGTGGGAAGAATTAATTTGGATTTTGTTTGACGTT GGAAGAAGGAAAGAGAATCCCGAATGAGGCGTCGCACACAAATAGCTGCA CAACTCACCTCTGAACTTGTTTCTCGACAGAGAGAAGAGAAAGATGGTAC CGCTATTTGTATCTGTGCATACCAGGCGCGAAATGGATCCTGACCACATC CGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACACGCATCTCGCC GAGTTAAAGGAGCCTAAGAGTCACGCTCGTTAAGTCCTTCCTGATGCCCC TCACTTCCCCGCCGAGCCAAGCAAGGCAATCTTAATCTTGACATGGCCGC GCTCATGGTTACTACACGTTCCCCGCGAGACGAGCAGACAGCAGCAGTGA CTCACACACTTTTTCCTCTCTCTGCGTACTGCGGTACCTGTCTCCTTGAA AACACAGCAGCTTGATTTCTCCATGGAGCATTTTCTAAAGTGGAAGTACC GCGCACGCATGTCCCTTGCTGGGTGTACTTCATGAACACATCAGCAGGGG GGATTTACTTTTTTGGGAATCGAGTGCTTGCGCTCCCGTCCCGATGATGC CCTTCTACCTCTCGCCCCCATCCTATGCGGCATGCCCCCGACACAACCGA TCGATACTGCAGCAGCAGCATGCCGGTGGTAGGTGTTAAGCCTGCCCGTG TTTCGTCTCATCGACTTATTCGACGCCTTGTCAGCTCAATATCCCCGCAT CGTGCTCAAAAATGCAGTGATTACGCCGCTTCACAGCGGGAAGAGCGGGC TGTCGTGCACCACGTCCGTCGGGCCGGCGCAGTACATGCGGGAGGAGATG CTCACGCCGTCCCCGCCGCCCAACTGGGGACAGCACTTTGCGACGACGAT CGAGCGCGAGCCGGGGGAAATGGAGTTTAAAGACGAGGTAGGCTGTGAAT ACGTACGTCCCTTGCACCTCACACACAAAAAGGGTGTTTGACTATGTTGC ACGCGAGCATCGAAGGACGGTCGGCGGTGGTGATGATCAGACGCCTACCC TACGCCTTTTGTTGAAACGTTTCGTGTTCCATCGACCGTTTCAAGTTCTA TTCCGTACCAGGTTTCGAACAACCTTTGCAGGCTTTTCGCGCTCGCGAAC GGCTGCTTGCCGTGTGCATACCCTCGCGGAATATTTTTTCGTTCGATCTG TTAATTTTTGCATCATATATATATACATTTTTTTTTTCCTAATATAACAC AACGAGTCCATCTCTATCAGAGAAAAGAGTCAAAGACAGATTAGCAACGG AATCATAGGGTCAGAGATAACTACCTGTATGTCTACGATTTCCCAGACAG CATATAGGGACATCTCCCCTGCGGTTAACAGGCTCAATTTTGTTCCGTGT AGGCCGCTGCCCGGCGGTGCGAGGGATGTATAGCATAGCAGGGGCTGAGA CACTCAGGGGGCACACGCTCGCCAAACGCCCCCTGGACGTGGACATCGGG TGTGTTTGTTTTCACGTACCGGTTGGCCTGATGGAGCTTGTGCGAACGAC AAGCTGCTGTATCGTCCAATTTCGTTGTGCCCGAAATGGCGAAAATCAGC TGCTTCGTGGCTGTATCCCGGTACATAGCTGTTGTGAACGGTCTATGCAG CAGTAGATGAGCTTCCCCCCGGCTTGACACCGATGCAGAATCGCAATGCG CGGTGCCGGTGCCGGTGGCTAAGCTACGGTGGTGGCCTTGGCGAGGGGTC GACCGTCGTCTCCAACAACCCCCTATACCCGATACCCGATGCAATCCAGT GCCGCGTTCCTTCCAAGCTATTATTAGTAGACAGGCCGCAAGCACCAAAA GTAAAACATCATCCGAGAATAGTCTTGGCCAAGTCTCCACTCGCGCAACT ATCATAAGAACCATCCATGTTTTCTTCTGTGTCCATGCCAAATCGCACGC AGTAAAGTTGTAAACTTTCCGTCCATCGCTGCGAACAAACAAAAAAACGA ATGGAACGGAAAAATAACTTGGACTTTTTAGGAGGAGCGCGCGCGGGCTG CCATGACCGATGGGGAGGCTGACTTGGAGCTGGGCGATAGCGGCTGGTGC GAGGTTCGCAAGACGCGTTACATCAACTACATTACGGTGACCCTGACCCA CGTGCTCATCTTCCTCGTGCTGGGTACCCGAGGGTACACCATCGTTCGCG ACACGCTGAGCGACGGGTGAGCTACAGCAGTGGAGGTCAAGGTTTTGGAT GTGGATGCGTTTTCGTTATACTGCTGTATGCGCACGTGTTATTTTTTCTC TCTGCCTCTCTTTCGTTCTCTTCCTCATGTTTGGTGGTGGTGTTGCGGAG GGCGTGGGTAGCTCGTTTCGTCTCGCCTCGCAGGCTCTTCGCGATTTTGT CGACGGAGAGGGTACAGTAGAGTGTGGTATCCACACTCGCGCGTGAAATT GTGTGTGTTTGATTGATTGATGGACATCGACCGCGCTAACCGGCGGCTGG CCAATGAAAGAACGTCGGTGTCAGCAGTTACGCTACAAATCAATCAATGT CCCTGGAAGAGGGCCAGCCAGAATTGTAGAGGTGGGCGTCGCCCACGATG CCACTGAAACCTACCTCTCTGCAAACCCTGTGTGTTGTGTGTGTATCTTG ACGTTTAGCGTCGCTATCTGACTGACTAATGAAAAAGGCGTCTGTGTGTG TGCGTTTTTATCGTAAAGGCGGGCGCTCACTAGCTCTGACTCCATGCAAG AGCGAGGAATTGTCATTGACGTTGGCAGCGTCTCCGGGGGACTAGACGAG AAACATGCACAAGGGGTTCCGCACGAAGCTATTGCCCCCTTTGCTCGTAA CCGACACACAACATCGCCGCTCTTCCCTCCCCGCCGTGCTGGTTCTGTGG TGTTTTTGTCGCATCCCTCTCGCAGGTACTACCTTCGATGCGTGGCGTTT TTGTACTATCTTCCAGCCTACGTTTTCATGCTCTTCAGCATCGACTACCT CCTAGCACAGGTGAGCCGCAGACACCGTTTGCGTTGCTGTAGCACTACTG TAGCCCTTGCAGCCCCGGCAGTTTGTCCGCTCCATGAAGGCTACAGTACT GGCAAAAGACGGGGGTAGGGAGACTTTGCAGAGGGCGAGTGCGCCAGTTG GCAGCTTTCGACGTGAGCCATCTCTCCGGGAGACTGCGGCGGATTGTGCG AAATCTTTTTGATGGATGATGTCGTGTCGTTGCCTTGAGAACATCCTCGT TGTTGTTCCGCACGATGAGAAGAAAACAAAACCTCTTCCCTGCTCTCCCG GAGTGTTGTTGTGGGCCAATCCGGTCTCACCTGCGTGCCATCAACTGCGT CCAACAGCCCACCCTGCAGCTCGTTGCAAAGCGTTGATGGTCCCCACCGC CCGCCTCGCGTTCCCCGCTCTTGTCAATGTCGATGTCTCGCCTGTCGCTG TGCGCCGAGAACAGTTCATCTACGCGCTAGGCCCGATCGCCCACATGCAG GAGAACTCCAAGTACTTCAGCAGCAAGCCTTGCCCCCGACCGGCGGTGAT GCCGAGAGTAACCATCCAGATGCCGGTGAGCAAAGGGCGAGCGACGCGGA CACAAAGGAGATTGGTGGCCGTCACACAAGAAACAAAAGCTTTGTCCTGC TGGACACATGGTTTCGTCTATGGTTAGAGAGAGATGAGATTGGTGTGTTT TCGTTCAGAAAACAAAGGCAACGAACATGTGGATGCCACACACCGCTTAC ACGACGAGCTTGATTCGCCGAGGCACATCGAACGCACATCGAAAAGTCGC ACGTGACCATCCAAACAGCAGTGTTTCTAGGTTGTTGGTTTCTCACACTT GGGGTCCGCTATTTTGTGCGTGGCAATATTACACCCTCGAAACAGCCCCC GTTGGCGCCATGCCTCCTGGCTCAGACTCAAGCTATGCTGCACCCCTCCC CCCTTTCTAAACGTGCCCACAGGTGTACAAGGAGAACCTCGTGGAGACCA TCCTGCCGTCCATCCAGTCCGTCATGACCGCCGTGCTGCACTACAAGAAG ATGGGGGGGGAGGCGAACCTCTACATCAACGACGACGGCTTGCAGGTATG TAACAAACACGCTACGCACGTACCTCTCGAACCACACACGAAAGCGGATT CCCGATGCGATGCGATATGTGCAGCAAGCACCCTGGTACAGCAGGCTCTG GCAGGAAGAACTGCAGGCGGACGAGGATAGCTGTTCGTGTGTCGTTACGG GGCTATATTTACGGTTTCTTTTCGGCCCATATGTGTACGTGGATGCGACC TGTCAAGAGTATGAGTTAAAACGAATGCCTCGAAGACCAAGGGGGGGCGA TGTTGAGCCACGAAGCCGGCAGCGCAATATCATGATGATTTTGTTGGGCG AACGAATCGCACTCTTGTGACGACACTCATGTTGCCTTGCTGCTGTTGCT TCCGCCTCTCTTCGACTTGCTCCTGCCCGCCGCCGCCGCCGCCGCCGCCA TTTCCCCCGCGGGAACCGAATTTATCCTATCCGAGAAAAGGTCATCTCGG AGAAGGAGCGCAACGCACGCGTGTTCGCCTACAAGAGGCACGGCGTGTCG TACGTGGCGAGGCCGCCGGCGTCTATCCGCCCTAGAAAGGGTCTGTTCAA GAAGGCCTCCAACCTTAACTACGGGCTCAACGTGGCCATCAGGGTGGAGG AGATCATGGCGGAATCTGGCGGGCAGGTTACTGACCCTGTTGAGGTGGGT CGGTCGGGCATGCGGCATGGGTATGGCCTGATTTGGGGTCTGTATTGTAG GTGTTGAGTTTGGAGATGAGGGTGTGTAGGTAGAGGGGCGGGTCACGGGT ATTGGTAGAGAGAGGTGCAGCAGCATGGTGAAGGCGACGGCGATGGCGGC TGTAGACAGATGGCTTCTTGGGGCTGCTCTCCGTTGTACTTGGTATACTG TACAAGTACAAGGGCGCAGAGGAGGAGAGTGAGTCAACACAAGAGCGTGT TGACTGCCTTCTAGGCGGGAGCCGGATGAAGTTCGCTGTGATGGACATTG GTTATTGGCGCATCGGTGTTTGTTGTGAATTATTCAAGCGTGCCTCGAAG AATTGGGTTTGCTGAGGGCGCGAAGCATGGTGGTTCAAGTCTTTGGTGAA AGCGAACGGCAGCGTTCGTTCTTGTTTTAGTCTTGTAGTGTAGTGTAGTG CCTTAGTGCCGTGTGATTGTGCTGGATGGAGTGCGCACCCGCACCCGCGA CGATGTTACTTGAAGTCCTTCTTGCACCCCACCTTTGTGGTGATTGTAAT GTATTTTGATGTTAAGGTGAAGGTTAGGGCACGAAAACAAGCCCTTTCTT TTGGCTTTTGTTCAGCGCCATGTTCACGCTTGTGGTCGATACACCGTGTG CTTCTTCCTCGCTTGCGTGCAGCCTGTGGTTTCGCGCTAACTTTGGCCTG ACATCTCGCTTTTGTCATTAACAACTTTGGTCGGTCGCGCGTAATGCAGG CTCTTCAGCTCGTGAGCGGGGAGTTCAACGATGAGTTCTTCGCGGGAGGC GATGTGCGTATGGGGGACATCGTCCTCTTGGTCGACTCGGACACTCGAGT GCCAGAGGATTGCCTGTCCAAGAGCTCAGGCAAGTCGTCTTCATGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1245:8818..16663+

>mRNA_E-fasciculatus_F_contig1245.1881.1 ID=mRNA_E-fasciculatus_F_contig1245.1881.1|Name=mRNA_E-fasciculatus_F_contig1245.1881.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2904bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1245:8818..16663+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCCAACCGCAAAGGACGGCACCATGCCGCAGCGCCGTCTTCTCTTCC
CACCGAGAGCGCACTCCCGCCTCCACCAGCCTACGCCCAGCCTGCCGCGG
GCGGCGGCGGGAGTCGGGGGCGACGAGCCCGGAACGATGGGTCGGAGGTG
CCGCCGAGCTACAGCAGTCGAAGAGGGAGTGGCGACAGCGCCGGGGCGAG
AGATGGGGGGCATAGAAGACCAGGGTCGAATCTGACCGGAGGCTCTCATC
GCAGTGGTGGCGGCAATGCCGCTGTGACGAACCAAAACGGAGAGAGGGTA
GATGTGGGTCGAAATGGGCAGGGCGGCGGCGGCGGCAGCAGCAGCGGCAG
GCGGGTCGTGCATCGAGTGGGCATGGATTGCCTGAGCCCGATCAACGTCT
CGAGGGGAGAGGCGGCTTCCAGTGGCGATGCCCAACCGCAAAGGACGGCA
CCATGCCGCAGCGCCGTCTTCTCTTCCCACCGAGAGCGCACTCCCGCCTC
CACCAGCCTACGCCCAGCCTGCCGCGGGCGGCGGCGGGAGTCGGGGGCGA
CGAGCCCGGAACGATGGGTCGGAGGTGCCGCCGAGCTACAGCAGTCGAAG
AGGGAGTGGCGACAGCGCCGGGGCGAGAGATGGGGGGCATAGAAGACCAG
GGTCGAATCTGACCGGAGGCTCTCATCGCAGTGGTGGCGGCAATGCCGCT
GTGACGAACCAAAACGGAGAGAGGGTAGATGTGGGTCGAAATGGGCAGGG
CGGCGGCGGCGGCAGCAGCAGCGGCAGGCGGGTCGTGCATCGAGTGGGCA
TGGATTGCCTGAGCCCGATCAACGTCTCGAGGGGAGAGGCGGCTTCCAGT
GGCGTGATTACGCCGCTTCACAGCGGGAAGAGCGGGCTGTCGTGCACCAC
GTCCGTCGGGCCGGCGCAGTACATGCGGGAGGAGATGCTCACGCCGTCCC
CGCCGCCCAACTGGGGACAGCACTTTGCGACGACGATCGAGCGCGAGCCG
GGGGAAATGGAGTTTAAAGACGAGTGATTACGCCGCTTCACAGCGGGAAG
AGCGGGCTGTCGTGCACCACGTCCGTCGGGCCGGCGCAGTACATGCGGGA
GGAGATGCTCACGCCGTCCCCGCCGCCCAACTGGGGACAGCACTTTGCGA
CGACGATCGAGCGCGAGCCGGGGGAAATGGAGTTTAAAGACGAGGAGGAG
CGCGCGCGGGCTGCCATGACCGATGGGGAGGCTGACTTGGAGCTGGGCGA
TAGCGGCTGGTGCGAGGTTCGCAAGACGCGTTACATCAACTACATTACGG
TGACCCTGACCCACGTGCTCATCTTCCTCGTGCTGGGTACCCGAGGGTAC
ACCATCGTTCGCGACACGCTGAGCGACGGGAGGAGCGCGCGCGGGCTGCC
ATGACCGATGGGGAGGCTGACTTGGAGCTGGGCGATAGCGGCTGGTGCGA
GGTTCGCAAGACGCGTTACATCAACTACATTACGGTGACCCTGACCCACG
TGCTCATCTTCCTCGTGCTGGGTACCCGAGGGTACACCATCGTTCGCGAC
ACGCTGAGCGACGGGTACTACCTTCGATGCGTGGCGTTTTTGTACTATCT
TCCAGCCTACGTTTTCATGCTCTTCAGCATCGACTACCTCCTAGCACAGG
TACTACCTTCGATGCGTGGCGTTTTTGTACTATCTTCCAGCCTACGTTTT
CATGCTCTTCAGCATCGACTACCTCCTAGCACAGTTCATCTACGCGCTAG
GCCCGATCGCCCACATGCAGGAGAACTCCAAGTACTTCAGCAGCAAGCCT
TGCCCCCGACCGGCGGTGATGCCGAGAGTAACCATCCAGATGCCGTTCAT
CTACGCGCTAGGCCCGATCGCCCACATGCAGGAGAACTCCAAGTACTTCA
GCAGCAAGCCTTGCCCCCGACCGGCGGTGATGCCGAGAGTAACCATCCAG
ATGCCGGTGTACAAGGAGAACCTCGTGGAGACCATCCTGCCGTCCATCCA
GTCCGTCATGACCGCCGTGCTGCACTACAAGAAGATGGGGGGGGAGGCGA
ACCTCTACATCAACGACGACGGCTTGCAGGTGTACAAGGAGAACCTCGTG
GAGACCATCCTGCCGTCCATCCAGTCCGTCATGACCGCCGTGCTGCACTA
CAAGAAGATGGGGGGGGAGGCGAACCTCTACATCAACGACGACGGCTTGC
AGGTCATCTCGGAGAAGGAGCGCAACGCACGCGTGTTCGCCTACAAGAGG
CACGGCGTGTCGTACGTGGCGAGGCCGCCGGCGTCTATCCGCCCTAGAAA
GGGTCTGTTCAAGAAGGCCTCCAACCTTAACTACGGGCTCAACGTGGCCA
TCAGGGTGGAGGAGATCATGGCGGAATCTGGCGGGCAGGTTACTGACCCT
GTTGAGGTCATCTCGGAGAAGGAGCGCAACGCACGCGTGTTCGCCTACAA
GAGGCACGGCGTGTCGTACGTGGCGAGGCCGCCGGCGTCTATCCGCCCTA
GAAAGGGTCTGTTCAAGAAGGCCTCCAACCTTAACTACGGGCTCAACGTG
GCCATCAGGGTGGAGGAGATCATGGCGGAATCTGGCGGGCAGGTTACTGA
CCCTGTTGAGGCTCTTCAGCTCGTGAGCGGGGAGTTCAACGATGAGTTCT
TCGCGGGAGGCGATGTGCGTATGGGGGACATCGTCCTCTTGGTCGACTCG
GACACTCGAGTGCCAGAGGATTGCCTGTCCAAGAGCTCAGGCAAGTCGTC
TTCATGAGCTCTTCAGCTCGTGAGCGGGGAGTTCAACGATGAGTTCTTCG
CGGGAGGCGATGTGCGTATGGGGGACATCGTCCTCTTGGTCGACTCGGAC
ACTCGAGTGCCAGAGGATTGCCTGTCCAAGAGCTCAGGCAAGTCGTCTTC
ATGA
back to top