mRNA_E-fasciculatus_F_contig12447.1877.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: D7FPA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPA8_ECTSI) HSP 1 Score: 414 bits (1065), Expect = 2.970e-140 Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 1
Query: 4 IRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEMSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQ 660
IRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAE+SQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQ
Sbjct: 265 IRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQ 483
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: A0A6H5K9M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M5_9PHAE) HSP 1 Score: 369 bits (946), Expect = 2.810e-119 Identity = 201/222 (90.54%), Postives = 207/222 (93.24%), Query Frame = 1
Query: 4 IRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEMSQADASATRSLDDKIWLYSYRCFGFAL---YVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQ 660
IRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAE+SQADASATRS + + + FGF L + G QMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYT+IINRGRVEQNFEPSGFDCRLDQ
Sbjct: 377 IRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEVSQADASATRSKYPRDSVTTNPAFGFCLLLSFFGFQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTVIINRGRVEQNFEPSGFDCRLDQ 598
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: A0A835ZA44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA44_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.550e-59 Identity = 106/219 (48.40%), Postives = 152/219 (69.41%), Query Frame = 1
Query: 4 IRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEMSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQ 660
+R EL ++E+QKHVQFA+TFLVGWDN+ + EVE+ R SNG+ A +LAE + A +A+R+L K L+ RC G +Y+ +Q+AAW AI+ LTA S +A+ + +L +V+W+ + ++ SIVP VT+IN IMP+ IK IT +E+WD +T+TYML RM+LAKILNA IQA SY+LLA+PYL + + R VEQ ++ + F+CR+DQ
Sbjct: 165 LRCELDALEEDQKHVQFARTFLVGWDNNTAKGHEVEELRCSNGMQLAVLLAEDTAAKTTASRTLRQKALLFVRRCLGMVVYMALQLAAWYAIVLLTASSRALATWILNELAAVSWLKGFTSTLAVSIVPVGVTIINTIMPVFIKLITDIEQWDSAKTITYMLVTRMYLAKILNACIQAASYMLLANPYLISRIDTNL---RRNVEQGYDSTSFECRIDQ 380
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: A0A6A4CZB2_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CZB2_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.160e-22 Identity = 75/224 (33.48%), Postives = 114/224 (50.89%), Query Frame = 1
Query: 10 KELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEMSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIIN-------RGRVEQNFEPSGFDCRLDQ 660
K + V+ + ++++ L WD SL+ +V D + + + E +A+ +R+ K LY+ R F Y+ +Q A+W II LT +S + QLQ +A + A ++SIVPA VTVINAI+P +I +T +EKWD + R++LAKILN IQ S+ LL DP L Q + + R V +F+P FDCR +Q
Sbjct: 344 KAVQAVENASEKPKYSRILLNAWDFSLTTSDQVSDLKKTIAEQVKIAMEEEKRAETIKSRTKKQKYILYARRFVAFIFYMMIQAASWYLIILLTTQSSQL------QLQ-IAARAAIFAPYASSIVPAVVTVINAILPKLISLLTTIEKWDDVGFAIKAMVTRLYLAKILNVLIQLFSFALLLDPMLLTSTQNILELFTFDGSTVRKNVMLDFKPESFDCRAEQ 560
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: A0A2R5GNY3_9STRA (Transmembrane channel-like protein 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNY3_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.620e-22 Identity = 71/195 (36.41%), Postives = 113/195 (57.95%), Query Frame = 1
Query: 10 KELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLA--EMSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQ---SVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAG 579
K + ++ +FA++ L WD+S+S+ +EVED L + L L E++ A+ +RS +++ L + R +Y+ VQ ++ AAII+LTA S ++ + Q + S+ W+ +IS SIVP V+VINA++P ++ +T EKWD T + R+F+AKILNAFIQ S+L L DPY+ G
Sbjct: 505 KAFGLFEDLDSQSRFAQSALNAWDHSISDPREVED--LKHTLLDQYFLTTHELNTANKKKSRSFKERLTLRARRITANFIYISVQGSSAAAIIYLTATSAQMSQNVLQIISDNASLQWLLPIVTLISGSIVPLAVSVINALLPAVVTFVTAFEKWDDGGFHTKYMLSRLFVAKILNAFIQVFSFLQLLDPYMLRG 697
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: W2QU44_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QU44_PHYPN) HSP 1 Score: 103 bits (256), Expect = 9.930e-22 Identity = 74/227 (32.60%), Postives = 114/227 (50.22%), Query Frame = 1
Query: 10 KELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEMSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVIS---TSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIIN-------RGRVEQNFEPSGFDCRLDQ 660
K + V+ + ++++ L WD SL+ Q + D + + + E +A+ +R+ + LY+ R F YV +Q A+W II LT +S + QLQ I++ AA+ + +SIVPA VTVINAI+P +I +T LEKWD + R++LAKILN IQ S+ LL DP+L Q + + R V F+ + CR +Q
Sbjct: 338 KTVQAVENTSEKPKYSRILLNAWDFSLTTQNQASDLKKTIAEQVQLAMEEEKRAETIKSRTKKQRYILYARRFVAFVFYVAIQAASWYLIILLTTQSSQI------QLQ----IAEKAAIFAPYASSIVPAVVTVINAILPKLISLLTALEKWDDVGFAIKAMVTRLYLAKILNVLIQMFSFALLLDPFLLTSTQKILDLFTFEGSTVRENVMLEFKSEVYTCRAEQ 554
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: A0A329SIR7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SIR7_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.610e-21 Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 1
Query: 52 FAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEMSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVIS---TSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIIN-------RGRVEQNFEPSGFDCRLDQ 660
+++ L WD SL+ Q +V D + + + E +A+ +R+ + LY R F Y+ +Q A+W II LT +S + QLQ I++ AA+ + +SIVPA VTVINAI+P +I +T +EKWD + R++LAKILN IQ S+ LL DP L Q + + R V F+P + CR +Q
Sbjct: 352 YSRILLNAWDFSLTTQDQVSDLKKTIAEQVQLAMEEEKRAETIKSRTKKQRYILYVRRFVAFVFYMAIQAASWYLIILLTTQSSQI------QLQ----IAEKAAIFAPYASSIVPAVVTVINAILPKLISLLTAIEKWDDVGFAIKAMVTRLYLAKILNVLIQMFSFALLLDPLLLTSTQNILGLFTFEGSTVRKNVMLKFKPEVYTCRAEQ 554
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: A0A7S1G983_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G983_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 4.490e-17 Identity = 70/223 (31.39%), Postives = 109/223 (48.88%), Query Frame = 1
Query: 10 KELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEMSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYT------IIINRGRVEQNFEPSGFDCRLDQ 660
K + +++ ++ ++++ L WD SL EV D + + G L E AD RS+ LY+ R G L V +Q A II LT S +A+ + A + A + IVP V+V+NA+ P I+ A++K EKWD T L R+F+AK+LN +Q S+ LADPY+ G + ++ R ++ F+P + CR DQ
Sbjct: 358 KAISVLEGKEGEHKYSQITLNAWDYSLV-ATEVADLKYAIGEQILLALHEDEVADLQRKRSIKQDAILYTRRGVGLLLSVALQGGAAFVIIQLTITSAQLANVIK------ATGGEVLAPFADFIVPVAVSVLNALQPPILTALSKFEKWDSGGTQVKTLVWRLFIAKMLNMLLQIFSFAQLADPYMLRGPTFGFSDTDFLVSVRQSTQKRFQPDSYACRADQ 573
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: A0A3R7JCL8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JCL8_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.010e-15 Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 1
Query: 202 KIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNF 627
K LY+ R F Y +Q A+W II LT +S + +A A +++IVPA VTVINAI+P +I +T +EKWD + R++LAKILN IQ S+ LL DP L Q ++ ++ Q+F
Sbjct: 3 KYILYARRFIAFIFYTAIQAASWYLIILLTTQSSELQLKIATDAAFFAPY-------ASTIVPAAVTVINAILPKLISLLTAIEKWDDVGFAIKAMVTRLYLAKILNVLIQVFSFALLLDPQLLTSTQTASLVELNKLLQDF 137
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Match: A0A2P4XAR1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XAR1_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.010e-15 Identity = 63/185 (34.05%), Postives = 97/185 (52.43%), Query Frame = 1
Query: 91 SNQQEVEDYRLSNGLAAANMLAEMSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIII---NRGRVEQNFEPS 636
+++++V D + + ++ E +A+ R+ + LY+ R F YV +Q A+W II LT +S L Q+ S A I A ++SIVPA VTVINAI+P +I +T +EKWD + R++LAKILN IQ S+ LL DP L +Q + + + +NF P+
Sbjct: 299 ASEKQVNDLKKTIAEQVKLVMEEEKRAETIRLRTKKQRYILYTRRFVAFIFYVTIQAASWYLIILLTTQSSQ----LQLQIASKAAIF---APYASSIVPAVVTVINAILPKLILLLTAIEKWDDVGFAIKAMVTRLYLAKILNVLIQLFSFALLLDPLLLTSKQNILDLFSFEGSTIRENFIPA 476 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12447.1877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12447.1877.1 >prot_E-fasciculatus_F_contig12447.1877.1 ID=prot_E-fasciculatus_F_contig12447.1877.1|Name=mRNA_E-fasciculatus_F_contig12447.1877.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=220bp QIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMback to top mRNA from alignment at E-fasciculatus_F_contig12447:73..3500- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12447.1877.1 ID=mRNA_E-fasciculatus_F_contig12447.1877.1|Name=mRNA_E-fasciculatus_F_contig12447.1877.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3428bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12447:73..3500- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12447:73..3500- >mRNA_E-fasciculatus_F_contig12447.1877.1 ID=mRNA_E-fasciculatus_F_contig12447.1877.1|Name=mRNA_E-fasciculatus_F_contig12447.1877.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1320bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12447:73..3500- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |