mRNA_E-fasciculatus_F_contig12441.1875.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12441.1875.1
Unique NamemRNA_E-fasciculatus_F_contig12441.1875.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: D8LR70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR70_ECTSI)

HSP 1 Score: 531 bits (1368), Expect = 3.710e-186
Identity = 317/338 (93.79%), Postives = 321/338 (94.97%), Query Frame = 1
Query:    4 RASTREAGLRAVIKFMLHSPDLEPVLAMRETVLSTLIGVARGKGTESQGVHALRALSVLCVCIGPEEEEAFRALRRPLRSLITRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVATRMTKQHLRVFRELLSSPDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQVR 1017
            RASTREAGLRAVIKFMLHSPDLEPVLAMRETVLS LIGVARGKGTESQG HALRALSVLCVCIGPEEEEAFR+LRRPLRSLITRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEV DKVCAAALSGWGLLATTVSRSWVATRMTKQHLRVFRELLSSPDMDVR+EAGENLALLHESRIILGLVGG         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GAAEMEAMDLTVLWEEVVEE+KGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQ +
Sbjct:   81 RASTREAGLRAVIKFMLHSPDLEPVLAMRETVLSALIGVARGKGTESQGAHALRALSVLCVCIGPEEEEAFRSLRRPLRSLITRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVTDKVCAAALSGWGLLATTVSRSWVATRMTKQHLRVFRELLSSPDMDVRIEAGENLALLHESRIILGLVGGGEGGSADWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GAAEMEAMDLTVLWEEVVEEMKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQTQ 414          
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: A0A7S2XZE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE4_9STRA)

HSP 1 Score: 179 bits (455), Expect = 4.990e-49
Identity = 116/338 (34.32%), Postives = 177/338 (52.37%), Query Frame = 1
Query:    4 RASTREAGLRAVIKFMLHSPDLEPVLAMRETVLSTLIGVARGKGTESQGVHALRALSVLCVCIGPEEEEAFRALRRPLRSLITRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVATRMTKQHLRVFRELLSSPDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQVR 1017
            R  TR  GL  +   +L     E +   RETVL+ ++   R    ++  + A RAL+VLC+ IGPEEEE ++ +  PLR+++TR  H   R  A+R LA+ACFICSS D +T + LD    VF R S G+ V D+V  AALS WGLLATT++  +V      + LR     L   DM VRM AGEN AL+HE ++                                                  G AE+        W+E++  ++    +SSK++S++ +K+ R TFR+++A+I E++ P E + +  G++ +  WAHI Q++ALR+ ++ GFQ++
Sbjct:   87 RRDTRCKGLTELTSMLLRGSP-EQIEDFRETVLTNVLQNIRSGDAKTVPL-ACRALAVLCILIGPEEEELYQRIENPLRTIVTRHSHAEGRKAALRCLAIACFICSSQDADTHDLLDFCQRVFQRRSPGVMVTDEVIPAALSCWGLLATTLTTEFVHQTAGPRVLRTLLAFLEHGDMSVRMAAGENAALIHECKM-------------------KKVHELEALAEEKQLDEAEAEELIHQADDEQGIAEV--------WDEIIARMEDLRGESSKRISKKNRKEVRATFREIYASIVEDDNPSEQLQVVGGTIRLNTWAHIVQVDALRNTMRGGFQIQ 395          
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: A0A835YVX4_9STRA (Interferon-related developmental regulator-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVX4_9STRA)

HSP 1 Score: 179 bits (454), Expect = 8.930e-49
Identity = 118/338 (34.91%), Postives = 169/338 (50.00%), Query Frame = 1
Query:    4 RASTREAGLRAVIKFMLHSPDLEPVLAMRETVLSTLIGVARGKGTESQGVHALRALSVLCVCIGPEEEEAFRALRRPLRSLITRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVATRMTKQHLRVFRELLSS-PDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPE-EVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQ 1011
            R++TR AGL A++  +  + DL+ + A R  +   ++   R     ++              +G EE+E +R L R L + ITR +HEG RV A R LA+ACF+CSSDDD   E L  L+ VFSRTS+G EV D V AAAL GW LLAT   R W+     +  L   R+LL+    +DVR  AGE  AL+                                                        AA  E  D+  LW+E+ + ++G+ T++SK++S++TKK QRRTFR L A + E  PP  + +SLQ+ ++ +  WA + +L ALR+CL  G Q
Sbjct:  108 RSATRLAGLGALLTLLQAAADLDAIHARRAALAEAVLACLRRPAAPAEXXXXXXXXXXXXXXLGAEEDELYRQLARLLTTSITRGKHEGSRVEACRALAMACFVCSSDDDANDEALATLSAVFSRTSEGTEVTDDVAAAALRGWCLLATAGPREWLGGPALEALLPAVRDLLAGGASLDVREAAGEAAALMXXXXXXXXXXQAEAGIEE--------------------------------------AAAEEYSDVETLWQEIGDLMQGYSTETSKRMSKDTKKSQRRTFRDLHAAVVEGAPPPWQELSLQSCAVEITTWAELVRLEALRACLHGGLQ 407          
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: A0A7S3XM20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM20_HETAK)

HSP 1 Score: 149 bits (377), Expect = 1.120e-37
Identity = 111/344 (32.27%), Postives = 159/344 (46.22%), Query Frame = 1
Query:    4 RASTREAGLRAVIKFMLHSPDLEPVLAMRETVLSTLIGVARGKGTESQGVHALRALSVLCVCIGPEEEEAFRALRRPLRSLITRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVATRMTKQHLRVFRELLSS--PDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEM------EAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQ 1011
            R++TRE  L  + + ML +P  E V A R  +L  L+  + GKG  ++ V A RA    CV +GP+E+E FRALRR L  L+TR   +  R  A+R LA+ CFICSS   +T E L+L  D+   TS G  + D+   AAL  WGLLATT    ++        + +  E L      ++ RM A E LAL++E+                                                     A E+      E   +   W E V  +     +SSK++S+  +K+QR   R + A + + E PEE +S Q GS+TV  W    Q+NALR+  + GFQ
Sbjct:   92 RSTTREEQLGVLYEHMLAAPSAEGVYAARAEILERLLA-SLGKGG-AEAVLACRAAGAFCVVLGPDEQEVFRALRRRLERLVTRGEDDEARTAAIRALAVGCFICSSVHHDTLELLELFVDLLQGTSQGEPLMDESVPAALEAWGLLATTAGEEYMQETGGPVVVPLCLEQLQGGGAGVETRMAAAEVLALVYEA-----------------------------LHPKEEEPDPEDWRAEQARRRAVAAGELVEEVPEEDPFMAEQWAEAVGVLGRLQAESSKRVSKRDRKEQRSVVRDVRAFLEDGETPEETISFQGGSITVTSWERFCQVNALRAACRGGFQ 404          
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: A0A4D9DHN1_9STRA (IFRD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHN1_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.830e-37
Identity = 102/335 (30.45%), Postives = 161/335 (48.06%), Query Frame = 1
Query:    4 RASTREAGLRAVIKFMLHSPDLEPVLAMRETVLSTLIGVARGKGTESQGVHALRALSVLCVCIGPEEEEAFRALRRPLRSLITRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVATRMTKQHLRVFRELLSSPDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGF 1008
            R + RE  LR +I  +     ++  +A RE+V S+L+G+ R +  E++GV    AL ++ + IGPEE+E F  +R PL  +ITR + E  R+ A RTLAL  FIC+++++ T   L     +F+  S+G    +++ AA +  W LL T   R +         L  F  LL +   D+R+ AGE +ALL E     GL                                               A E E +D       +V+ ++    + SK++SR+ KK QR +FR++ + + + + PEEV+S +  S  +  W  +KQ+ ALR CLQ GF
Sbjct:   48 RTTAREDCLRELIAGLRSYTFVDQAIANRESVFSSLVGLLR-RSRETEGVLCAEALGMMMLLIGPEEDEIFNLVRAPLEFVITRGQSERTRIEATRTLALGSFICNTEEERTLAHLAFFEALFTGESEGGRASEELKAAGVDAWSLLFTVAPRGYNTHESRALLLENFLPLLDASSADLRVAAGEAIALLREHWRQEGLA-----------------------------------------VHDVSADEEEVVD------SIVDRLQDMAREGSKRMSRKDKKAQRASFREICSAVVDGQHPEEVISYRTRSFRLTSWVKMKQVEALRDCLQGGF 334          
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: A0A7S0PVU5_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PVU5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.520e-31
Identity = 100/349 (28.65%), Postives = 163/349 (46.70%), Query Frame = 1
Query:    4 RASTREAGLR----AVIKFMLHSPDLEPVLAMRETVLSTLIGVARGKGTESQGVHALRALSVLCVCIGPEEEEAFRALRRPLRSLI-TRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVA------TRMTKQHLRVFRELLSSPDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQVR 1017
            R++TRE  LR    A+ +F       E V +    V + L G+  G    ++   A R L    V +G + +E F ++ + LR ++ T +R   VR  A+RTL +A FICS+D D T+  L L  +V +           + A AL  W LL+TT+  +++A      T    Q L +    L    +++R  AGE +AL+HESR+ LG+                                                   +  +  V+ +EV + +     +S + +S++ KK+QR TFR+  ATI ++EPP+EV++ + G+L +  W  + QLN +R CLQ GFQ++
Sbjct:   40 RSATREGYLRKLFRALTQFATGYAARETVASCESLVPACLYGLRGGVAKPAEQYAACRVLEATAVILGGDNDEYFESIEKYLRRVVMTTTRAVQVRGAALRTLCMANFICSTDTDITNSLLALCEEVCAPEYRNESASSILRATALDCWALLSTTIHDAFIAGDDDFQTGRGLQILPLLSNCLDHTSVELRSAAGECVALIHESRLKLGV---------------------------------EKEDCDNASDRRYRRGSWDGSEWEVIMDEVKQRVAELSVESGRHMSKKAKKEQRATFREFMATIVDDEPPKEVITFRGGTLELNSWKEVVQLNFIRHCLQGGFQIQ 355          
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: A0A7S3Q2Q3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2Q3_9STRA)

HSP 1 Score: 129 bits (323), Expect = 6.010e-30
Identity = 106/354 (29.94%), Postives = 162/354 (45.76%), Query Frame = 1
Query:    4 RASTREAGLRAVIKFML-HSPDLEPVLAMR----ETVLSTLIGVARGKG--TESQGVHALRALSVLCVCIGPEEEEAFRALRRPLRSLI-TRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVATRMTKQH--------LRVFRELLSSPDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQVR 1017
            RA  RE GLR + K +  H+       A+R    E +L       RG G  T ++   A R L    + +G  E+E    L   L  +I   SR   VR  A+R L++A FIC S  D +   LDL   V +    G  VP  + A AL  W LL+TT+  +++A               L +  + L+S ++D+R  AGE +AL+HE+R+ LG+                                                   +  +  V+ +EV + +     +S K +S++ KK+QR+TFR+  +TI ++E P EVV+ + G +T+ +W  I QLN +R CLQSGFQV+
Sbjct:   95 RAKKREQGLRTLFKAITQHAAGYNGQEAIRSQLDEIILPACKNSLRGGGSSTPAEQYAACRVLEATSILLGGGEDEFAEGLFTTLSRVIKVTSRAAQVRGAALRALSMAYFICMSGVDASDRVLDLCEQVCATEFRGEVVPPILRATALDCWALLSTTIHNAYLAGNDIPGSGDGRGLVILPLLNDCLNSSNLDLRCSAGECVALIHEARLDLGI---------------------------------DEDEGENASERRYRRGSWDGSEWEVIMDEVKQRVAELSVESGKHMSKKAKKEQRQTFREFMSTIVDDESPNEVVAFRGGQMTLNNWREIIQLNFIRHCLQSGFQVQ 415          
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: A0A7S1YWK5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YWK5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.300e-28
Identity = 87/296 (29.39%), Postives = 145/296 (48.99%), Query Frame = 1
Query:  157 ALRALSVLCVCIGPEEEEAFRALRRPLRSLITRSRHEG--VRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVATRMTKQHLR-------VFRELLSSPDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQVR 1017
            A R L V  V IG ++++   ++ +PLR L+ +  H    VR  A+R LA+  FIC +D+  T   L+L  +V +    G +V   + A AL  W LL++TV+ +++A    ++ L        +    L+S +M++R  AGE +AL+HESR+ LG+                                                   +  +  VL +EV + +     +S + +S++ KK+QR TFR   ATI ++EPP EVV+ + G++T+  W  I ++N +R CLQ GFQ++
Sbjct:    2 ACRVLEVTSVIIGHDQDDYVESIEQPLR-LVIKGTHRAAVVRGAALRALAMTHFICGADESGTHSVLNLCEEVCAPQYRGEDVSPCLRAIALDCWALLSSTVADAYLAGDEMEEDLGRGLVILPLLSTCLNSSNMELRCAAGECVALIHESRLNLGI---------------------------------DEDEGENASERRFRRGSWDGSEWEVLMDEVKQRVAELSVESGRHMSKKAKKEQRATFRDFMATIVDDEPPVEVVNFRGGTVTLRTWREIIEINFVRHCLQGGFQIQ 263          
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: A0A7S2H1J3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H1J3_9STRA)

HSP 1 Score: 123 bits (309), Expect = 6.430e-28
Identity = 98/355 (27.61%), Postives = 163/355 (45.92%), Query Frame = 1
Query:    4 RASTREAGLR----AVIKFMLHSPDLEPVLAMRETVL--STLIGVARGKGTESQGVHALRALSVLCVCIGPEEEEAFRALRRPLRSLI-TRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVATRMTKQH----------LRVFRELLSSPDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQVR 1017
            R   RE  LR    A+ +F       E VL+  +  +  +   G+  G  + ++   A R L V  V +G + ++   A+ RPLR ++ +  R   VR  A+R L++  FIC +++  T+  LDL  +V +    G +V   + A AL  W LL+TTV  +++A                 L +  + L+  ++++R  AGE +AL+HESR+ LG+                                                   +  +  VL +EV + +     +S + +S++ KK+QR TFR   ATI ++EPP EVV+ + G+L +  W  I Q+N +R CLQ GFQ++
Sbjct:  109 RTVKREQYLRRLFKAISQFAAGQSGQEAVLSRVDDAIVPACKTGLRGGSASPAEQYAACRVLEVTSVILGGDHDDYVEAVDRPLRIVVKSTGRAPQVRGAALRALSMIHFICDANEAGTNSVLDLCEEVCAPQYRGEDVCPTLRAIALDCWALLSTTVDDAYIAGDELGSETGENGRGVVILPLLSQCLNESNVELRCAAGECVALIHESRLNLGI---------------------------------DDDEGENASERRFRRGSWDGSEWEVLMDEVKQRVAELSVESGRHMSKKAKKEQRATFRDFMATIVDDEPPVEVVNFRGGTLNLKSWREIVQINFVRHCLQGGFQIQ 430          
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Match: A0A7S4J5R0_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5R0_9STRA)

HSP 1 Score: 120 bits (301), Expect = 7.060e-27
Identity = 99/354 (27.97%), Postives = 160/354 (45.20%), Query Frame = 1
Query:    4 RASTREAGLR----AVIKFMLHSPDLEPVLAMRETVL--STLIGVARGKGTESQGVHALRALSVLCVCIGPEEEEAFRALRRPLRSLITRS-RHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLATTVSRSWVA---------TRMTKQHLRVFRELLSSPDMDVRMEAGENLALLHESRIILGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQVR 1017
            R++ RE  LR    A+ ++       E V A  + ++  +   G+  G  + ++   A R L    + IG + ++   A+   LR  I  + R   VR  A+R L +A FIC +D   T+  LDL   V +    G EV   + A AL  W LL+TTV+ +++A         +      L + +E L+   +++R   GE +AL+HE+R+ LG+                                                   +  +  VL +EV + +     +S   +S++ KK+QR TFR+  ATI ++E P E+VS + G LT+  W  I QLN +R CLQSGFQ++
Sbjct:   97 RSAKREQHLRKLFKAITQYATGEQGRESVYAKLDDIVIPACFAGLRGGIASPAEQYAACRVLEATSIIIGGDMDDYCEAIDDQLRKTIKATGRASMVRGAALRALCMAHFICGTDMSATNSVLDLCEAVCAAKYRGEEVNPTLRAIALDSWALLSTTVADAYIAGDELGGVDDSGRGIIILPILQECLNHTSVELRSAGGECVALIHEARLNLGI---------------------------------NDDEGENATERRYRRGSWDGTEWEVLMDEVKQRVAELSVESGHHMSKKAKKEQRATFREFMATIVDDESPSEIVSFRGGQLTLKSWREIIQLNFIRHCLQSGFQIQ 417          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12441.1875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR70_ECTSI3.710e-18693.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XZE4_9STRA4.990e-4934.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YVX4_9STRA8.930e-4934.91Interferon-related developmental regulator-domain-... [more]
A0A7S3XM20_HETAK1.120e-3732.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9DHN1_9STRA1.830e-3730.45IFRD domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S0PVU5_9STRA1.520e-3128.65Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S3Q2Q3_9STRA6.010e-3029.94Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1YWK5_9STRA2.300e-2829.39Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2H1J3_9STRA6.430e-2827.61Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4J5R0_9STRA7.060e-2727.97Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12441contigE-fasciculatus_F_contig12441:14..3754 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score536.2
Seed ortholog evalue1.1e-149
Seed eggNOG ortholog2880.D8LR70
Preferred nameIFRD1
GOsGO:0001085,GO:0001558,GO:0001709,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006355,GO:0006357,GO:0006950,GO:0007275,GO:0007399,GO:0007405,GO:0007518,GO:0008134,GO:0008150,GO:0008283,GO:0008361,GO:0009611,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010721,GO:0010769,GO:0010771,GO:0010975,GO:0010977,GO:0014009,GO:0014706,GO:0016043,GO:0019219,GO:0019222,GO:0022008,GO:0022603,GO:0022604,GO:0030154,GO:0030308,GO:0030516,GO:0030517,GO:0031099,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031345,GO:0032501,GO:0032502,GO:0032535,GO:0040007,GO:0040008,GO:0042060,GO:0042063,GO:0042246,GO:0042692,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043403,GO:0044093,GO:0044424,GO:0044464,GO:0045165,GO:0045445,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045893,GO:0045926,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048625,GO:0048638,GO:0048640,GO:0048670,GO:0048671,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050770,GO:0050771,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051239,GO:0051241,GO:0051252,GO:0051254,GO:0051960,GO:0051961,GO:0060255,GO:0060284,GO:0060537,GO:0061061,GO:0061351,GO:0061387,GO:0061629,GO:0065007,GO:0065008,GO:0065009,GO:0071840,GO:0072089,GO:0080090,GO:0090066,GO:0120035,GO:1902680,GO:1903506,GO:1903508,GO:2000026,GO:2000112,GO:2001141
EggNOG free text desc.RNA polymerase II sequence-specific DNA-binding transcription factor binding
EggNOG OGsKOG2842@1,KOG2842@2759
COG Functional cat.CO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionInterferon-related developmental regulator, N-terminal
Ec32 orthologEc-06_004140.1
Exons4
Model size1018
Cds size1017
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927750.0747542-CDS-E-fasciculatus_F_contig12441:13..1991622927750.0747542-CDS-E-fasciculatus_F_contig12441:13..199Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12441 14..199 -
1695995678.936738-CDS-E-fasciculatus_F_contig12441:13..1991695995678.936738-CDS-E-fasciculatus_F_contig12441:13..199Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12441 14..199 -
1622927750.0874236-CDS-E-fasciculatus_F_contig12441:888..13311622927750.0874236-CDS-E-fasciculatus_F_contig12441:888..1331Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12441 889..1331 -
1695995678.949973-CDS-E-fasciculatus_F_contig12441:888..13311695995678.949973-CDS-E-fasciculatus_F_contig12441:888..1331Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12441 889..1331 -
1622927750.0983787-CDS-E-fasciculatus_F_contig12441:2911..31521622927750.0983787-CDS-E-fasciculatus_F_contig12441:2911..3152Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12441 2912..3152 -
1695995678.9599109-CDS-E-fasciculatus_F_contig12441:2911..31521695995678.9599109-CDS-E-fasciculatus_F_contig12441:2911..3152Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12441 2912..3152 -
1622927750.111716-CDS-E-fasciculatus_F_contig12441:3607..37541622927750.111716-CDS-E-fasciculatus_F_contig12441:3607..3754Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12441 3608..3754 -
1695995678.9744627-CDS-E-fasciculatus_F_contig12441:3607..37541695995678.9744627-CDS-E-fasciculatus_F_contig12441:3607..3754Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12441 3608..3754 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12441.1875.1prot_E-fasciculatus_F_contig12441.1875.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12441 14..3754 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12441.1875.1

>prot_E-fasciculatus_F_contig12441.1875.1 ID=prot_E-fasciculatus_F_contig12441.1875.1|Name=mRNA_E-fasciculatus_F_contig12441.1875.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=339bp
NRASTREAGLRAVIKFMLHSPDLEPVLAMRETVLSTLIGVARGKGTESQG
VHALRALSVLCVCIGPEEEEAFRALRRPLRSLITRSRHEGVRVGAVRTLA
LACFICSSDDDNTSETLDLLADVFSRTSDGLEVPDKVCAAALSGWGLLAT
TVSRSWVATRMTKQHLRVFRELLSSPDMDVRMEAGENLALLHESRIILGL
VGGGGEGGSADWSGGGGGAAEATEGGAEEEEEEEEEEDEGDQDDDDGAAE
MEAMDLTVLWEEVVEEIKGFITDSSKKLSRETKKQQRRTFRQLFATIGEN
EPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQVR
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mRNA from alignment at E-fasciculatus_F_contig12441:14..3754-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12441.1875.1 ID=mRNA_E-fasciculatus_F_contig12441.1875.1|Name=mRNA_E-fasciculatus_F_contig12441.1875.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3741bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12441:14..3754- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AACAGGGCGTCCACGCGCGAGGCCGGCTTGAGGGCGGTCATCAAGTTCAT GCTTCACTCTCCGGACCTCGAGCCCGTGCTGGCCATGCGGGAGACGGTGC TCTCGACCCTGATCGGCGTTGCTCGCGGGAAGGGCACGGAGTCGCAGGTG GGTGGGTGTTGTTGGAGGCGTTTTTGCAGGCGTTTTTTTTTTTTCTCGCC GTGCCTTACACCTATTGTTATGGAGTCGCACGTAGCAGATGGATGTACGG GGAGAGATCACGCGCGCTTTTCTCCCCGCTGCGTGTGTCCCAGAGGGCCT GTTGTGTAGCGCGGGTCGTTGGTGTTGTAGTCCGGTCGGGAAAGGGAGTT CCAGTGCATGTCGGGAGGGGCGAGGTTTCCAACGCATGATAATGATAGAG CGTGTTTCCGAGGAAAGGTGCCGAAAAGCGTCCCACGTTCTCTTGTTACG TAGCCCTACAGACGTGTGTACATGCGGGAGAGCTCACACACACACACACA CGCACACGCACACGCACACGGACGTCTTTTCATGGGTCAGCAGGCTAGCG CGGTCGATGCTAATAGTAAGAACACACACAATCACACGCGAAAAATTACC AGGGGGTTCACGCGCTGCGAGCGCTGTCAGTGCTGTGCGTGTGCATCGGG CCGGAGGAGGAGGAGGCGTTTAGGGCCCTGCGGCGGCCGCTGCGGAGCCT CATCACCCGCAGCCGCCACGAAGGGGTGAGGGTCGGGGCGGTGCGCACCC TGGCGCTGGCGTGCTTCATCTGCTCGAGCGACGACGACAACACTAGCGAG ACCCTGGACCTTTTGGCCGACGTGTTCAGCAGGACGAGCGATGGTAAGCG GTGTGTCACGAGCGCTTTGCGGGGTGGGGTGTTGCTTGCATCGACCGCGC TAGCCGGCTGACCGATGGATATTCGTCAGGCATACAAGGGCGCTTCGCGG TCGCCGCTACGCTCGTAGGTTGCATGGCGATGGTAAGGGTGTGCGGGTAG CTTTGTCTGTGCTCATTATGTACATAGTTCATCATCCCACCCCGCAACCA CCAAACACAGCATGTATGTTGTGTACTTCGGAGTCGCTGTAGTGTAGCTT ATGTGCCGTATCAAGCAAAAACCCTAAGCAGCGGCCGTACTTCTCTCGTA CCACAGCATAAGTATATCCCGATGGGGCGGCGGAGGGGGATATATACCGC GATGGCTACTGCAACACTCATATATATATCTGGTTCCGAACCTACTGCAA CACCTTTTGCTGTACCCATTTTTTGCACCGACCAAAAACCTAGGATCCTA TTGTAGATAGGATACAGCCCCGACCCACAGGGCTCGTTTTTTTGCACGTC ACAGCCAGCAGCAGTAGTGTTCACGGGCTGCACTTGCCCAAGGAATGTTC CGAGAAATGGCATTCCGACATTCAGAGGGACACACGTTTGCTCCGCTTGA AGGTGTAGGTAGTCACTGCTGTGCGCACGACACCGGCCGCTCCCGCCCCC CCCCGCTTTTCGTCGGGATCGAAAGGGAGATGCACTACAGCAGTAGAGTG CTTTGTCTCGTGTCATGCGCAGACTTCGTCGCTTTGTTCTCGAGGGTGGC GAGGGTGGGTAGCTAGCGCAGTAGCAGCCAGCGAACACGCACCGCGTCAG TCAGCCGCTTGCCGAATGCATGATGAATGGACCGCGCCGTGGAGCCATGG TAGATCTCGGAGACGCGCCTTTCGGCCCTCCGTAGCGGTCGGCGACGGCC GCCCCGAGAGCGAGTCGCGCGCGGGCAAGGCCCTCGCGGCCCGGGGCTAC CGGCAGGCGCGATTCCCGCGGCGAACGGAGGCGCATGGGCGGAGCAATCG CAAAAAATGGGCTCTAGGCTCACGAGAGCACGAGGATGGCCTTTCCGGCG ATCTCGTGAGCCCTGAGCCCGTAGGAAATTCGTCTATAGGTCTTTTGTGG GATGGAAAGCTTAAGTGCGCTCTCTAGTCAAAGGGTTCTATCGGCAGGGG GGGGCGCAGGAGTTAGACGACGGTAGTGCCCTGCTTCTGAAATACAAGGA AGAGACTCCATGCCACCAGGCGGGCAGCATTGTTGCTGCAGCATGGTGGC TGTGTTTCTTTGGTTTACATCGACAGAGCTAAGCGGCTGGCCAATGCATA GGTTAAACTCTGATAGTGGGATGGAAGCTGCTGTAACCCAATGAAAAGCT TCACTTTCCGTCTGCTAGTAAAAGGAAGGGGTGCAAAGGTCCCCACCACA ACACCACAACAACCTGCCTTTATGATTGACCCCACCCCCATGCTCCGCCC TATCCAGGACGCGTGGTCAATGGTCTAACAGCTGAAGGCATGCGAAACAT GAGCACCACCTCCCCGTCCCTTCCCCGCCCCCCGTGTCTCACGGCCGTGC GGCCGGCCTCCCAAAACCAACAGGCTTAGAGGTGCCGGACAAGGTGTGCG CCGCGGCGCTGTCGGGGTGGGGGCTCCTGGCCACCACGGTGTCGCGGTCC TGGGTGGCGACGCGCATGACGAAGCAGCACCTCCGAGTGTTCAGGGAGCT GCTCTCGAGCCCGGACATGGACGTGCGCATGGAGGCCGGAGAGAACCTCG CCCTCCTCCACGAGAGCCGAATCATCTTGGGGCTGGTTGGCGGCGGCGGG GAAGGGGGGTCCGCGGATTGGTCCGGCGGAGGGGGGGGCGCTGCGGAGGC GACGGAGGGCGGGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATG AAGGGGACCAGGATGATGATGATGGGGCGGCGGAGATGGAGGCGATGGAT TTGACGGTGCTGTGGGAGGAGGTGGTGGAGGAGATCAAGGGGTTCATCAC CGACAGCAGCAAGAAGGTGCGGCGTGCTGGAAGGCGCGGTGGTGGGCAGG GTTGGGGATCTCGTGGTTGGCGAGGATTGTGCTCTCTCTATCTCTCTCTC TCCCTCTCTCTCGCTCTCCCTCTCTCTTGCTGTGTCTTCGTCGGCGGTGT TGGTGTCTTGAAGCCGTGCGGTCGTGCTCTGCTTTCTGTCGTGTGGGGGG CAGGCCGTGCGATGGATGGTGTGGGGTCAGAGGTGGTGAGGGCTGGCAGG TCTTCTCGCTTTGATGGCCGCGGAAGCGAGCAGCGTGTCATGCTCCGGCT GAATACGTGTCCTCGAACCTTTTATGAGTCGCCTGTGACGGTGTTGGCGA GGTGCCCCGATTGCTGTTTAAGGGGCCCGATTTTGTCGCCTGTACTATCA CCACGGCAACCGAGACATGCCCCCCTCCTGCCACACCTTTCCCTACACCC TCGTGTTCTTCCTTGCTGTTGTAGTGAAAACCCCAGTCTTCAAGCACGCC TCGGTGCTCACGCACACAGCAACCCGATGGAAAACAAGCCACATGTCGCA CATTTCGCACGGCCCAGGTAGTTTTAACCCCTTCGCATCCAGTTTCGATC TTGCTGACGACCCTTCGTGTACTACTGTATGCGCGCTCTCCTCCCCTCCG CGGAAACCGGGGACCGCTGCGGATGCTGCGCTCACACGGACGCACGCGAG TGCAGCTGAGCCGAGAGACCAAGAAGCAGCAGCGCCGGACGTTCCGGCAG CTGTTCGCGACGATCGGGGAGAACGAGCCCCCCGAGGAGGTGGTGAGCCT GCAGAACGGCAGCCTCACGGTGGCCGACTGGGCCCACATCAAGCAGCTCA ACGCCCTCCGCAGCTGTCTGCAGAGCGGCTTCCAGGTGAGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12441:14..3754-

>mRNA_E-fasciculatus_F_contig12441.1875.1 ID=mRNA_E-fasciculatus_F_contig12441.1875.1|Name=mRNA_E-fasciculatus_F_contig12441.1875.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2034bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12441:14..3754- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AACAGGGCGTCCACGCGCGAGGCCGGCTTGAGGGCGGTCATCAAGTTCAT
GCTTCACTCTCCGGACCTCGAGCCCGTGCTGGCCATGCGGGAGACGGTGC
TCTCGACCCTGATCGGCGTTGCTCGCGGGAAGGGCACGGAGTCGCAGAAC
AGGGCGTCCACGCGCGAGGCCGGCTTGAGGGCGGTCATCAAGTTCATGCT
TCACTCTCCGGACCTCGAGCCCGTGCTGGCCATGCGGGAGACGGTGCTCT
CGACCCTGATCGGCGTTGCTCGCGGGAAGGGCACGGAGTCGCAGGGGGTT
CACGCGCTGCGAGCGCTGTCAGTGCTGTGCGTGTGCATCGGGCCGGAGGA
GGAGGAGGCGTTTAGGGCCCTGCGGCGGCCGCTGCGGAGCCTCATCACCC
GCAGCCGCCACGAAGGGGTGAGGGTCGGGGCGGTGCGCACCCTGGCGCTG
GCGTGCTTCATCTGCTCGAGCGACGACGACAACACTAGCGAGACCCTGGA
CCTTTTGGCCGACGTGTTCAGCAGGACGAGCGATGGGGGTTCACGCGCTG
CGAGCGCTGTCAGTGCTGTGCGTGTGCATCGGGCCGGAGGAGGAGGAGGC
GTTTAGGGCCCTGCGGCGGCCGCTGCGGAGCCTCATCACCCGCAGCCGCC
ACGAAGGGGTGAGGGTCGGGGCGGTGCGCACCCTGGCGCTGGCGTGCTTC
ATCTGCTCGAGCGACGACGACAACACTAGCGAGACCCTGGACCTTTTGGC
CGACGTGTTCAGCAGGACGAGCGATGGCTTAGAGGTGCCGGACAAGGTGT
GCGCCGCGGCGCTGTCGGGGTGGGGGCTCCTGGCCACCACGGTGTCGCGG
TCCTGGGTGGCGACGCGCATGACGAAGCAGCACCTCCGAGTGTTCAGGGA
GCTGCTCTCGAGCCCGGACATGGACGTGCGCATGGAGGCCGGAGAGAACC
TCGCCCTCCTCCACGAGAGCCGAATCATCTTGGGGCTGGTTGGCGGCGGC
GGGGAAGGGGGGTCCGCGGATTGGTCCGGCGGAGGGGGGGGCGCTGCGGA
GGCGACGGAGGGCGGGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
ATGAAGGGGACCAGGATGATGATGATGGGGCGGCGGAGATGGAGGCGATG
GATTTGACGGTGCTGTGGGAGGAGGTGGTGGAGGAGATCAAGGGGTTCAT
CACCGACAGCAGCAAGAAGGCTTAGAGGTGCCGGACAAGGTGTGCGCCGC
GGCGCTGTCGGGGTGGGGGCTCCTGGCCACCACGGTGTCGCGGTCCTGGG
TGGCGACGCGCATGACGAAGCAGCACCTCCGAGTGTTCAGGGAGCTGCTC
TCGAGCCCGGACATGGACGTGCGCATGGAGGCCGGAGAGAACCTCGCCCT
CCTCCACGAGAGCCGAATCATCTTGGGGCTGGTTGGCGGCGGCGGGGAAG
GGGGGTCCGCGGATTGGTCCGGCGGAGGGGGGGGCGCTGCGGAGGCGACG
GAGGGCGGGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGAAGG
GGACCAGGATGATGATGATGGGGCGGCGGAGATGGAGGCGATGGATTTGA
CGGTGCTGTGGGAGGAGGTGGTGGAGGAGATCAAGGGGTTCATCACCGAC
AGCAGCAAGAAGCTGAGCCGAGAGACCAAGAAGCAGCAGCGCCGGACGTT
CCGGCAGCTGTTCGCGACGATCGGGGAGAACGAGCCCCCCGAGGAGGTGG
TGAGCCTGCAGAACGGCAGCCTCACGGTGGCCGACTGGGCCCACATCAAG
CAGCTCAACGCCCTCCGCAGCTGTCTGCAGAGCGGCTTCCAGGTGAGACT
GAGCCGAGAGACCAAGAAGCAGCAGCGCCGGACGTTCCGGCAGCTGTTCG
CGACGATCGGGGAGAACGAGCCCCCCGAGGAGGTGGTGAGCCTGCAGAAC
GGCAGCCTCACGGTGGCCGACTGGGCCCACATCAAGCAGCTCAACGCCCT
CCGCAGCTGTCTGCAGAGCGGCTTCCAGGTGAGA
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