prot_E-fasciculatus_F_contig12431.1872.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12431.1872.1
Unique Nameprot_E-fasciculatus_F_contig12431.1872.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length140
Homology
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A6H5JNU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNU2_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 3.750e-83
Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 0
Query:    1 GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHA+TGSEDKVLRMWPLDFSDFLMEAAHESPVVSVC S+DGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR
Sbjct:  888 GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAITGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCFSKDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 1027          
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A835YLQ5_9STRA (DUF667 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLQ5_9STRA)

HSP 1 Score: 160 bits (404), Expect = 9.130e-43
Identity = 82/137 (59.85%), Postives = 102/137 (74.45%), Query Frame = 0
Query:    4 VVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            VV VS+RAGTV QV Y +R LLCVL+LH+GPI +L V+   A T S+D  LR+WPLDF+D+LMEA HE+PV ++  S DGL+LAVGT +GS+ VLDV+TH Y+T LRSHRG V A A DP   R + ATV  D T+R
Sbjct:  723 VVLVSTRAGTVFQVDYESRALLCVLRLHSGPIRALAVHAGFAATASDDGWLRLWPLDFNDYLMEAKHEAPVTAIALSADGLRLAVGTDSGSLGVLDVVTHKYSTLLRSHRGAVAAIACDPC--RGEAATVGADGTVR 857          
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A250WPV0_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WPV0_9CHLO)

HSP 1 Score: 145 bits (366), Expect = 1.190e-37
Identity = 73/140 (52.14%), Postives = 99/140 (70.71%), Query Frame = 0
Query:    1 GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            GP  VYVSS +G V +++Y TR LLCV QLH+  I SL V++   VTGS+DK+LR+WP+DFSDFLMEA HE+ V SV  ++DGL++ +GT +G++ +LD+ T  Y T LRSH G V   AID +  +  + TVS D +IR
Sbjct:  484 GPCRVYVSSASGAVFEINYRTRALLCVYQLHSSAINSLVVHDSFCVTGSDDKLLRVWPMDFSDFLMEADHEASVTSVGVAKDGLRVCIGTESGALGILDIPTQRYRTLLRSHTGTVMGVAIDHNSSQ--YCTVSTDGSIR 621          
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: F0Y7G3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7G3_AURAN)

HSP 1 Score: 142 bits (359), Expect = 1.010e-36
Identity = 74/140 (52.86%), Postives = 97/140 (69.29%), Query Frame = 0
Query:    1 GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            G +VV+V++ +G VLQ+SY  R LLCVL+LH+GPI  ++    + VT S+D  +R+WPLDFSD+LMEA HE+PVV V  + DGLK+A GT+ GS+ VLDV  HGY+T +RSH G V   A      R  FAT  +D TIR
Sbjct:  147 GDKVVFVAATSGHVLQLSYAQRALLCVLRLHDGPIRRVDATPGYVVTASDDCYVRLWPLDFSDYLMEAKHEAPVVDVAVAPDGLKIACGTSRGSLGVLDVSAHGYSTLVRSHVGAVFDVAHADVGGR--FATCGKDGTIR 284          
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A0L0D4U4_THETB (WD repeat-containing protein 90 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D4U4_THETB)

HSP 1 Score: 140 bits (354), Expect = 4.920e-36
Identity = 72/136 (52.94%), Postives = 93/136 (68.38%), Query Frame = 0
Query:    5 VYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            VYV+S +G V Q++Y T  L  + QLHNGPI SL V + + V+GS+D  LR+WPLDFSDF +EA HES V SV  S D LK+  GTAAGS+  LD++T  +TT LRSH  GV   A+ P +  D FATV+ D ++R
Sbjct:  595 VYVASDSGMVFQIAYSTVELEAIYQLHNGPIRSLSVVDGYCVSGSDDGFLRVWPLDFSDFFLEAEHESAVTSVAISYDCLKILCGTAAGSLGALDILTQSFTTFLRSHTAGVHDLAVSPKD--DSFATVAGDGSVR 728          
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A8J4ESL9_9CHLO (DUF667 domain-containing protein n=5 Tax=Volvox TaxID=3066 RepID=A0A8J4ESL9_9CHLO)

HSP 1 Score: 138 bits (347), Expect = 4.340e-35
Identity = 69/136 (50.74%), Postives = 89/136 (65.44%), Query Frame = 0
Query:    5 VYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            VYVSS +G V QV Y TRNL C+ QLH+  I  L V +  A+TG +D++LR WPLDF D+L+EA HE  V  +  S D L++A+GT  G++  L +  H Y T LRSH G V A A+DP+  RD F TVS D T+R
Sbjct:  648 VYVSSASGAVFQVDYTTRNLDCIYQLHSAAINCLLVADGLAITGGDDRLLRAWPLDFKDYLLEAEHEGAVTGLALSPDALRVAIGTETGALGCLHIPDHSYMTLLRSHSGAVNAVAVDPN--RDHFCTVSTDGTLR 781          
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: D8TH40_VOLCA (Bromo domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TH40_VOLCA)

HSP 1 Score: 137 bits (344), Expect = 1.110e-34
Identity = 69/136 (50.74%), Postives = 88/136 (64.71%), Query Frame = 0
Query:    5 VYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            VYVSS +G V QV Y TRNL C+ QLH   I  L V +  A+TG +D++LR WPLDF D+L+EA HE  V  +  S D L++A+GT  G++  L +  H Y T LRSH G V A A+DP+  RD F TVS D T+R
Sbjct: 1205 VYVSSASGAVFQVDYTTRNLDCIYQLHASAINCLLVADGLAITGGDDRLLRAWPLDFKDYLLEAEHEGSVTGLALSPDALRVAIGTETGALGCLHIPDHSYMTLLRSHSGSVNAVAVDPN--RDHFCTVSTDGTLR 1338          
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A418ARZ7_9STRA (DUF667 domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ARZ7_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.740e-33
Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 0
Query:    3 RVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            R +YV+S  GTVL + Y +  L CV +LHNGPI  L VNE   VTGSED  +R+WPLDFSDF +EAAHE+PV  +  S DGL   +G   G+I VL++ T  YT+ +R+H   +TA  + P    D F + S+D TIR
Sbjct:  455 RPLYVASSHGTVLVIDYDSMALTCVYKLHNGPIHCLRVNEGFCVTGSEDGYIRVWPLDFSDFYLEAAHEAPVACLDLSVDGLHALIGCENGTIGVLEIGTQRYTSVVRAHTSSITAITLSPRS--DSFVSTSKDGTIR 590          
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A024TNJ4_9STRA (DUF667 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNJ4_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.780e-33
Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 0
Query:    3 RVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            R +YV+S  GTVL + Y +  L CV +LHNGPI  L VNE   VTGSED  +R+WPLDFSDF +EAAHE+PV  +  S DGL   +G   G+I VL++ T  YT+ +R+H   +TA  + P    D F + S+D TIR
Sbjct:  577 RPLYVASSHGTVLVIDYDSMALTCVYKLHNGPIHCLRVNEGFCVTGSEDGYIRVWPLDFSDFYLEAAHEAPVACLDLSVDGLHALIGCENGTIGVLEIGTQRYTSVVRAHTSSITAITLSPRS--DSFVSTSKDGTIR 712          
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A2J8A864_9CHLO (WD repeat domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A864_9CHLO)

HSP 1 Score: 133 bits (335), Expect = 1.790e-33
Identity = 68/136 (50.00%), Postives = 87/136 (63.97%), Query Frame = 0
Query:    5 VYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 140
            VYV+S +G + QV Y TRNL C+ QLH+  I  L + +  A+TG ED++LR WPLDF D+L+EA HE  V  +  S D L++ VGT  G +  L +  H Y+T LRSH G V A A DPS  RD F TVS D T+R
Sbjct:  644 VYVASASGALFQVDYTTRNLDCIYQLHSAAITCLLIADGLALTGGEDRLLRAWPLDFRDYLLEAEHEGSVTGLALSPDALRVVVGTENGVLGCLQIPNHSYSTLLRSHCGPVNAVAADPS--RDQFCTVSSDGTLR 777          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNU2_9PHAE3.750e-8397.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLQ5_9STRA9.130e-4359.85DUF667 domain-containing protein n=1 Tax=Tribonema... [more]
A0A250WPV0_9CHLO1.190e-3752.14Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
F0Y7G3_AURAN1.010e-3652.86Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A0L0D4U4_THETB4.920e-3652.94WD repeat-containing protein 90 n=1 Tax=Thecamonas... [more]
A0A8J4ESL9_9CHLO4.340e-3550.74DUF667 domain-containing protein n=5 Tax=Volvox Ta... [more]
D8TH40_VOLCA1.110e-3450.74Bromo domain-containing protein n=1 Tax=Volvox car... [more]
A0A418ARZ7_9STRA1.740e-3349.28DUF667 domain-containing protein (Fragment) n=1 Ta... [more]
A0A024TNJ4_9STRA1.780e-3349.28DUF667 domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A2J8A864_9CHLO1.790e-3350.00WD repeat domain-containing protein n=1 Tax=Tetrab... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 21..58
e-value: 0.0026
score: 27.0
coord: 102..138
e-value: 320.0
score: 1.2
coord: 61..99
e-value: 3.1
score: 13.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 25..57
e-value: 0.23
score: 12.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 28..67
score: 9.773
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..140
e-value: 2.5E-21
score: 77.6
NoneNo IPR availablePANTHERPTHR13720:SF44coord: 5..140
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 5..140
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 28..140
score: 12.13
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12431contigE-fasciculatus_F_contig12431:2235..3636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12431.1872.1mRNA_E-fasciculatus_F_contig12431.1872.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12431 2235..3636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12431.1872.1 ID=prot_E-fasciculatus_F_contig12431.1872.1|Name=mRNA_E-fasciculatus_F_contig12431.1872.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=140bp
GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSE
DKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDV
MTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat