mRNA_E-fasciculatus_F_contig12431.1872.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A6H5JNU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNU2_9PHAE) HSP 1 Score: 275 bits (704), Expect = 3.750e-83 Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 1
Query: 1 GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHA+TGSEDKVLRMWPLDFSDFLMEAAHESPVVSVC S+DGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR
Sbjct: 888 GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAITGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCFSKDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 1027
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A835YLQ5_9STRA (DUF667 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLQ5_9STRA) HSP 1 Score: 160 bits (404), Expect = 9.130e-43 Identity = 82/137 (59.85%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 10 VVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
VV VS+RAGTV QV Y +R LLCVL+LH+GPI +L V+ A T S+D LR+WPLDF+D+LMEA HE+PV ++ S DGL+LAVGT +GS+ VLDV+TH Y+T LRSHRG V A A DP R + ATV D T+R
Sbjct: 723 VVLVSTRAGTVFQVDYESRALLCVLRLHSGPIRALAVHAGFAATASDDGWLRLWPLDFNDYLMEAKHEAPVTAIALSADGLRLAVGTDSGSLGVLDVVTHKYSTLLRSHRGAVAAIACDPC--RGEAATVGADGTVR 857
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A250WPV0_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WPV0_9CHLO) HSP 1 Score: 145 bits (366), Expect = 1.190e-37 Identity = 73/140 (52.14%), Postives = 99/140 (70.71%), Query Frame = 1
Query: 1 GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
GP VYVSS +G V +++Y TR LLCV QLH+ I SL V++ VTGS+DK+LR+WP+DFSDFLMEA HE+ V SV ++DGL++ +GT +G++ +LD+ T Y T LRSH G V AID + + + TVS D +IR
Sbjct: 484 GPCRVYVSSASGAVFEINYRTRALLCVYQLHSSAINSLVVHDSFCVTGSDDKLLRVWPMDFSDFLMEADHEASVTSVGVAKDGLRVCIGTESGALGILDIPTQRYRTLLRSHTGTVMGVAIDHNSSQ--YCTVSTDGSIR 621
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: F0Y7G3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7G3_AURAN) HSP 1 Score: 142 bits (359), Expect = 1.010e-36 Identity = 74/140 (52.86%), Postives = 97/140 (69.29%), Query Frame = 1
Query: 1 GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
G +VV+V++ +G VLQ+SY R LLCVL+LH+GPI ++ + VT S+D +R+WPLDFSD+LMEA HE+PVV V + DGLK+A GT+ GS+ VLDV HGY+T +RSH G V A R FAT +D TIR
Sbjct: 147 GDKVVFVAATSGHVLQLSYAQRALLCVLRLHDGPIRRVDATPGYVVTASDDCYVRLWPLDFSDYLMEAKHEAPVVDVAVAPDGLKIACGTSRGSLGVLDVSAHGYSTLVRSHVGAVFDVAHADVGGR--FATCGKDGTIR 284
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A0L0D4U4_THETB (WD repeat-containing protein 90 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D4U4_THETB) HSP 1 Score: 140 bits (354), Expect = 4.920e-36 Identity = 72/136 (52.94%), Postives = 93/136 (68.38%), Query Frame = 1
Query: 13 VYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
VYV+S +G V Q++Y T L + QLHNGPI SL V + + V+GS+D LR+WPLDFSDF +EA HES V SV S D LK+ GTAAGS+ LD++T +TT LRSH GV A+ P + D FATV+ D ++R
Sbjct: 595 VYVASDSGMVFQIAYSTVELEAIYQLHNGPIRSLSVVDGYCVSGSDDGFLRVWPLDFSDFFLEAEHESAVTSVAISYDCLKILCGTAAGSLGALDILTQSFTTFLRSHTAGVHDLAVSPKD--DSFATVAGDGSVR 728
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A8J4ESL9_9CHLO (DUF667 domain-containing protein n=5 Tax=Volvox TaxID=3066 RepID=A0A8J4ESL9_9CHLO) HSP 1 Score: 138 bits (347), Expect = 4.340e-35 Identity = 69/136 (50.74%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 13 VYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
VYVSS +G V QV Y TRNL C+ QLH+ I L V + A+TG +D++LR WPLDF D+L+EA HE V + S D L++A+GT G++ L + H Y T LRSH G V A A+DP+ RD F TVS D T+R
Sbjct: 648 VYVSSASGAVFQVDYTTRNLDCIYQLHSAAINCLLVADGLAITGGDDRLLRAWPLDFKDYLLEAEHEGAVTGLALSPDALRVAIGTETGALGCLHIPDHSYMTLLRSHSGAVNAVAVDPN--RDHFCTVSTDGTLR 781
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: D8TH40_VOLCA (Bromo domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TH40_VOLCA) HSP 1 Score: 137 bits (344), Expect = 1.110e-34 Identity = 69/136 (50.74%), Postives = 88/136 (64.71%), Query Frame = 1
Query: 13 VYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
VYVSS +G V QV Y TRNL C+ QLH I L V + A+TG +D++LR WPLDF D+L+EA HE V + S D L++A+GT G++ L + H Y T LRSH G V A A+DP+ RD F TVS D T+R
Sbjct: 1205 VYVSSASGAVFQVDYTTRNLDCIYQLHASAINCLLVADGLAITGGDDRLLRAWPLDFKDYLLEAEHEGSVTGLALSPDALRVAIGTETGALGCLHIPDHSYMTLLRSHSGSVNAVAVDPN--RDHFCTVSTDGTLR 1338
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A418ARZ7_9STRA (DUF667 domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ARZ7_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.740e-33 Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 7 RVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
R +YV+S GTVL + Y + L CV +LHNGPI L VNE VTGSED +R+WPLDFSDF +EAAHE+PV + S DGL +G G+I VL++ T YT+ +R+H +TA + P D F + S+D TIR
Sbjct: 455 RPLYVASSHGTVLVIDYDSMALTCVYKLHNGPIHCLRVNEGFCVTGSEDGYIRVWPLDFSDFYLEAAHEAPVACLDLSVDGLHALIGCENGTIGVLEIGTQRYTSVVRAHTSSITAITLSPRS--DSFVSTSKDGTIR 590
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A024TNJ4_9STRA (DUF667 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNJ4_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.780e-33 Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 7 RVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
R +YV+S GTVL + Y + L CV +LHNGPI L VNE VTGSED +R+WPLDFSDF +EAAHE+PV + S DGL +G G+I VL++ T YT+ +R+H +TA + P D F + S+D TIR
Sbjct: 577 RPLYVASSHGTVLVIDYDSMALTCVYKLHNGPIHCLRVNEGFCVTGSEDGYIRVWPLDFSDFYLEAAHEAPVACLDLSVDGLHALIGCENGTIGVLEIGTQRYTSVVRAHTSSITAITLSPRS--DSFVSTSKDGTIR 712
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Match: A0A2J8A864_9CHLO (WD repeat domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A864_9CHLO) HSP 1 Score: 133 bits (335), Expect = 1.790e-33 Identity = 68/136 (50.00%), Postives = 87/136 (63.97%), Query Frame = 1
Query: 13 VYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCSSQDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 420
VYV+S +G + QV Y TRNL C+ QLH+ I L + + A+TG ED++LR WPLDF D+L+EA HE V + S D L++ VGT G + L + H Y+T LRSH G V A A DPS RD F TVS D T+R
Sbjct: 644 VYVASASGALFQVDYTTRNLDCIYQLHSAAITCLLIADGLALTGGEDRLLRAWPLDFRDYLLEAEHEGSVTGLALSPDALRVVVGTENGVLGCLQIPNHSYSTLLRSHCGPVNAVAADPS--RDQFCTVSSDGTLR 777 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12431.1872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12431.1872.1 >prot_E-fasciculatus_F_contig12431.1872.1 ID=prot_E-fasciculatus_F_contig12431.1872.1|Name=mRNA_E-fasciculatus_F_contig12431.1872.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=140bp GPRVVYVSSRAGTVLQVSYHTRNLLCVLQLHNGPILSLEVNEDHAVTGSEback to top mRNA from alignment at E-fasciculatus_F_contig12431:2235..3636+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12431.1872.1 ID=mRNA_E-fasciculatus_F_contig12431.1872.1|Name=mRNA_E-fasciculatus_F_contig12431.1872.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1402bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12431:2235..3636+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12431:2235..3636+ >mRNA_E-fasciculatus_F_contig12431.1872.1 ID=mRNA_E-fasciculatus_F_contig12431.1872.1|Name=mRNA_E-fasciculatus_F_contig12431.1872.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=840bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12431:2235..3636+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |