mRNA_E-fasciculatus_F_contig12428.1868.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12428.1868.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE) HSP 1 Score: 560 bits (1442), Expect = 2.450e-187 Identity = 362/488 (74.18%), Postives = 376/488 (77.05%), Query Frame = 2
Query: 221 RPGTAAP-EPYRRRTLEPPPGHWASPSDPFLRSSQQGEAALAQGKRVRLSPPTLGSGAAGSGG---RPVMRPGPDYYPSPAPSPRARETAGRPHERPREVDPESSLLSLPPPREPPDPTAGFSFHPAANRPTWRRGSTWESGSPGGXXXXXXXGRPVDRNDPRAYHQYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------RGASLGGDRRYRSFEREAGEDG--RGRGVVEWPLPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXHGFDRHLPLERPLMGGGRQGGGTRHDMLLGAPSSPRDEQGYAAARGGGVGGADGVAYEHPAGRPRWAGGGGDQMGLPGRGSRDHRDYEEEQQRVERGRQDWEEGRRGFWPQGPLRGGVADGGGGRGGGTAPFQWERERAEEGRRHHLTXXXXXXXXXLPTSSPRAMHTGXXXXXXXXXXXXXXXXHQRGS-ERGESPAPARDGGEEDQKPDVGRHQADE 1645
RPG A EPYRRRT E PPGHWASPSDPFLRS QQGEAALAQGKRVRLSPPT GSGAAG G RPVMRPG DYYPSPA SPRA E AGRPHERPRE+DPESS+LSLPPPREPPDPTAGFSFHPAANRP+WRRGSTWESGSPGG GRPVDRNDPRAYHQYPP XXXXXXX RGASLGGDRRYR+F+REAGEDG RGRGVVEWPLPHGXXXXXXXXX HGFDRHLPLERPLMGGGRQG G +HDMLLGAPS PRD+QGY AARGG GGADG AYE+P+GRPRWAGGGGDQMGLPGRGSRDHRD+E+EQQ+VERGRQDW+ GRRGFWPQG LRGGV DGG GRGG PFQWERER EEGRRH XXXXXXXXX XXXXXXXXXXXXXXXX ER ESP P RDGGEED+K DVGRHQADE
Sbjct: 259 RPGAPAMREPYRRRTPELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTFGSGAAGGSGGGSRPVMRPGADYYPSPATSPRASEMAGRPHERPRELDPESSVLSLPPPREPPDPTAGFSFHPAANRPSWRRGSTWESGSPGGGGGD---GRPVDRNDPRAYHQYPPPQLGSFESSDRAPSSSSWSSPGXXXXXXXXXXXXGRGASLGGDRRYRNFDREAGEDGQGRGRGVVEWPLPHGXXXXXXXXXDPYHEQVELPPPP-----HGFDRHLPLERPLMGGGRQGEG-KHDMLLGAPSPPRDKQGY-AARGGVGGGADGGAYEYPSGRPRWAGGGGDQMGLPGRGSRDHRDFEQEQQQVERGRQDWDGGRRGFWPQGSLRGGVGDGGSGRGGAAVPFQWERERVEEGRRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREESPVPGRDGGEEDRKSDVGRHQADE 736
BLAST of mRNA_E-fasciculatus_F_contig12428.1868.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI) HSP 1 Score: 540 bits (1391), Expect = 1.320e-179 Identity = 367/491 (74.75%), Postives = 376/491 (76.58%), Query Frame = 2
Query: 221 RPGT-AAPEPYRRRTLEPPPGHWASPSDPFLRSSQQGEAALAQGKRVRLSPPTLGSGAAGSGG---------RPVMRPGPDYYPSPAPSPRARETAGRPHERPREVDPESSLLSLPPPREPPDPTAGFSFHPAANRPTWRRGSTWESGSPGGXXXXXXXGRPVDRNDPRAYHQYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RGASLGGDRRYRSFEREAGEDGRGRG--VVEWPLPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXHGFDRHLPLERPLMGGGRQGGGTRHDMLLGAPSSPRDEQGYAAARGGGVGGADGVAYEHPAGRPRWAGGGGDQMGLPGRGSRDHRDYEEEQQRVERGRQDWEEGRRGFWPQGPLRGGVADGGGGRGGGT-APFQWERERAEEGRRHHLTXXXXXXXXXLPTSSPRAMHTGXXXXXXXXXXXXXXXXHQRGSERGESPAPARDGGEEDQKPDVGRHQADE 1645
RPG AAPEPYRRRTLE PPGHWASPSDPFLRS QQGEAALAQGKRVRLSPPTLGSGAA R VMRPG DYYPSPA SPRARE AGRPHERPRE+DPESSLLSLPPPREPPDPTAGFSFHPAANRP+WRRGSTWESGSPGG GRPVDRNDPRAYHQYPP XXXXXXXXXXXXXXXXX RGASLG DRRYR+F+REAGEDG+GRG VVEWPLPHGXXXXXXXXX HGFDRHLPLERPLMGGGRQG G RHDMLLGAPS PRDEQGYAA GADG AYEHP+GR RWAGGGGDQ+GLPGRGSRDHRDYE+EQQRVERGRQDWE GRRGFWPQGPLRGGV DG APFQWERER EEGRRH XXXX LP+SSPRAMHTGXXXXXXXXXXXXXXXX ER ESP P RDG RHQ DE
Sbjct: 270 RPGVPAAPEPYRRRTLELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTLGSGAAXXXXXXXXXXXXXRSVMRPGADYYPSPATSPRAREMAGRPHERPRELDPESSLLSLPPPREPPDPTAGFSFHPAANRPSWRRGSTWESGSPGGGGD----GRPVDRNDPRAYHQYPPQQLGSFESSDRPXXXXXXXXXXXXXXXXXXXXRGASLG-DRRYRNFDREAGEDGQGRGRSVVEWPLPHGXXXXXXXXXDPYHERVELPPPPP----HGFDRHLPLERPLMGGGRQGEG-RHDMLLGAPSPPRDEQGYAAR------GADGGAYEHPSGRARWAGGGGDQVGLPGRGSRDHRDYEQEQQRVERGRQDWEGGRRGFWPQGPLRGGVGDGXXXXXXXXXAPFQWERERVEEGRRHXXXXXXXGGVP-LPSSSPRAMHTGXXXXXXXXXXXXXXXXXX--GEREESPVPGRDGXXXXXXXXXXRHQGDE 741 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12428.1868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12428.1868.1 >prot_E-fasciculatus_F_contig12428.1868.1 ID=prot_E-fasciculatus_F_contig12428.1868.1|Name=mRNA_E-fasciculatus_F_contig12428.1868.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=416bp GTPARRGGGQGGGAGGRQREGVSSSSAHGVRADHGGGALATTAGARLPPPback to top mRNA from alignment at E-fasciculatus_F_contig12428:18..2774+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12428.1868.1 ID=mRNA_E-fasciculatus_F_contig12428.1868.1|Name=mRNA_E-fasciculatus_F_contig12428.1868.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2757bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12428:18..2774+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12428:18..2774+ >mRNA_E-fasciculatus_F_contig12428.1868.1 ID=mRNA_E-fasciculatus_F_contig12428.1868.1|Name=mRNA_E-fasciculatus_F_contig12428.1868.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2496bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12428:18..2774+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |