prot_E-fasciculatus_F_contig12425.1866.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12425.1866.1
Unique Nameprot_E-fasciculatus_F_contig12425.1866.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length147
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12425.1866.1 vs. uniprot
Match: D7FZI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI8_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 7.180e-12
Identity = 90/149 (60.40%), Postives = 91/149 (61.07%), Query Frame = 0 
Query:    1 PGIG-GDSRRGNGRKWSSSDGXXXXXXXXGLFAVGEASAARYVPAATISCDGVTPLPAGRGGGPREAGSRRGSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----PHSSSLSASSPFPNLLDGADDSASS 144
            PG G G SR  NGRK   S  XXXXXXXX  FAVGEAS AR V AAT  CDGVTPLPAGRGGGPREAG+      XXXXXXXXX         XXX                  XXXXXX    PHS SLSASSPF NLLDG DDS SS
Sbjct:  215 PGAGVGGSRWSNGRK---SXXXXXXXXXXXSFAVGEASVARPV-AATFGCDGVTPLPAGRGGGPREAGAXXXXXXXXXXXXXXXSAGREGRAGXXXGEGVSGGRADYHSLCFSSXXXXXXXXXXPHSGSLSASSPFLNLLDGGDDSTSS 359
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BLAST of mRNA_E-fasciculatus_F_contig12425.1866.1 vs. uniprot
Match: A0A6H5KEK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK5_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 4.090e-10
Identity = 85/152 (55.92%), Postives = 86/152 (56.58%), Query Frame = 0 
Query:    1 PGIG-GDSRRGNGRKWSSSDGXXXXXXXXGLFAVGEASAARYVPAATISCDGVTPLPAGRGGGPREAGSRRGSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP----HSSSLSASSPFPNLLDGA-DDSASSTS 146
            PG G GDSR GNGRK        XXXXXX  +A GEAS AR V AA I CDGVTPLPA RGGGPRE G       XXXXXXXXX                              XXXXXX     HSSSLSASSPFPNLLDG  DDS SSTS
Sbjct:  771 PGAGVGDSRWGNGRK-------SXXXXXXXPYAAGEASVARSV-AAAIGCDGVTPLPAERGGGPREDGXXXXXXXXXXXXXXXXSAGRGGRGASAVGERVPGGRADYHSLCFSSXXXXXXXXXXXHSSSLSASSPFPNLLDGGVDDSTSSTS 914
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12425.1866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZI8_ECTSI7.180e-1260.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEK5_9PHAE4.090e-1055.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12425contigE-fasciculatus_F_contig12425:1..441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12425.1866.1mRNA_E-fasciculatus_F_contig12425.1866.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12425 1..441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12425.1866.1 ID=prot_E-fasciculatus_F_contig12425.1866.1|Name=mRNA_E-fasciculatus_F_contig12425.1866.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=147bp
PGIGGDSRRGNGRKWSSSDGGGSGSGGGGLFAVGEASAARYVPAATISCD
GVTPLPAGRGGGPREAGSRRGSFSSSYGGGGGSSAGRGGGGSGGRADYHS
LCFSSSSSSSGNTTAGNTTPHSSSLSASSPFPNLLDGADDSASSTS*
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