mRNA_E-fasciculatus_F_contig12422.1864.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12422.1864.1 vs. uniprot
Match: D7FY03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY03_ECTSI) HSP 1 Score: 323 bits (829), Expect = 1.440e-93 Identity = 261/395 (66.08%), Postives = 270/395 (68.35%), Query Frame = 1
Query: 505 AQDDEAFPMSGGGTRSLSPSPALHRHNMQWARQSPVGIXXXXXXVKNGSGPRRSISXXXXXXSGRRSSNSAFSLGTGPVRGPGSWTRGGSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------EKGRGRTAERAGQGCARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGVGASGGTDVCSGTAAAVA---KPDEASWAGEDDKAGGGASTVNPGREASYGTVTSSVFCSGVGDARGSLLASFNTLPRKSLESTYFESNASVAVAVPSAXXXXXXXXXXXXXXTAAGEPVSAAGGDTGAGRTPAGTGGQIEEGGVEAAEXXXXXXXXXXXXXXXXXXXXXXXXXRARGESGADMVVGHAADPAALVRPPRVGD 1659
A DE+FP+SGGGTRSLSPSPALHRHNMQWARQSP G +KNG G XXXXXX RRSSNSAFSLGTGPVRGPGSWTRG XXXXXXXXXXXX XXXXXXXXXXXXXXXXX E+GRGRTAERA QGCARAP V VGASGGTDVC G AA+VA KP+E SWAGEDDK GG AST NPGREASYGTVTSS FCSGVGDARGSLLASFNTLPRKSLESTYFESNASVAV VPSA XXXXXXXXXX AGEP+SA+GGDTGAGRTPA TGGQ EG V+AAE XXX GADMVVGHA DPAALVRPPRVGD
Sbjct: 245 AASDESFPVSGGGTRSLSPSPALHRHNMQWARQSPAGTGAGAGAMKNG-GXXXXXXXXXXXXXXRRSSNSAFSLGTGPVRGPGSWTRGXXXXXXXXXXXXXXXXVSSGXXXXXXXXXXXXXXXXXXXXXXXPEQGRGRTAERAEQGCARAPPQQLTSAPEEDEAENEERGESPVQPRVGVDDE------VTEVGASGGTDVCPGAAASVAATAKPEEKSWAGEDDKVGGAASTANPGREASYGTVTSSAFCSGVGDARGSLLASFNTLPRKSLESTYFESNASVAVTVPSASXXXXXXXXXXVVWGGAGEPLSASGGDTGAGRTPAATGGQ-GEGAVKAAEKEEEQAQGPKKGGKSGGGGRSRXXXXMARGPGADMVVGHAVDPAALVRPPRVGD 631 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12422.1864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12422.1864.1 >prot_E-fasciculatus_F_contig12422.1864.1 ID=prot_E-fasciculatus_F_contig12422.1864.1|Name=mRNA_E-fasciculatus_F_contig12422.1864.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=553bp TRGTARSSAGAPWMRKPGSWTTSRKDYHPRAHGACRPHQSGLRGPGEAAAback to top mRNA from alignment at E-fasciculatus_F_contig12422:1..3944- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12422.1864.1 ID=mRNA_E-fasciculatus_F_contig12422.1864.1|Name=mRNA_E-fasciculatus_F_contig12422.1864.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3944bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12422:1..3944- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12422:1..3944- >mRNA_E-fasciculatus_F_contig12422.1864.1 ID=mRNA_E-fasciculatus_F_contig12422.1864.1|Name=mRNA_E-fasciculatus_F_contig12422.1864.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3318bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12422:1..3944- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |