prot_E-fasciculatus_F_contig1242.1862.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1242.1862.1
Unique Nameprot_E-fasciculatus_F_contig1242.1862.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length602
Homology
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: D7FVL9_ECTSI (Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL9_ECTSI)

HSP 1 Score: 510 bits (1314), Expect = 2.460e-172
Identity = 316/398 (79.40%), Postives = 319/398 (80.15%), Query Frame = 0
Query:  115 MSSATAAAKRSPDAAATSPGYQGSDGASXXXXXXXXXXXXXXXXXXXXXXSEPAKAKEVVEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTPSENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAEDHHRRVQRQEQGQH-VKGGRGMDSNQGAGDQYGHQQGPHQGKXXXXXXXXXXXXXXXXXXXXXXXXXXXMFRGNNNQSMGPRHGGHMNPGFMNNMGMQAPPPDGSSPLTHQGMMGRYGMQVPGG 511
            MSSA  AAKRSPDAAATSPGYQGSDGAS                      SEPAKA EVVEP                                         GTPSENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVS+ARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQ      CRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAEDHHRRVQRQEQGQH VKGGRGMDS QGAGDQYG+QQGPHQGKXXXXXXXXXXXXXXXXXXXXXXXX   M+RGNN QSMGPRHGGHMNPGFMNNMGMQAPPPDGSSPLTHQGMMGRYGMQVP G
Sbjct:    1 MSSANVAAKRSPDAAATSPGYQGSDGASSNQQTTEQHAVSGAESQAAPA-SEPAKANEVVEPSTDAAADGAGEVAAGAKASEESGGDATPKEAEGGETAAAAAGTPSENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSIARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQ------CRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAEDHHRRVQRQEQGQHGVKGGRGMDSIQGAGDQYGNQQGPHQGKXXXXXXXXXXXXXXXXXXXXXXXX---MYRGNN-QSMGPRHGGHMNPGFMNNMGMQAPPPDGSSPLTHQGMMGRYGMQVPAG 387          
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: A0A7S3HB55_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HB55_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.080e-40
Identity = 81/170 (47.65%), Postives = 118/170 (69.41%), Query Frame = 0
Query:  224 NLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAEDHHRR 393
            NLI+NYLP  + ++ L+ +F   G++   KVV DR+T KS+GYGFVKF   + A  A   +NG  ID K +KVSVARP+S +I+N KLYVTNLP  +++  V+ +F+++G IIECR L D  +  ++  AFVQFD + +A +AL  +NG  L G ++GL+VK+AED H++
Sbjct:   37 NLIVNYLPHDIDDLALKGLFVEFGEIVSAKVVTDRNTKKSLGYGFVKFLCEDDAKLAIQRLNGFTIDNKCLKVSVARPASLEIRNCKLYVTNLPKDYTEIDVIHLFQEFGDIIECRVLKDRNSRTNKGVAFVQFDNKTQANNALS-LNGCQLEGGQRGLVVKYAEDQHKK 205          
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: A0A0S7GNH3_9TELE (ELAV-like protein n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GNH3_9TELE)

HSP 1 Score: 150 bits (379), Expect = 1.570e-37
Identity = 74/167 (44.31%), Postives = 110/167 (65.87%), Query Frame = 0
Query:  221 SENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFA 387
            S  NLI+NYLP  +++ ELR++F+  G++   K++ D+  G S+GYGFV F  +  A  A   +NG+ +  K IKVS ARPSS  IK++ LY++ LP   SQ  + ++F  +G+II  R LVD  + +SR  AF+++D R EA+DA+K +NGHV PG  + + VKFA
Sbjct:   54 SRTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNHSDAERAISTLNGLRLQSKTIKVSFARPSSDTIKDANLYISGLPRTLSQQDLEDMFSSFGRIINSRVLVDQASGLSRGVAFIRYDKRSEAEDAVKHLNGHVPPGGSEPITVKFA 220          
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: A0A667Y9X8_9TELE (ELAV-like protein n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667Y9X8_9TELE)

HSP 1 Score: 152 bits (384), Expect = 2.360e-37
Identity = 75/167 (44.91%), Postives = 112/167 (67.07%), Query Frame = 0
Query:  221 SENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFA 387
            +  NLI+NYLP ++++ ELR++F+  GD+   K++ D+  G S+GYGFV F     A  A   +NG+ +  K IKVS ARPSS  IK++ LY++ LP   +Q  + E+F +YG+II  R LVD  + +SR  AF++FD R EA+DA+K++NGH  PG+ + + VKFA
Sbjct:   63 ARTNLIVNYLPQNMSQEELRSLFSSIGDVESAKLIRDKVAGHSLGYGFVNFVNPNDAERAISTLNGLRLQSKTIKVSYARPSSDAIKDANLYISGLPKTVTQQDLEEMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRSEAEDAIKYLNGHKPPGSAEPITVKFA 229          
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: A0A8D3AU34_SCOMX (ELAV-like protein n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3AU34_SCOMX)

HSP 1 Score: 150 bits (379), Expect = 4.210e-37
Identity = 75/169 (44.38%), Postives = 111/169 (65.68%), Query Frame = 0
Query:  219 TPSENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFA 387
            T +  NLI+NYLP  +++ ELR++F+  GD+   K++ D+  G S+GYGFV F     A  A   +NG+ +  K IKVS ARPSS  IK++ LY++ LP   SQ ++ ++F ++G+II  R LVD  + +SR  AF++FD R EA+DA+K +NGH  PG  + + VKFA
Sbjct:   16 TDARTNLIVNYLPQSMSQDELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPNDAERAISTLNGLRLQSKTIKVSFARPSSDTIKDANLYISGLPRTLSQPELEDMFTRFGRIINSRVLVDQASGLSRGVAFIRFDKRSEAEDAVKHLNGHTPPGNSEPITVKFA 184          
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: A0A672KVF2_SINGR (ELAV-like protein n=4 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672KVF2_SINGR)

HSP 1 Score: 148 bits (374), Expect = 4.790e-37
Identity = 75/169 (44.38%), Postives = 114/169 (67.46%), Query Frame = 0
Query:  221 SENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAED 389
            S+ NLI+NYLP ++T+ EL+++F   G++   K+V D+ TG+S+GYGFV +   + A  A   +NG+ +  K IKVS ARPSS  I+++ LYV+ LP   +Q ++ ++F QYG+II  R LVD  T +SR   F++FD R EA++A+K +NG   PGA + + VKFA +
Sbjct:   42 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVEPKDAEKAINTLNGLRLQTKTIKVSFARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANN 210          
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: A0A7E6EAG9_9CHIR (ELAV-like protein n=4 Tax=Amniota TaxID=32524 RepID=A0A7E6EAG9_9CHIR)

HSP 1 Score: 148 bits (374), Expect = 5.180e-37
Identity = 73/164 (44.51%), Postives = 112/164 (68.29%), Query Frame = 0
Query:  224 NLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFA 387
            NLI+NYLP ++T+ ELR++F+  G++   K++ D+  G S+GYGFV + T + A  A   +NG+ +  K IKVS ARPSS+ IK++ LY++ LP + +Q  V ++F ++G+II  R LVD  T +SR  AF++FD R EA++A+   NGH  PG+ + + VKFA
Sbjct:   21 NLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAVNTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184          
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: A0A1A7ZS83_NOTFU (ELAV-like protein (Fragment) n=18 Tax=Aplocheiloidei TaxID=45443 RepID=A0A1A7ZS83_NOTFU)

HSP 1 Score: 150 bits (378), Expect = 5.400e-37
Identity = 75/167 (44.91%), Postives = 112/167 (67.07%), Query Frame = 0
Query:  221 SENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFA 387
            S  NLI+NYLP  +++ ELR++F+  G +   K++ D+  G S+GYGFV F  +  A  A   +NG+ +  K IKVS ARPSS  IK++ LY+++LP   SQ  + ++F  +G+II  R LVD  + +SR  AF++FD R EA+DA+K +NGHV PG+ + ++VKFA
Sbjct:   60 SRTNLIVNYLPQSMSQDELRSLFSSVGVVESAKLIRDKVAGHSLGYGFVNFVNHSDAERAISTLNGLRLQSKTIKVSFARPSSDMIKDANLYISSLPRTVSQQDLEDMFAPFGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKHLNGHVPPGSSEPIIVKFA 226          
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: UPI001FB0A823 (ELAV-like protein 2 isoform X14 n=4 Tax=Euteleostomi TaxID=117571 RepID=UPI001FB0A823)

HSP 1 Score: 148 bits (374), Expect = 5.910e-37
Identity = 76/169 (44.97%), Postives = 114/169 (67.46%), Query Frame = 0
Query:  221 SENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAED 389
            S+ NLI+NYLP ++T+ EL+++F   G++   K+V D+ TG+S+GYGFV +   + A  A   +NG+ +  K IKVS ARPSS  I+++ LYV+ LP   +Q ++ ++F QYG+II  R LVD  T ISR   F++FD R EA++A+K +NG   PGA + + VKFA +
Sbjct:   66 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 234          
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Match: A0A3B4URJ8_SERDU (ELAV-like protein n=21 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B4URJ8_SERDU)

HSP 1 Score: 149 bits (377), Expect = 6.930e-37
Identity = 75/167 (44.91%), Postives = 110/167 (65.87%), Query Frame = 0
Query:  221 SENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFA 387
            +  NLI+NYLP  +++ ELR++F+  GD+   K++ D+  G S+GYGFV F     A  A   +NG+ +  K IKVS ARPSS  IK++ LY++ LP   SQ ++ ++F +YG II  R LVD  + +SR  AF++FD R EA+DA+K +NGH  PG+ + + VKFA
Sbjct:   12 ARTNLIVNYLPQSMSQDELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPSDAERAISTLNGLRLQSKTIKVSYARPSSDMIKDANLYISGLPRTLSQPELEDMFARYGHIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAVKHLNGHTPPGSSEPITVKFA 178          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1242.1862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVL9_ECTSI2.460e-17279.40Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A7S3HB55_9STRA1.080e-4047.65Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A0S7GNH3_9TELE1.570e-3744.31ELAV-like protein n=2 Tax=Poeciliopsis prolifica T... [more]
A0A667Y9X8_9TELE2.360e-3744.91ELAV-like protein n=2 Tax=Myripristis murdjan TaxI... [more]
A0A8D3AU34_SCOMX4.210e-3744.38ELAV-like protein n=1 Tax=Scophthalmus maximus Tax... [more]
A0A672KVF2_SINGR4.790e-3744.38ELAV-like protein n=4 Tax=Sinocyclocheilus grahami... [more]
A0A7E6EAG9_9CHIR5.180e-3744.51ELAV-like protein n=4 Tax=Amniota TaxID=32524 RepI... [more]
A0A1A7ZS83_NOTFU5.400e-3744.91ELAV-like protein (Fragment) n=18 Tax=Aplocheiloid... [more]
UPI001FB0A8235.910e-3744.97ELAV-like protein 2 isoform X14 n=4 Tax=Euteleosto... [more]
A0A3B4URJ8_SERDU6.930e-3744.91ELAV-like protein n=21 Tax=Percomorphaceae TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002343Paraneoplastic encephalomyelitis antigenPRINTSPR00961HUDSXLRNAcoord: 280..295
score: 38.12
coord: 223..238
score: 56.46
coord: 329..341
score: 53.08
coord: 370..387
score: 40.19
coord: 314..329
score: 28.96
coord: 296..313
score: 60.37
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 224..297
e-value: 1.9E-18
score: 77.3
coord: 310..385
e-value: 6.6E-20
score: 82.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 311..377
e-value: 2.6E-15
score: 56.0
coord: 225..295
e-value: 4.7E-15
score: 55.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 223..301
score: 17.421
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 309..389
score: 16.432
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 135..303
e-value: 5.4E-24
score: 86.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 304..423
e-value: 1.4E-22
score: 82.2
NoneNo IPR availablePANTHERPTHR10352:SF25FOUND IN NEURONS, ISOFORM A-RELATEDcoord: 206..396
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 206..396
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 304..416
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 218..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1242contigE-fasciculatus_F_contig1242:8267..19208 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1242.1862.1mRNA_E-fasciculatus_F_contig1242.1862.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1242 8267..19208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1242.1862.1 ID=prot_E-fasciculatus_F_contig1242.1862.1|Name=mRNA_E-fasciculatus_F_contig1242.1862.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=602bp
FLPHIASQRLLAAAHTESFSRHLLTEHSSRGLFLRSYEFGRDEQEEAAVL
RFWVCATLFSFCKKKKKKGLRFGLFGLQHTRAHLVQGSTHTARCVPAATS
KGETSLSKARRSVAMSSATAAAKRSPDAAATSPGYQGSDGASSNQQTTEQ
QHAVGGAESQAAPASEPAKAKEVVEPSTDAAADGAGEAAGGAKASEEGGG
DATPKEEGSDQAAAAAAGTPSENNLIINYLPSHVTEIELRNMFAVHGDLA
HVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSVAR
PSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQYGKIIECRTLVDPKTTISR
CTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAEDHHRRVQRQEQG
QHVKGGRGMDSNQGAGDQYGHQQGPHQGKGRGRGKGKGGRGGGGGGGGGG
GGGGGGMFRGNNNQSMGPRHGGHMNPGFMNNMGMQAPPPDGSSPLTHQGM
MGRYGMQVPGGGPAAAAVAAQQAAAFHAAQQVPGGYGMMHLNNSMSMMSV
GGGAPPPPAAGTGPPPPPGGPVGRADGGGASGGVVDGSAGGAVTFGMGGG
GG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR002343Hud_Sxl_RNA