prot_E-fasciculatus_F_contig12409.1854.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12409.1854.1
Unique Nameprot_E-fasciculatus_F_contig12409.1854.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length372
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12409.1854.1 vs. uniprot
Match: D7G862_ECTSI (Pc13g00620 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G862_ECTSI)

HSP 1 Score: 607 bits (1564), Expect = 1.800e-215
Identity = 330/372 (88.71%), Postives = 342/372 (91.94%), Query Frame = 0 
Query:    1 MGTEKLNSEAAALTAQRLGEALALERDHERAVSVFGRAVVASEALYGDKSTQTVACLTGLGLALFMQGQLSDAASTLGRALSVRALKPDEGMGTSTQDVTKTLDGLAKSLVHRLPEEGEGELGGALLAVDHINRLAWRYFLQKLPYQGESVMKEVLQSLLVEKEDAGL-DPSPPRDLVISALLYNLGFLRLAVLGQFGPAASVLQQAIELRKAVLGEAHSLTVQAVVSRGWALTLTGDTLLAVEELTSSADALLSAGQPHAADRLLRQALQQGYDPLGGATYAHACYTQHSNMLRGWGSEGIAKADAFCLNQLNIASKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLKFNPGDKERLWEEIALLLK 371
            MG+EKLNSEAAALTAQRLGEALALE DHERA SVFGRAVVASEAL+G KSTQ VACLTGLGLALF QGQLSDAASTLGRALSV AL+PDEGM TSTQDVTKTLDGLAKSL+ R PE GE ELGGALLAVDHIN LA RYF+QKLP+QGESV    LQSL VEKEDAG  +PS  RDLVISALL+NLGFLRLAVLG+F  AASVLQQAIELRKAVLGEAHSLT+QAVVSRGWALTLTGDTLLAVEELTS+A+ALLSAGQPHAADRLLRQ LQQGYDPLGGATYAHACYTQHSNMLR WGSEGIAKADAFCLNQLNIA KARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLK NP DKERLWEEI LLLK
Sbjct:  105 MGSEKLNSEAAALTAQRLGEALALEGDHERAASVFGRAVVASEALFGVKSTQAVACLTGLGLALFRQGQLSDAASTLGRALSVHALRPDEGMVTSTQDVTKTLDGLAKSLIRRPPEGGESELGGALLAVDHINPLAGRYFVQKLPHQGESV----LQSLYVEKEDAGSSEPSALRDLVISALLFNLGFLRLAVLGEFSSAASVLQQAIELRKAVLGEAHSLTMQAVVSRGWALTLTGDTLLAVEELTSAAEALLSAGQPHAADRLLRQGLQQGYDPLGGATYAHACYTQHSNMLRAWGSEGIAKADAFCLNQLNIAKKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLKLNPSDKERLWEEIGLLLK 472
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BLAST of mRNA_E-fasciculatus_F_contig12409.1854.1 vs. uniprot
Match: A0A6H5JZA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZA8_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 3.390e-71
Identity = 114/122 (93.44%), Postives = 116/122 (95.08%), Query Frame = 0 
Query:  250 DALLSAGQPHAADRLLRQALQQGYDPLGGATYAHACYTQHSNMLRGWGSEGIAKADAFCLNQLNIASKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLKFNPGDKERLWEEIALLLK 371
            DALLSAGQPHAADRLLRQ LQQGYDPLGGATYAHACYTQHS MLR WGSEGIAKADAFCLNQL+IA KARLTGKERPMKRATRTLAVAVRAQIEDETEGRELL+ NPGDKERLWEEI LLLK
Sbjct:   17 DALLSAGQPHAADRLLRQGLQQGYDPLGGATYAHACYTQHSTMLRAWGSEGIAKADAFCLNQLDIAKKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLELNPGDKERLWEEIGLLLK 138
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12409.1854.1 vs. uniprot
Match: A0A6H5JX93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX93_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.100e-25
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 0 
Query:    1 MGTEKLNSEAAALTAQRLGEALALERDHERAVSVFGRAVVASEALYGDKSTQTVACLTGLGLALFMQ 67
            MG+EKLNSEAAALTAQRLGEALALE DHERA SVFGRAVVASEAL+G KSTQ VACLTGLGLALF Q
Sbjct:  105 MGSEKLNSEAAALTAQRLGEALALEGDHERAASVFGRAVVASEALFGVKSTQAVACLTGLGLALFQQ 171
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12409.1854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G862_ECTSI1.800e-21588.71Pc13g00620 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JZA8_9PHAE3.390e-7193.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX93_9PHAE1.100e-2589.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 13..83
e-value: 1.0E-8
score: 35.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 126..353
e-value: 3.1E-5
score: 25.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 3..121
e-value: 2.6E-9
score: 38.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 171..245
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 12..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12409contigE-fasciculatus_F_contig12409:545..3708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12409.1854.1mRNA_E-fasciculatus_F_contig12409.1854.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12409 17..4030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12409.1854.1 ID=prot_E-fasciculatus_F_contig12409.1854.1|Name=mRNA_E-fasciculatus_F_contig12409.1854.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=372bp
MGTEKLNSEAAALTAQRLGEALALERDHERAVSVFGRAVVASEALYGDKS
TQTVACLTGLGLALFMQGQLSDAASTLGRALSVRALKPDEGMGTSTQDVT
KTLDGLAKSLVHRLPEEGEGELGGALLAVDHINRLAWRYFLQKLPYQGES
VMKEVLQSLLVEKEDAGLDPSPPRDLVISALLYNLGFLRLAVLGQFGPAA
SVLQQAIELRKAVLGEAHSLTVQAVVSRGWALTLTGDTLLAVEELTSSAD
ALLSAGQPHAADRLLRQALQQGYDPLGGATYAHACYTQHSNMLRGWGSEG
IAKADAFCLNQLNIASKARLTGKERPMKRATRTLAVAVRAQIEDETEGRE
LLKFNPGDKERLWEEIALLLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf