prot_E-fasciculatus_F_contig1240.1849.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1240.1849.1
Unique Nameprot_E-fasciculatus_F_contig1240.1849.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length248
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1240.1849.1 vs. uniprot
Match: D7G5U1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U1_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 1.510e-131
Identity = 188/221 (85.07%), Postives = 194/221 (87.78%), Query Frame = 0 
Query:   28 PVEDDDEARRMSGISLTRPFPRIVKASHVLGWILIAAGSAEVVVGALIFNDWKYAGGFWVGFMALAAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAAALSLVLVDGLVYNKVHSTEGNCVETSSCLDDICGGYDCVCWEPDGSADCF-GTSTRKCLQYQGSSCDEIEDSESLLAASTILHIXXXXXXXXXXXXXXXXXXXXKYTVLLRKEDGVTRVHRL 247
            PVEDD+E RRMSGISLTRPFPRIVKASHVLGWIL+AAGSAE+VVGALIFNDWKYAGGFWVGFMALAAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAA LSLVLVDGLVY+KV STEGNCV+TSSCLDDICGGYDCVCWEPDGS DCF GTSTR CLQYQGSSCDEIEDSESLLAAST LHI                    KYTVLLR+EDGVTRVHRL
Sbjct:   21 PVEDDEEERRMSGISLTRPFPRIVKASHVLGWILVAAGSAEIVVGALIFNDWKYAGGFWVGFMALAAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAATLSLVLVDGLVYSKVQSTEGNCVDTSSCLDDICGGYDCVCWEPDGSTDCFDGTSTRTCLQYQGSSCDEIEDSESLLAASTFLHIIIMALVAIAMLVTSATCCGCKYTVLLRREDGVTRVHRL 241
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BLAST of mRNA_E-fasciculatus_F_contig1240.1849.1 vs. uniprot
Match: A0A6H5KT21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT21_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.420e-66
Identity = 100/107 (93.46%), Postives = 102/107 (95.33%), Query Frame = 0 
Query:   90 MALAAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAAALSLVLVDGLVYNKVHSTEGNCVETSSCLDDICGGYDCVCWEPDGSADCF-GTSTRKCLQYQGSSCDEIE 195
            MA AAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAA LSLVLVDGLVY+KVHSTEGNCVETSSCLDDICGGYDCVCWEPDGS DCF GTSTRKCLQYQG SCD+IE
Sbjct:    1 MAFAAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAATLSLVLVDGLVYSKVHSTEGNCVETSSCLDDICGGYDCVCWEPDGSTDCFDGTSTRKCLQYQGGSCDDIE 107
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1240.1849.1 vs. uniprot
Match: A0A6H5KV47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV47_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.980e-34
Identity = 68/170 (40.00%), Postives = 94/170 (55.29%), Query Frame = 0 
Query:   39 SGISLTRPFPRIVKASHVLGWILIAAGSAEVVVGALIFNDWKYAGGFWVGFMALAAGVAGTCVSITEHSGGFPTAAFFFQSAMCLVAAALSLVLVDGLVYNKVHSTEGNCVETSSCLDDICGGYDCVCWEPDGSADCFGT-STRKCLQYQGSSCDEIEDSESLLAASTIL 207
            SG  + RP    +  SH+    L+  G + VVVG +IF +WK  G FWVG +A+AAG +G  V+  E SGG  T  +   S + L A+ +S+ L +G  +  V    GNC +   C  D C    CVCWEPDG+  C    S R C+ + G SC +I+DSE+LL  S I+
Sbjct:   16 SGAGMVRPKHAAISCSHLWANALVVVGLSSVVVGVIIFTEWKGMGSFWVGAVAMAAGTSGIYVTQGEASGGLATVFYALLSLVTLAASVVSIFLGEGATFLIVRDVNGNCRDGDDCPSDFCPEDACVCWEPDGTDVCSDAGSVRYCVPFGGDSCSDIKDSENLLLGSFII 185
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1240.1849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5U1_ECTSI1.510e-13185.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT21_9PHAE1.420e-6693.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV47_9PHAE1.980e-3440.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..104
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1240contigE-fasciculatus_F_contig1240:2961..8321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1240.1849.1mRNA_E-fasciculatus_F_contig1240.1849.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1240 784..8390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1240.1849.1 ID=prot_E-fasciculatus_F_contig1240.1849.1|Name=mRNA_E-fasciculatus_F_contig1240.1849.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=248bp
MAPPNFAPSASTPKGGAAPTMPVRNNGPVEDDDEARRMSGISLTRPFPRI
VKASHVLGWILIAAGSAEVVVGALIFNDWKYAGGFWVGFMALAAGVAGTC
VSITEHSGGFPTAAFFFQSAMCLVAAALSLVLVDGLVYNKVHSTEGNCVE
TSSCLDDICGGYDCVCWEPDGSADCFGTSTRKCLQYQGSSCDEIEDSESL
LAASTILHIIIIALVAVAMLVTSATCCCCKYTVLLRKEDGVTRVHRL*
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