prot_E-fasciculatus_F_contig124.1843.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig124.1843.1
Unique Name	prot_E-fasciculatus_F_contig124.1843.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	132

Homology

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BLAST of mRNA_E-fasciculatus_F_contig124.1843.1 vs. uniprot
Match: D7FQ17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ17_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 2.490e-73
Identity = 125/132 (94.70%), Postives = 130/132 (98.48%), Query Frame = 0

Query:    1 MGEVERPGPKGADTGDAGELMAKNPFYSLLGDCYTIVASIKTFRFSDLLSATMKTSLTKKKRRNRSLYALSVLFLLAYLTVSASRTSHAHLSLLNIITLIVLDSCHYSIHRGSTYWSPGYGVMLMAAARVSI 132
            MGEVERPGPKG D GDAGELMAKNPFYSLLGDCYTIVASIKTFRFSDLLSATM+TSLTKKKRR+RSLYALSVLFLLAYLTVSA+RTSHAHLSLLNIITL++LDSCHYSIHRGSTYWSPGYGVMLMAAARVSI
Sbjct: 1887 MGEVERPGPKGDDAGDAGELMAKNPFYSLLGDCYTIVASIKTFRFSDLLSATMRTSLTKKKRRDRSLYALSVLFLLAYLTVSAARTSHAHLSLLNIITLVLLDSCHYSIHRGSTYWSPGYGVMLMAAARVSI 2018

[Close]

BLAST of mRNA_E-fasciculatus_F_contig124.1843.1 vs. uniprot
Match: A0A6H5KQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM6_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 5.800e-73
Identity = 124/132 (93.94%), Postives = 129/132 (97.73%), Query Frame = 0

Query:    1 MGEVERPGPKGADTGDAGELMAKNPFYSLLGDCYTIVASIKTFRFSDLLSATMKTSLTKKKRRNRSLYALSVLFLLAYLTVSASRTSHAHLSLLNIITLIVLDSCHYSIHRGSTYWSPGYGVMLMAAARVSI 132
            MGEVERPGPK  D GDAGELMAKNPFYSLLGDCYTIVASI+TFRFSDLLSATM+TSLTKKKRRNRSLYALSVLFLLAYLTVSA+RTSHAHLSLLNIITL++LDSCHYSIHRGSTYWSPGYGVMLMAAARVSI
Sbjct:  187 MGEVERPGPKRDDAGDAGELMAKNPFYSLLGDCYTIVASIQTFRFSDLLSATMRTSLTKKKRRNRSLYALSVLFLLAYLTVSAARTSHAHLSLLNIITLVLLDSCHYSIHRGSTYWSPGYGVMLMAAARVSI 318

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig124.1843.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig124.1843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FQ17_ECTSI	2.490e-73	94.70	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KQM6_9PHAE	5.800e-73	93.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 110..132
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 26..45
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 66..83
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 84..88
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 89..109
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 46..65
None	No IPR available	TMHMM	TMhelix		coord: 67..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig124	contig	E-fasciculatus_F_contig124:1610..2597 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig124.1843.1	mRNA_E-fasciculatus_F_contig124.1843.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig124 1610..2597 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig124.1843.1 ID=prot_E-fasciculatus_F_contig124.1843.1|Name=mRNA_E-fasciculatus_F_contig124.1843.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp
MGEVERPGPKGADTGDAGELMAKNPFYSLLGDCYTIVASIKTFRFSDLLS
ATMKTSLTKKKRRNRSLYALSVLFLLAYLTVSASRTSHAHLSLLNIITLI
VLDSCHYSIHRGSTYWSPGYGVMLMAAARVSI