prot_E-fasciculatus_F_contig1239.1839.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1239.1839.1
Unique Nameprot_E-fasciculatus_F_contig1239.1839.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length506
Homology
BLAST of mRNA_E-fasciculatus_F_contig1239.1839.1 vs. uniprot
Match: D7FQD3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD3_ECTSI)

HSP 1 Score: 726 bits (1873), Expect = 1.070e-259
Identity = 457/504 (90.67%), Postives = 474/504 (94.05%), Query Frame = 0
Query:    4 MAAAAGRLRVSCGRGLWWALCARRPPSPAPSYIFTTSQPSCLHVGQI-RLSSVTRPPSELEHTD-AAAREAAEQGLRILRERSESLQQDDAVEAWRLLLKAACAETVPPDVYFALGNLHYTWGELLEFGKRAELGAEGAARAVVAEIKDLRKQAMKKRQLAPASFGSKGRAGKGPTKTARKSEGSASGKEERVLSDGAREAGGGPGAPPPEVDHPEAWEWYLKAALSGDTRAMVQLGDIALESRTQSAANAQHAEEWYRKAAAGDPPQPDACFQMARIHHEGIGLPCDPVRARELYDEALQAGSSAAAYFLGQRFHVGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAFFHGEDGFARDPRAAFRCYLASADDGHADASYCLGVMQYAMGDAEEAFRRYQTAAESGNVLAWRNLAAMYALGEGVARSEQMAKSILATFGDEIERREKEERGAAEDGEEKR 505
            MAA  GRLRVSCGRGLWWAL ARRPP+PAPSYIFTTSQP CLH G   RLSSVTRPPSE EHTD AAAREAAEQGLRILRERSESL+QDDAVEAWRLLLKAACAETVPPDVYFALGNLHY WGELLEFGKRAELGAEGAA+AVVAEIKDLRKQAMKKRQLAP SFGSKGRAGK PTKT R S+ SA G + RVLS GAREAGGG G  PPEVD+PEAWEWYLKAALSGDTRAM+QLGDIALE++T+SA NAQHAEEWYRKAA G+PPQPDACFQMARIHHEGIG PCDP RARELYDEALQAGSSAAAYFLGQRFHVGDE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAFFHGEDGFARDPRAAFRCY ++ADDGHADASYCLGVMQYAMGDAEEAFRRYQTAAE+GNVLAWRNLAAMYALGEGVARSEQMAK+ILATFGDEIERREKEE+ AA+DGEEKR
Sbjct:    1 MAAVVGRLRVSCGRGLWWALHARRPPNPAPSYIFTTSQPGCLHAGHFSRLSSVTRPPSEHEHTDPAAAREAAEQGLRILRERSESLEQDDAVEAWRLLLKAACAETVPPDVYFALGNLHYIWGELLEFGKRAELGAEGAAKAVVAEIKDLRKQAMKKRQLAPGSFGSKGRAGKSPTKTTRMSDVSARGNDGRVLSVGAREAGGGRGTTPPEVDYPEAWEWYLKAALSGDTRAMMQLGDIALEAKTKSAGNAQHAEEWYRKAAVGNPPQPDACFQMARIHHEGIGAPCDPTRARELYDEALQAGSSAAAYFLGQRFHVGDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAFFHGEDGFARDPRAAFRCYSSAADDGHADASYCLGVMQYAMGDAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAKNILATFGDEIERREKEEKRAAKDGEEKR 504          
BLAST of mRNA_E-fasciculatus_F_contig1239.1839.1 vs. uniprot
Match: A0A835YR63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR63_9STRA)

HSP 1 Score: 114 bits (284), Expect = 9.880e-25
Identity = 109/277 (39.35%), Postives = 134/277 (48.38%), Query Frame = 0
Query:  240 IALESRTQSAANAQHAEEWYRKAAAGDPPQPDACFQMARIHHEGIGLPC-DPVRARELYDEALQAGSSAAAYFLGQRFHVGD-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAFFHGEDGFARDPRAAFRCYLASADDG-----------------HADASYCLGVMQY----AMGDAEEAFRRYQTAAESGNVLAWRNLAAMYALGEGVARSEQMAKSILATFGDEIERREKE 493
            +A++   +SAAN   AE WY +AAAG PP PDA FQ+AR++HEG+G    DPVRA ELY  A   GSSAA + LG    VGD E                          XXXXXXXXXXXXXXXXXXXX                       G  +  G  G  R    A   +  +                     HA+A+YC  VM+Y       D   AF  YQTAAE+G+VLAWR +A+M+ LGEGV R E  A+ I+   G  I + E+E
Sbjct:    1 MAMQDPGESAANTPFAEHWYLRAAAGAPPLPDALFQLARVYHEGLGPAGEDPVRALELYQRAAAEGSSAALFLLGHAHSVGDAELGLPRDARAALAYLQRSADIDEHPEAXXXXXXXXXXXXXXXXXXXXEGRYVELVARAAAAGSANALFAEGDLWRRGLAGRERSEEKALHWFELAXXXXXXXXXXXXXXXXXXXXXHAEAAYCAAVMRYHGWGCDKDLRAAFELYQTAAEAGHVLAWREVASMHMLGEGVPRCEATARHIMQVMGKAIHKAEQE 277          
BLAST of mRNA_E-fasciculatus_F_contig1239.1839.1 vs. uniprot
Match: A0A7S3L9E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9E1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.170e-13
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 0
Query:  391 GSAFFHGEDGFARDPRAAFRCYLASADDGHADASYCLGVMQYAMG----DAEEAFRRYQTAAESGNVLAWRNLAAMYALGEGVARSEQMAKSI 479
            G + +HGE+G+ R+   A   +L +AD GHADA+   G M ++      D  +AF  YQ A E GN+  WRN+AA YA GEGVA+S +MAK I
Sbjct:   30 GHSLYHGENGYPRNLHLALGDFLKAADAGHADAAVSAGAMLHSGDGVPKDQNKAFELYQHAGELGNLEGWRNVAACYATGEGVAQSLEMAKHI 122          
BLAST of mRNA_E-fasciculatus_F_contig1239.1839.1 vs. uniprot
Match: A0A6S8F6I7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8F6I7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.520e-7
Identity = 45/127 (35.43%), Postives = 62/127 (48.82%), Query Frame = 0
Query:  207 GAPPPEVDHPEAWEWYLKAALSGDTRAMVQLGDIAL---ESRTQSAANA------QHAEEWYRKAAAGDPPQPDACFQMARIHHEGI--GLPCDPVRARELYDEALQA-GSSAAAYFLGQRFHVGDE 321
            G P  E +   A  W+  AA  G T AMVQLG++ L   E+  +   N       + A +WY KAAA DPP PDA + +  +++EG    L  DP R+  L   A       +A +F+G     GDE
Sbjct:  217 GEPKLEKNEEAAIRWFSLAAKQGSTDAMVQLGNVLLHRVETEKRQFKNKDVRGKLKEALDWYEKAAAHDPPHPDALYNLGLLYYEGFHDSLEIDPARSFLLIKTAADVCNDPSALFFVGHIGLQGDE 343          
BLAST of mRNA_E-fasciculatus_F_contig1239.1839.1 vs. uniprot
Match: A0A7S3PNW5_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PNW5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.150e-7
Identity = 45/127 (35.43%), Postives = 62/127 (48.82%), Query Frame = 0
Query:  207 GAPPPEVDHPEAWEWYLKAALSGDTRAMVQLGDIAL---ESRTQSAANA------QHAEEWYRKAAAGDPPQPDACFQMARIHHEGI--GLPCDPVRARELYDEALQA-GSSAAAYFLGQRFHVGDE 321
            G P  E +   A  W+  AA  G T AMVQLG++ L   E+  +   N       + A +WY KAAA DPP PDA + +  +++EG    L  DP R+  L   A       +A +F+G     GDE
Sbjct:  217 GEPKLEKNEEAAIRWFSLAAKQGSTDAMVQLGNVLLHRVETEKRQFKNKDVRGKLKEALDWYEKAAAHDPPHPDALYNLGLLYYEGFHDSLEIDPARSFLLIKTAADVCNDPSALFFVGHIGLQGDE 343          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1239.1839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FQD3_ECTSI1.070e-25990.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YR63_9STRA9.880e-2539.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3L9E1_9STRA1.170e-1346.24Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A6S8F6I7_9STRA1.520e-735.43Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3PNW5_9STRA2.150e-735.43Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..90
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 127..313
coord: 331..478
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 331..478
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 214..352
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 270..305
e-value: 1.0E-4
score: 31.7
coord: 453..485
e-value: 54.0
score: 7.3
coord: 231..267
e-value: 6.9
score: 15.1
coord: 384..420
e-value: 3.9E-5
score: 33.1
coord: 306..344
e-value: 0.0032
score: 26.7
coord: 421..452
e-value: 36.0
score: 8.8
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 270..305
e-value: 0.017
score: 15.8
coord: 306..344
e-value: 2.2E-4
score: 21.8
coord: 384..420
e-value: 0.013
score: 16.2
coord: 207..230
e-value: 0.3
score: 11.8
coord: 232..265
e-value: 0.03
score: 15.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 367..501
e-value: 1.1E-21
score: 79.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 42..366
e-value: 2.7E-31
score: 111.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1239contigE-fasciculatus_F_contig1239:10338..13870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1239.1839.1mRNA_E-fasciculatus_F_contig1239.1839.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1239 10329..14468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1239.1839.1 ID=prot_E-fasciculatus_F_contig1239.1839.1|Name=mRNA_E-fasciculatus_F_contig1239.1839.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=506bp
MSAMAAAAGRLRVSCGRGLWWALCARRPPSPAPSYIFTTSQPSCLHVGQI
RLSSVTRPPSELEHTDAAAREAAEQGLRILRERSESLQQDDAVEAWRLLL
KAACAETVPPDVYFALGNLHYTWGELLEFGKRAELGAEGAARAVVAEIKD
LRKQAMKKRQLAPASFGSKGRAGKGPTKTARKSEGSASGKEERVLSDGAR
EAGGGPGAPPPEVDHPEAWEWYLKAALSGDTRAMVQLGDIALESRTQSAA
NAQHAEEWYRKAAAGDPPQPDACFQMARIHHEGIGLPCDPVRARELYDEA
LQAGSSAAAYFLGQRFHVGDEELGISPDGVRALKLLRQASDKGHAEATFY
LAQAHRTGCPEMSLSQNLGAFGELVQQAAAAGSADALFALGSAFFHGEDG
FARDPRAAFRCYLASADDGHADASYCLGVMQYAMGDAEEAFRRYQTAAES
GNVLAWRNLAAMYALGEGVARSEQMAKSILATFGDEIERREKEERGAAED
GEEKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR006597Sel1-like