mRNA_E-fasciculatus_F_contig12383.1836.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: D8LGK6_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK6_ECTSI) HSP 1 Score: 479 bits (1232), Expect = 7.680e-167 Identity = 224/228 (98.25%), Postives = 226/228 (99.12%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEH 684
V+ SEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALT AGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAIL+SGELYTWGGGEH
Sbjct: 53 VVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEH 280
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A2D4CB68_PYTIN (BTB domain-containing protein (Fragment) n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB68_PYTIN) HSP 1 Score: 359 bits (921), Expect = 2.490e-119 Identity = 161/231 (69.70%), Postives = 195/231 (84.42%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
V+ ++DG VYTWGRGDDGRLGHGDNGWK+VPR+VE L G++I Q TCGSYHTAAVT GEL+TWGGGMYGKLGHGNE+GH TPC+V+ L+ + R Q+ACGSRHTVVL + VYTWGDKE GV GH + DGHQYLPR++E L+ + V Q++ACGFHTAALT++GE+FT+GEGKFGRLGH ERNQ+V R VE L+GKRV +ACGGFH+AA+ E+GE+ TWGGGEHGQ+
Sbjct: 44 VVLTDDGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKKIRQVTCGSYHTAAVTVSGELFTWGGGMYGKLGHGNETGHSTPCLVEALKAQPVR--QVACGSRHTVVLLENKDVYTWGDKEKGVSGHGDTDGHQYLPRVVEELRGQHVKQISACGFHTAALTESGEVFTFGEGKFGRLGHNSERNQLVARKVETLVGKRVKQIACGGFHTAAVTETGEVXTWGGGEHGQL 272
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: H3H2V0_PHYRM (BTB domain-containing protein n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3H2V0_PHYRM) HSP 1 Score: 355 bits (912), Expect = 6.220e-118 Identity = 161/231 (69.70%), Postives = 194/231 (83.98%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
V+ +++G VYTWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT G+LYTWGGGMYGKLGHGNE+GH TP +V+ L+ G +V Q+ACGSRHTVVL + VYTWGDKENGV GH + +GHQYLP +E L+ K++ Q++ACGFHTAAL++ GE+FT+GEGKFGRLGH ERNQ V R+VEAL GKRV VACGGFH+AA+ E+GE+YTWGGGEHGQ+
Sbjct: 47 VVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLK--GMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARLVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQL 275
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: T0QPW3_SAPDV (BTB domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0QPW3_SAPDV) HSP 1 Score: 353 bits (905), Expect = 8.700e-117 Identity = 160/231 (69.26%), Postives = 192/231 (83.12%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
V+ E+G VYTWGRGDDGRLGHGDNGWK+VPR+VEAL G+RI Q TCGSYHTAAVT GELYTWGGGMYGKLGHGNESGH P +V L + +V Q+ACGSRHTVVL + VYTWGDKENGV GH + DGHQYLP ++ L+ K++ Q+AACGFHTAAL++ GE++T+GEGKFGRLGH ERNQ+V R+VE L GKR+ VACGGFH+AA+ ++GE++TWGGGEHGQ+
Sbjct: 53 VVLDENGDVYTWGRGDDGRLGHGDNGWKFVPRLVEALHGKRIKQVTCGSYHTAAVTVTGELYTWGGGMYGKLGHGNESGHSVPYLVDTLSNH--KVDQVACGSRHTVVLLENRDVYTWGDKENGVSGHGDTDGHQYLPCAVDELKDKSIMQIAACGFHTAALSEEGELYTFGEGKFGRLGHNSERNQLVARVVETLHGKRIKQVACGGFHTAAVTDTGEIFTWGGGEHGQL 281
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A8J5MCI4_9STRA (BTB domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MCI4_9STRA) HSP 1 Score: 353 bits (907), Expect = 1.130e-116 Identity = 161/231 (69.70%), Postives = 192/231 (83.12%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
V+ +E+G VYTWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT G+LYTWGGGMYGKLGHGNE+GH TP +V+ L+ +V Q+ACGSRHTVVL + VYTWGDKENGV GH + +GHQYLP +E L+ K++ Q++ACGFHTAAL++ GE+FT+GEGKFGRLGH ERNQ V R VEAL GKRV VACGGFH+AA+ E+GE+YTWGGGEHGQ+
Sbjct: 142 VVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKS--MQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQL 370
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: B7G795_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G795_PHATC) HSP 1 Score: 344 bits (883), Expect = 2.430e-116 Identity = 155/231 (67.10%), Postives = 187/231 (80.95%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
V+ + DG V+TWGRGDDGRLGHGDNGWKYVPR+ ++L GQ ++Q TCGSYHTAAVT G+LYTWGGGMYGKLGHG+E+GH TP V+ L GA V QIACGSRHT ++T G +YTWGDKENGV GH +GHQYLPR+LES+ AK V Q++ACGFHTA +TDAGE+FTWGEGKFGRLGH ERN P +V+ ++GK+ V+CGGFH+A + E G LYT+GGGEHGQ+
Sbjct: 46 VVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQL 274
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A7S2R4V3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R4V3_9STRA) HSP 1 Score: 342 bits (876), Expect = 4.210e-116 Identity = 155/231 (67.10%), Postives = 182/231 (78.79%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
V+ + +G VYTWGRGDDGRLGHGDNGWKYVPRI+ +L GQ I Q TCGSYHTAAV G+LYTWGGGMYGKLGHGNESGH TP ++ L G V+QIACGSRHT V+T G +YTWGDKENGV GH + +GHQY P++LE L K V Q++ACGFHT LTD+ E++TWGEGKFGRLGHG ERN PR+VE L+GK V CGGFH+A I E G++YT+GGGEHGQ+
Sbjct: 3 VVLTTNGEVYTWGRGDDGRLGHGDNGWKYVPRIILSLAGQVICQVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPKRLEGLT--GLTVSQIACGSRHTAVITSTGAMYTWGDKENGVAGHGDNEGHQYTPKLLEKLAGKRVIQLSACGFHTGCLTDSREVYTWGEGKFGRLGHGAERNCHSPRLVEVLLGKNPKQVTCGGFHTAVITEDGKMYTFGGGEHGQL 231
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A5D6YMT2_9STRA (BTB domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMT2_9STRA) HSP 1 Score: 351 bits (901), Expect = 4.950e-116 Identity = 160/231 (69.26%), Postives = 190/231 (82.25%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
V+ +E+G V+TWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT G+LYTWGGGMYGKLGHGNE+GH TP +V+ L+ G +V Q+ACGSRHTVVL + VYTWGDKENGV GH +G QYLP LE L+ K+V Q++ACGFHTAALTDAGE++T+G+GKFGRLGH ERNQ V R V+ L KRV VACGGFH+AA+ E+GE+YTWGGGEHGQ+
Sbjct: 66 VVLTEEGEVFTWGRGDDGRLGHGDNGWKFVPRLVEELRGRNIRQVTCGSYHTAAVTVAGDLYTWGGGMYGKLGHGNETGHSTPFLVESLK--GLQVRQVACGSRHTVVLLENRDVYTWGDKENGVSGHGETEGQQYLPSSLEELRGKSVKQISACGFHTAALTDAGEVYTFGDGKFGRLGHNSERNQAVARFVDGLADKRVRQVACGGFHTAAVTETGEVYTWGGGEHGQL 294
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A1V9ZGJ4_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGJ4_9STRA) HSP 1 Score: 357 bits (916), Expect = 1.450e-115 Identity = 161/231 (69.70%), Postives = 192/231 (83.12%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
V+ EDG VYTWGRGDDGRLGHGDNGWK+VPR+VE+L G+RI Q TCGSYHTAAVT GELYTWGGGMYGKLGHGNESGH P +V L + +V Q+ACGSRHTVVL + VYTWGDKENGV GH + DGHQYLP ++ L+ K++ Q+AACGFHTAAL+D GE++T+GEGKFGRLGH ERNQ+V RMVE L G+R+ VACGGFH+AA+ ++GE++TWGGGEHGQ+
Sbjct: 288 VVLDEDGNVYTWGRGDDGRLGHGDNGWKFVPRLVESLHGKRIKQVTCGSYHTAAVTSTGELYTWGGGMYGKLGHGNESGHSVPYLVSTLSNH--KVDQVACGSRHTVVLLENRDVYTWGDKENGVSGHGDTDGHQYLPCAVDELKDKSIMQIAACGFHTAALSDKGELYTFGEGKFGRLGHNSERNQLVARMVETLSGRRIKQVACGGFHTAAVTDTGEVFTWGGGEHGQL 516
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Match: A0A6V2KK16_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2KK16_9STRA) HSP 1 Score: 352 bits (903), Expect = 2.050e-115 Identity = 160/231 (69.26%), Postives = 185/231 (80.09%), Query Frame = 1
Query: 1 VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQV 693
V+ + DG VYTWGRGDDGRLGHGDNGWKYVPRI ++L GQ IVQ TCGSYHTAAV G+LYTWGGGMYGKLGHGNESGH TP V+ L G V+QIACGSRHT V+T G +YTWGDKENGV GH + +GHQY P++LE L K V Q++ACGFHT LTDA E+FTWGEGKFGRLGHG ERN PR+VE L+GK+ VACGGFH+A I + G++YT+GGGEHGQ+
Sbjct: 131 VVLTTDGEVYTWGRGDDGRLGHGDNGWKYVPRIAQSLAGQVIVQVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEGL--VGLTVSQIACGSRHTAVITSTGALYTWGDKENGVAGHGDTEGHQYTPKLLERLAGKRVVQLSACGFHTGCLTDAAEVFTWGEGKFGRLGHGAERNCHSPRLVEVLLGKKPRQVACGGFHTAVITDDGKMYTFGGGEHGQL 359 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12383.1836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12383.1836.1 >prot_E-fasciculatus_F_contig12383.1836.1 ID=prot_E-fasciculatus_F_contig12383.1836.1|Name=mRNA_E-fasciculatus_F_contig12383.1836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=231bp VLFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYback to top mRNA from alignment at E-fasciculatus_F_contig12383:36..3512+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12383.1836.1 ID=mRNA_E-fasciculatus_F_contig12383.1836.1|Name=mRNA_E-fasciculatus_F_contig12383.1836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3477bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12383:36..3512+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12383:36..3512+ >mRNA_E-fasciculatus_F_contig12383.1836.1 ID=mRNA_E-fasciculatus_F_contig12383.1836.1|Name=mRNA_E-fasciculatus_F_contig12383.1836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1386bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12383:36..3512+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |