prot_E-fasciculatus_F_contig12381.1835.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig12381.1835.1
Unique Name	prot_E-fasciculatus_F_contig12381.1835.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	133

Homology

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 7.780e-81
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0

Query:    7 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTST 131
            KSLEALKRCDNDP+VITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPT T
Sbjct:  341 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTGT 465

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 3.950e-78
Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 0

Query:    7 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTST 131
            KSLEALKRCDNDP+VITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTST
Sbjct:  702 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTST 826

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.190e-47
Identity = 81/115 (70.43%), Postives = 96/115 (83.48%), Query Frame = 0

Query:    6 GKSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGA 120
            GKS+EALKRCDNDP+VITAVAR F  DRKY KARKWFNRA+ LD + GDAWAA++AFELQQGT  +Q DV+ RCV AEP+HGELW SVSK T N+RLD+ ++L+KVVA YF+  A
Sbjct:  701 GKSVEALKRCDNDPHVITAVARLFEKDRKYPKARKWFNRAVALDADNGDAWAAFFAFELQQGTAEQQADVIARCVKAEPSHGELWCSVSKKTGNQRLDRETVLRKVVAQYFAPDA 815

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A7S2USD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USD3_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.890e-44
Identity = 74/113 (65.49%), Postives = 89/113 (78.76%), Query Frame = 0

Query:    7 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDG 119
            +S+EALKRCDNDPNVI AVA  F  +RK AK+RKWFNRA+ LDP++GDAWA +YAFELQ G + +Q+++L RCVAAEP HGELW   SK TENRR +  +ILKKVVAA    G
Sbjct:  213 RSVEALKRCDNDPNVILAVAVLFQNERKVAKSRKWFNRAVALDPDLGDAWALFYAFELQHGKKEDQEELLKRCVAAEPTHGELWCGTSKKTENRRCNTETILKKVVAALAGIG 325

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK)

HSP 1 Score: 161 bits (408), Expect = 9.510e-44
Identity = 76/118 (64.41%), Postives = 93/118 (78.81%), Query Frame = 0

Query:    7 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVI 124
            +S+EALKRCDNDP+V+ AVAR F +DRK+AKARKWF RA+ L P +GDAWA +YAFEL+QGT  EQ+ VLDRCVAAEPAHGELW +V+K T NRRL  A +L+KVVA   +  A   +
Sbjct:  606 RSVEALKRCDNDPHVVLAVARLFASDRKHAKARKWFERAVALRPGLGDAWARFYAFELRQGTPEEQRAVLDRCVAAEPAHGELWQAVAKRTANRRLGPAEVLRKVVAELAAGAAAPAV 723

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A438KFT4_VITVI (Protein STABILIZED 1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438KFT4_VITVI)

HSP 1 Score: 145 bits (367), Expect = 3.390e-42
Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 0

Query:    7 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAV 121
            KSL+ALK+CD+DP+VI AVA+ FW DRK  KAR W NRA+TL P++GD WA YY FE+Q G+E  QKDVL RCVAAEP HGE W  +SK  EN  L   +ILKK V A   + +V
Sbjct:   39 KSLDALKKCDHDPHVIAAVAKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYKFEVQHGSEENQKDVLRRCVAAEPKHGEKWKVISKAVENSHLPTEAILKKAVVALGKEESV 153

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A2R6QX31_ACTCC (Uncharacterized protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QX31_ACTCC)

HSP 1 Score: 147 bits (370), Expect = 1.400e-40
Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = 0

Query:    7 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAA 114
            KS++ALK+CD+DP+VI AVA+ FW DRK  KAR W NRA+TL P++GD WA YY FELQ GTE  QKDVL RC+AAEP HGE W ++SK  EN      +ILKKVV A
Sbjct:  217 KSMDALKKCDHDPHVIAAVAKLFWHDRKVDKARNWLNRAVTLAPDIGDFWALYYKFELQHGTEDNQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPTEAILKKVVVA 324

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: UPI00098E1367 (protein STABILIZED1 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E1367)

HSP 1 Score: 151 bits (381), Expect = 8.210e-40
Identity = 73/120 (60.83%), Postives = 84/120 (70.00%), Query Frame = 0

Query:    7 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPG 126
            KS +ALKRCD+DP+VI  VA+ FW DRK  KAR WFNRA+TL P++GD WA YY FELQ G E  QKDVL RCVAAEP HGE WTS+SK  EN  L   +ILKKVV A   +    +  G
Sbjct:  821 KSADALKRCDHDPHVIATVAKLFWHDRKVDKARSWFNRAVTLSPDVGDFWALYYKFELQHGNEDTQKDVLKRCVAAEPKHGERWTSISKAVENSHLLVEAILKKVVVALGKEENPAIADG 940

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A5P1FRW4_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FRW4_ASPOF)

HSP 1 Score: 151 bits (381), Expect = 8.350e-40
Identity = 73/120 (60.83%), Postives = 84/120 (70.00%), Query Frame = 0

Query:    7 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPG 126
            KS +ALKRCD+DP+VI  VA+ FW DRK  KAR WFNRA+TL P++GD WA YY FELQ G E  QKDVL RCVAAEP HGE WTS+SK  EN  L   +ILKKVV A   +    +  G
Sbjct:  893 KSADALKRCDHDPHVIATVAKLFWHDRKVDKARSWFNRAVTLSPDVGDFWALYYKFELQHGNEDTQKDVLKRCVAAEPKHGERWTSISKAVENSHLLVEAILKKVVVALGKEENPAIADG 1012

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BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A0C9S9J4_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_239_3443 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9S9J4_9SPER)

HSP 1 Score: 150 bits (380), Expect = 1.140e-39
Identity = 73/116 (62.93%), Postives = 84/116 (72.41%), Query Frame = 0

Query:    7 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVV 122
            KS++ALKRCD+DP VI AVA+ FW DRK  KAR WFNRA+TL P+ GD WA YY FELQ GTE  Q+DVL RC+AAEP HGE WTS+SK  EN      +ILKKVV A   +  VV
Sbjct:  903 KSMDALKRCDHDPYVIAAVAKLFWHDRKVDKARNWFNRAVTLAPDNGDFWAQYYKFELQHGTEEIQQDVLKRCIAAEPRHGERWTSISKAVENSHQPIEAILKKVVVAIGKEEGVV 1018

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KYH2_9PHAE	7.780e-81	98.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FHD2_ECTSI	3.950e-78	99.20	PRP1_N domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A835YM25_9STRA	3.190e-47	70.43	PRP1_N domain-containing protein n=1 Tax=Tribonema...	[more]
A0A7S2USD3_9STRA	2.890e-44	65.49	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S3XY73_HETAK	9.510e-44	64.41	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A438KFT4_VITVI	3.390e-42	60.00	Protein STABILIZED 1 n=1 Tax=Vitis vinifera TaxID=...	[more]
A0A2R6QX31_ACTCC	1.400e-40	62.96	Uncharacterized protein n=1 Tax=Actinidia chinensi...	[more]
UPI00098E1367	8.210e-40	60.83	protein STABILIZED1 n=1 Tax=Asparagus officinalis ...	[more]
A0A5P1FRW4_ASPOF	8.350e-40	60.83	Uncharacterized protein n=1 Tax=Asparagus officina...	[more]
A0A0C9S9J4_9SPER	1.140e-39	62.93	TSA: Wollemia nobilis Ref_Wollemi_Transcript_239_3...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 9..119 e-value: 6.9E-11 score: 43.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 10..93
IPR027108	Pre-mRNA-processing factor 6/Prp1/STA1	PANTHER	PTHR11246:SF1	PRE-MRNA-PROCESSING FACTOR 6	coord: 7..114
None	No IPR available	PANTHER	PTHR11246	PRE-MRNA SPLICING FACTOR	coord: 7..114
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 19..86 score: 8.553
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 19..52 score: 9.027

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig12381	contig	E-fasciculatus_F_contig12381:2942..3646 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig12381.1835.1	mRNA_E-fasciculatus_F_contig12381.1835.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig12381 2942..3646 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig12381.1835.1 ID=prot_E-fasciculatus_F_contig12381.1835.1|Name=mRNA_E-fasciculatus_F_contig12381.1835.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=133bp
PTPPTGKSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDP
NMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENR
RLDKASILKKVVAAYFSDGAVVVIPGGPTSTG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR013026	TPR-contain_dom
IPR027108	Prp6/Prp1/STA1
IPR011990	TPR-like_helical_dom_sf