prot_E-fasciculatus_F_contig12381.1834.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12381.1834.1
Unique Nameprot_E-fasciculatus_F_contig12381.1834.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length47
Homology
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: D8LE82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE82_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.900e-19
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    1 LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            LEAVRLERR+GN+KG DSLM KALQECPGSGVLWAEE L AQR+EQK
Sbjct:    3 LEAVRLERRSGNSKGVDSLMTKALQECPGSGVLWAEEALAAQRSEQK 49          
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: K0R5N5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R5N5_THAOC)

HSP 1 Score: 64.3 bits (155), Expect = 8.370e-11
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            LEA+RLERRAGN+K A SLMA+ALQECPGSG L AE I+ + R EQK
Sbjct:  814 LEAIRLERRAGNDKLAVSLMARALQECPGSGRLLAENIITSPRVEQK 860          
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: A0A7S2EY21_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EY21_TRICV)

HSP 1 Score: 62.4 bits (150), Expect = 3.990e-10
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            +EAVRLERRAGN+K A +LMA+ALQECP SG+L AE I  A R EQK
Sbjct:  403 VEAVRLERRAGNDKLASALMARALQECPSSGLLLAENIATAPRPEQK 449          
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: A0A6U1QKH3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1QKH3_CYCTE)

HSP 1 Score: 61.6 bits (148), Expect = 4.970e-10
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            LEA+RLERRAGN+K A +LMA+ALQECP SG L AE I+ A R EQK
Sbjct:   99 LEAIRLERRAGNDKLAVTLMARALQECPTSGKLLAENIMTAPRVEQK 145          
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: A0A7S4QCV6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QCV6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 7.470e-10
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            +EAVRLERRAGN+K A +LMA+ALQ+CP SG+L AE I+ + R EQK
Sbjct:  860 VEAVRLERRAGNDKLASALMARALQDCPSSGLLLAENIITSPRVEQK 906          
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: A0A7S2USD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USD3_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.160e-10
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    2 EAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            EA+RLERR GN+K A++L AKALQ+CP SG++WAEEI  A R +Q+
Sbjct:  166 EAIRLERRHGNSKLAENLTAKALQDCPSSGIIWAEEISCAPRHQQR 211          
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: A0A7S3MBI4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBI4_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.130e-9
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            LE +RLERR+G+ K A+SLMAKAL+ECP SG LWAEE+L   +  QK
Sbjct:  222 LECIRLERRSGHEKLAESLMAKALRECPKSGALWAEELLTCAKPLQK 268          
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: A0A7S3MCI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCI9_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.400e-9
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            LE +RLERR+G+ K A+SLMAKAL+ECP SG LWAEE+L   +  QK
Sbjct:  782 LECIRLERRSGHEKLAESLMAKALRECPKSGALWAEELLTCAKPLQK 828          
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: B8C695_THAPS (RNA splicing factor n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C695_THAPS)

HSP 1 Score: 60.8 bits (146), Expect = 1.400e-9
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            +EA+RLERRAGN+K A SLMA+ALQECP SG+L AE I  + R EQK
Sbjct:  771 VEAIRLERRAGNDKLAVSLMARALQECPSSGLLLAENISTSPRVEQK 817          
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Match: A0A453J3T8_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453J3T8_AEGTS)

HSP 1 Score: 59.7 bits (143), Expect = 1.460e-9
Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK 47
            L A+R E R GNNK ADSL+AKALQECP SG+LWA  I +  RA++K
Sbjct:   41 LAAIRAELRHGNNKEADSLLAKALQECPTSGILWAAAIEMVPRAQRK 87          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12381.1834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE82_ECTSI1.900e-1985.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K0R5N5_THAOC8.370e-1172.34Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2EY21_TRICV3.990e-1070.21Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A6U1QKH3_CYCTE4.970e-1070.21Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4QCV6_9STRA7.470e-1065.96Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2USD3_9STRA9.160e-1063.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3MBI4_9STRA1.130e-963.83Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3MCI9_9STRA1.400e-963.83Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
B8C695_THAPS1.400e-968.09RNA splicing factor n=1 Tax=Thalassiosira pseudona... [more]
A0A453J3T8_AEGTS1.460e-963.83Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..46
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12381contigE-fasciculatus_F_contig12381:965..1105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12381.1834.1mRNA_E-fasciculatus_F_contig12381.1834.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12381 965..1105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12381.1834.1 ID=prot_E-fasciculatus_F_contig12381.1834.1|Name=mRNA_E-fasciculatus_F_contig12381.1834.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=47bp
LEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027108Prp6/Prp1/STA1