prot_E-fasciculatus_F_contig12366.1823.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12366.1823.1
Unique Nameprot_E-fasciculatus_F_contig12366.1823.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length481
Homology
BLAST of mRNA_E-fasciculatus_F_contig12366.1823.1 vs. uniprot
Match: A0A6H5JCF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF1_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 3.600e-102
Identity = 281/471 (59.66%), Postives = 289/471 (61.36%), Query Frame = 0
Query:    1 MPKVTDEELNGAAAALLGLHARNASSKEVSPAVAPASRPAPVVTRADKDQSGPRHQGLPRGQNPTSPSVPPVAAPAGDNGGRTNQQHQHQQPIPDEEPRSHPYPFFPSPVLASSSGPPSHPEDQQHXXXXXXXXRRVDYYTAACTTAEVAPVVSSRQDFAPAAGAIGSRWIPHPPQNAXXXXXXXXXXXXXSEWTPRFDXXXXXXXXXXXXXDPRAVMALHQNPPSLDPWAFLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPAA------SATRPVPAHAARGNVHYPPQQHEYRGQHDERQYSYPPQHAYHXXXXXXXXXXXXXXXXXXXXXXXLQQQKVDKPSINNLWSLIPGTLERDGGGTRPGNXXXXXXXXXXXXXXXXXXX------AGGYDND--RWFAPDVHPPLTDMARRHRA 457
            MP VTDEELNGAAAALLGLHARN SSKEV PA APA RPAPVVTRADKDQS PR+QGLPRGQNPTSPSVPPVAA AGD GGRTN Q Q                F+PSPVL S S PPSHP     XXXXXX  R VDYY    TT EV PV+SSRQDFAPA  A  +RWIPH PQNA             SEW PRFD             DP +VM LHQNPPSLD WAFLQ XXXXXXXXXXXXXXXXX                                                           AA      SAT P P HAARGNVH PPQQH Y GQHDERQYS PPQH               XXXXXXXX    +QQKVDKPSINNLWSLIPGTL+RDGGG RP  XXXXXXXXXXXXXXXXXXX      AG YD+D  RWFAPDVHPPLTDMARRHRA
Sbjct:    1 MPNVTDEELNGAAAALLGLHARN-SSKEVPPAFAPAPRPAPVVTRADKDQSKPRYQGLPRGQNPTSPSVPPVAA-AGDEGGRTNPQ-QXXXXXXXXXXXXXXXXFYPSPVLTSRSAPPSHPXXXXXXXXXXXHCR-VDYYA---TTKEV-PVISSRQDFAPATQATRARWIPHLPQNAAAAAPRRRQ----SEWAPRFDPPMAAAS------DPWSVMGLHQNPPSLDAWAFLQQXXXXXXXXXXXXXXXXXPAQQQPEISLLSAVVVGPGGSSRQQFRVYQQQDVAPHHHVVRDHYHRDYANVTAAPAAAAAAHLATASATHPAPTHAARGNVHQPPQQHGYVGQHDERQYSCPPQHG------------NQXXXXXXXXEYSQEQQKVDKPSINNLWSLIPGTLKRDGGGARPXXXXXXXXXXXXXXXXXXXXXXXXXXGAGAYDHDNARWFAPDVHPPLTDMARRHRA 441          
BLAST of mRNA_E-fasciculatus_F_contig12366.1823.1 vs. uniprot
Match: D7FVM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM3_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 4.750e-54
Identity = 106/122 (86.89%), Postives = 109/122 (89.34%), Query Frame = 0
Query:    1 MPKVTDEELNGAAAALLGLHARNASSKEVSPAVAPASRPAPVVTRADKDQSGPRHQGLPRGQNPTSPSVPPVAAPAGDNGGRTNQQHQHQQPIPDEEPRSHPYPFFPSPVLASSSGPPSHPE 122
            MP VTDEELNGAAAALLGLHARNASSKEV PAVAPA RPAPV TRAD DQS P +QG+PRGQNPTSPSVPPVAA AGD GGRTN Q Q QQPIPDEEPRSHPYPF+PSPVLAS SGPPSHPE
Sbjct:    1 MPNVTDEELNGAAAALLGLHARNASSKEVPPAVAPAPRPAPVATRADNDQSKPLYQGMPRGQNPTSPSVPPVAA-AGDKGGRTNPQQQ-QQPIPDEEPRSHPYPFYPSPVLASRSGPPSHPE 120          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12366.1823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCF1_9PHAE3.600e-10259.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVM3_ECTSI4.750e-5486.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12366contigE-fasciculatus_F_contig12366:2332..4048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12366.1823.1mRNA_E-fasciculatus_F_contig12366.1823.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12366 2044..4048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12366.1823.1 ID=prot_E-fasciculatus_F_contig12366.1823.1|Name=mRNA_E-fasciculatus_F_contig12366.1823.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=481bp
MPKVTDEELNGAAAALLGLHARNASSKEVSPAVAPASRPAPVVTRADKDQ
SGPRHQGLPRGQNPTSPSVPPVAAPAGDNGGRTNQQHQHQQPIPDEEPRS
HPYPFFPSPVLASSSGPPSHPEDQQHQQHQHQQHRRVDYYTAACTTAEVA
PVVSSRQDFAPAAGAIGSRWIPHPPQNAAAAAAAAAPPRRQSEWTPRFDP
PPMAAAAAAAAADPRAVMALHQNPPSLDPWAFLQQQQQQRRRQHPQQQPE
ISLLSVAAAVGPGGSSRRQQFTGYHQDVAPHHHIVRDQYHRDYAAVTAAA
AAAAAAAAAHPAASATRPVPAHAARGNVHYPPQQHEYRGQHDERQYSYPP
QHAYHHHRQQQEQLKYYQEQEQRQRQRELQQQKVDKPSINNLWSLIPGTL
ERDGGGTRPGNNGSSSSSAAPTHSQQQTGGAGGYDNDRWFAPDVHPPLTD
MARRHRARALARLRARRRALAEAAATAAAAA
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