mRNA_E-fasciculatus_F_contig12364.1822.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Match: A0A6H5KAM6_9PHAE (FAM192A_Fyv6_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM6_9PHAE) HSP 1 Score: 263 bits (673), Expect = 7.710e-83 Identity = 220/270 (81.48%), Postives = 221/270 (81.85%), Query Frame = 2
Query: 53 MAHIGFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTVAIAEPKKPKAKPPADDERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXDDKRAKXXXXXXXXVVGASPGSSAXXXXXXXXXXREGAEGGAGDKSEDPGATGKGKGAAXXXGDDKEEGEGK-----EDGAEGLSSLLGAYQSDSSDGDGDA 847
MAHIGFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTVAIAEPKKPKAKPPAD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS DDKRAK XXXXX XXXXXXXXXXRE GATGK KG XXX EDG +GLSSLLGAYQSDSSDGDGDA
Sbjct: 1 MAHIGFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTVAIAEPKKPKAKPPADGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDDKRAKKRGXXXXXXX-------XXXXXXXXXXXREXXXXXXXXXXXXXGATGKEKGXXXXXXXXXXXXXXXXXXXGEDGVKGLSSLLGAYQSDSSDGDGDA 263
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Match: D8LM72_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM72_ECTSI) HSP 1 Score: 280 bits (717), Expect = 9.380e-83 Identity = 213/267 (79.78%), Postives = 213/267 (79.78%), Query Frame = 2
Query: 53 MAHIGFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTVAIAEPKKPKAKPPADDERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXDDKRAKXXXXXXXXVVGASPGSSAXXXXXXXXXXREGAEGGAGDKSEDPGATGKGKGAAXXX--GDDKEEGEGKEDGAEGLSSLLGAYQSDSSDGDGDA 847
MAHIGFVSTSVLESKDGIDFNEEVRKESEDV EAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTVAIAEPKKPKAKPPAD R XXXXXXXXXXXXXS DDKRAKXXXXXXXX XXXXXXXXXXRE ATGKGKGA XXX GDDKE G KEDG EGLSSLLGAYQSDSSD DGDA
Sbjct: 1 MAHIGFVSTSVLESKDGIDFNEEVRKESEDVREAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTVAIAEPKKPKAKPPADGGRGNQDQQDGRAGAPPPVVAXXXXXXXXXXXXXSKDDKRAKXXXXXXXXXX-------XXXXXXXXXXXREXXXXXXXXXXXXSAATGKGKGAXXXXATGDDKEGG--KEDGGEGLSSLLGAYQSDSSDDDGDA 258
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Match: A0A835Z9S0_9STRA (FAM192A_Fyv6_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S0_9STRA) HSP 1 Score: 120 bits (300), Expect = 3.350e-28 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 2
Query: 53 MAHIGFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTVAIA 412
M IGFVSTSVLESKDGIDF +E R E+E+V EAE+ A EA ++PLWEQL + + K K+D VR ++FAPP+ LD+E+ FLQ VE R AK+ +K E E+ FA ARANQ VA A
Sbjct: 1 MTSIGFVSTSVLESKDGIDFGDEKRLETEEVKEAEKRALEAARRPLWEQLQEREEAKAEKYDEVRKAIFAPPKGLDEEDVTFLQSVEEARRAAKKTEKHREVLEIEAFASARANQIVAAA 120
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Match: W7U024_9STRA (FAM192A_Fyv6_N domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U024_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 7.850e-15 Identity = 50/119 (42.02%), Postives = 78/119 (65.55%), Query Frame = 2
Query: 53 MAHIGFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKE--ADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTV 403
MA I FV+TSVL S DG+ + E ++ E +R+ KE A + LWEQL ++++K+A++DAV +FAPP+ALD+EE+++L G+ Q + R+ + E EL F+LARAN+ +
Sbjct: 1 MAAIRFVATSVLSSDDGVSYKTEQLEDEE--AHKKRLEKEKAAHSRTLWEQLEEQKEKKKAEYDAVTKQIFAPPKALDEEEASYLDGILEQEKARERRRAEEEERELAAFSLARANRDL 117
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Match: A0A7S2W1Z4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1Z4_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.730e-10 Identity = 49/134 (36.57%), Postives = 72/134 (53.73%), Query Frame = 2
Query: 17 RRRTPPPHLAEGMAHIGFVSTSVLE-SKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTVAIAE 415
R R G GFV T+VLE DG+ E R E+++V E A + KPL+EQL ++ +KQ +DAV +FAPP+ALDDE+ +L + + K+ K E ++L F AR ++T+ AE
Sbjct: 10 RPRDGSHRALRGTMSSGFVKTAVLEPGSDGLSHGGETRLETDEVKRQEARAAQQAAKPLFEQLEEEKQKKQDAYDAVTKMIFAPPKALDDEDIEYLNDAAERDKQRKDLIKAQEDQDLDAFKNARLSRTLHSAE 143
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Match: W2FTS7_PHYPR (FAM192A_Fyv6_N domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2FTS7_PHYPR) HSP 1 Score: 63.9 bits (154), Expect = 1.310e-8 Identity = 40/108 (37.04%), Postives = 68/108 (62.96%), Query Frame = 2
Query: 65 GFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALAR 388
GFVSTSVL S DG+ F + V ++ A R A KPL+EQL G++++K +++ + + FAPP+ LD+EE ++Q +E++R + + +++ E+L F +AR
Sbjct: 11 GFVSTSVLTSSDGL-FGDNVEEKRVTEAPAPRPEDTAGYKPLYEQLQGRKEQKDSEW-KEKNNPFAPPKGLDEEEFEYIQDLESKREDVERKRQAQHEEDLAQFLVAR 116
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Match: A0A8K1FA38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA38_PYTOL) HSP 1 Score: 64.3 bits (155), Expect = 3.570e-8 Identity = 48/129 (37.21%), Postives = 80/129 (62.02%), Query Frame = 2
Query: 65 GFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKE--ADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALARANQTVAIAEPKKPKAKPPA 445
GFVST+VL S DG+ F + V E + +LEA + AD KPL+E+L +D+K ++ + + +APP+ALDDEE F++ +E+++ +++ ++++ + E++ F LAR A P P AKP A
Sbjct: 16 GFVSTTVLTSADGL-FGDNV--EEKRILEAPAPSARDAADYKPLYERLQDMKDQKDREW-KEKNNPYAPPKALDDEEIEFIRDLESRKADSETQRQEQQREDIAEFMLARE----AAKNPGAPSAKPVA 136
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Match: W2R087_PHYPN (FAM192A_Fyv6_N domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2R087_PHYPN) HSP 1 Score: 63.9 bits (154), Expect = 4.960e-8 Identity = 40/108 (37.04%), Postives = 68/108 (62.96%), Query Frame = 2
Query: 65 GFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALAR 388
GFVSTSVL S DG+ F + V ++ A R A KPL+EQL G++++K +++ + + FAPP+ LD+EE ++Q +E++R + + +++ E+L F +AR
Sbjct: 22 GFVSTSVLTSSDGL-FGDNVEEKRVTEAPAPRPEDTAGYKPLYEQLQGRKEQKDSEW-KEKNNPFAPPKGLDEEEFEYIQDLESKREDVERKRQAQHEEDLAQFLVAR 127
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Match: K3WHH2_GLOUD (FAM192A_Fyv6_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHH2_GLOUD) HSP 1 Score: 58.2 bits (139), Expect = 4.340e-6 Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 2
Query: 65 GFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLAGKRDEKQAKFDAVRASMFAPPRALDDEESNFLQGVEAQRLEAKERKKKWETEELRGFALAR 388
GFVST+VL S DG+ F + V ++ A AD KPL+E+L +D+K +++ + + FAPP+ALD+EE F++ +E ++ ++ +++ E+L F LAR
Sbjct: 16 GFVSTAVLTSSDGL-FGDNVEEQRISEAPAPNAQDAADYKPLYERLQELKDKKDSEW-KEKHNPFAPPKALDEEEIQFIRDLEDRQAASELQRQTQHNEDLAEFLLAR 121 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12364.1822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12364.1822.1 >prot_E-fasciculatus_F_contig12364.1822.1 ID=prot_E-fasciculatus_F_contig12364.1822.1|Name=mRNA_E-fasciculatus_F_contig12364.1822.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=266bp MAHIGFVSTSVLESKDGIDFNEEVRKESEDVLEAERIAKEADKKPLWEQLback to top mRNA from alignment at E-fasciculatus_F_contig12364:273..2942- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12364.1822.1 ID=mRNA_E-fasciculatus_F_contig12364.1822.1|Name=mRNA_E-fasciculatus_F_contig12364.1822.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2670bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12364:273..2942- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12364:273..2942- >mRNA_E-fasciculatus_F_contig12364.1822.1 ID=mRNA_E-fasciculatus_F_contig12364.1822.1|Name=mRNA_E-fasciculatus_F_contig12364.1822.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1596bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12364:273..2942- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |