prot_E-fasciculatus_F_contig12362.1821.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12362.1821.1
Unique Nameprot_E-fasciculatus_F_contig12362.1821.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length236
Homology
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: D8LMT7_ECTSI (Phasmid Socket Absent family member (Psa-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMT7_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 8.600e-85
Identity = 176/235 (74.89%), Postives = 179/235 (76.17%), Query Frame = 0
Query:    1 MSAAAEAADAVAAAATANHDRDRGFPPSGGSSGGAREGAGAAVEGSSSSSRPGVEDGDVEMPDVKDLAGPAPERRPGEEPAEYTAPVAANGGRAGSXXXXXXXAEEDGGVAAXXXXXXXTSGSRGARDCFGGSSSXXXSGSLXXXXXXTGGLELASAARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFEQARSMLPK 235
            MSAAAEAADAVAAAATAN DRDRGFPP+GGS GG R G  AAVEGS S  RPG EDGDVEMPDVKDL GPAP  RPGE PA  TAPVAANGG AG        A EDG VAA                   G+   XX    XXXXXX  GLELA+AARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETER CLEHDRAELVFEQARSMLPK
Sbjct:    1 MSAAAEAADAVAAAATANQDRDRGFPPTGGSGGGERAGVAAAVEGSGS--RPGEEDGDVEMPDVKDLTGPAPRSRPGEPPAVDTAPVAANGGEAG--------AGEDGRVAAA------------------GAPGSXXXXXXXXXXXXXXGLELATAARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERACLEHDRAELVFEQARSMLPK 207          
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: A0A6H5JSE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSE9_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.490e-83
Identity = 179/235 (76.17%), Postives = 182/235 (77.45%), Query Frame = 0
Query:    1 MSAAAEAADAVAAAATANHDRDRGFPPSGGSSGGAREGAGAAVEGSSSSSRPGVEDGDVEMPDVKDLAGPAPERRPGEEPAEYTAPVAANGGRAGSXXXXXXXAEEDGGVAAXXXXXXXTSGSRGARDCFGGSSSXXXSGSLXXXXXXTGGLELASAARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFEQARSMLPK 235
            MSAAAEAADAV AAATANHDRDRGFPP+GGS GG R G  AAVE   S SRPG EDGD+EMPDVKDLAGPAP  RPGE PA  TAPVAANGG AG        A EDG VA          GSR AR C GGSSS   S S        GGLELA+AARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETER CLEHDRAELVFEQARSMLPK
Sbjct:  912 MSAAAEAADAVTAAATANHDRDRGFPPAGGSGGGFRAGVPAAVE--ESGSRPGEEDGDLEMPDVKDLAGPAPRSRPGEPPAVDTAPVAANGGGAG--------AGEDGRVAVGGAP-----GSRAARGCAGGSSSASLSSSA-------GGLELATAARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERACLEHDRAELVFEQARSMLPK 1124          
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: A0A0R3QGH9_9BILA (SWIRM-assoc_1 domain-containing protein n=1 Tax=Brugia timori TaxID=42155 RepID=A0A0R3QGH9_9BILA)

HSP 1 Score: 60.1 bits (144), Expect = 1.020e-7
Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 0
Query:  157 AARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFE 227
            AA AA L+ A ++A+ LA  EERR ++L+A L+E ++++LE KL  FDEL+ +++ ERE LE+ R +L+ E
Sbjct:    1 AAAAAALAAAAVKAKHLAAIEERRIKSLVAQLVETQMKKLEMKLRHFDELEAIMDKEREALEYQRQQLILE 71          
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: A0A2A2M0X9_9BILA (Phosphoacetylglucosamine mutase n=2 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2M0X9_9BILA)

HSP 1 Score: 62.0 bits (149), Expect = 2.020e-7
Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  153 ELASAARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFE 227
            E    A AA LS A ++A+ LA  EERR ++L+A L+E ++++LE KL  FDEL+Q+++ ERE LE+ R +L+ E
Sbjct: 1028 EAVQTAAAAALSAAAVKAKHLATIEERRIKSLVAQLVETQLKKLEMKLRHFDELEQIMDKEREGLEYQRQQLILE 1102          
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: A0A0N4YPP7_NIPBR (Uncharacterized protein n=1 Tax=Nippostrongylus brasiliensis TaxID=27835 RepID=A0A0N4YPP7_NIPBR)

HSP 1 Score: 61.6 bits (148), Expect = 2.280e-7
Identity = 34/75 (45.33%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  153 ELASAARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFE 227
            E   AA  A L+ A ++A+ LA  EERR ++L+A L+E ++++LE KL  FDEL+Q+++ ERE LE+ R +L+ E
Sbjct:  460 ESVQAAAGAALAAAAVKAKHLATIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKEREALEYQRQQLILE 534          
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: A0A0D8XNV6_DICVI (SWIRM domain protein n=1 Tax=Dictyocaulus viviparus TaxID=29172 RepID=A0A0D8XNV6_DICVI)

HSP 1 Score: 61.6 bits (148), Expect = 2.420e-7
Identity = 34/75 (45.33%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  153 ELASAARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFE 227
            E   AA  A L+ A ++A+ LA  EERR ++L+A L+E ++++LE KL  FDEL+Q+++ ERE LE+ R +L+ E
Sbjct:  438 ESVQAAAGAALAAAAVKAKHLATIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKEREALEYQRQQLILE 512          
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: G5EF87_CAEEL (SANT domain-containing protein n=8 Tax=Caenorhabditis elegans TaxID=6239 RepID=G5EF87_CAEEL)

HSP 1 Score: 61.2 bits (147), Expect = 3.320e-7
Identity = 33/71 (46.48%), Postives = 54/71 (76.06%), Query Frame = 0
Query:  157 AARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFE 227
            AA A+ L+ A ++A+ LA+ EERR ++L+A L+E ++++LE KL  FDEL+Q+++ ERE LE+ R +L+ E
Sbjct:  448 AAAASCLAAAAVKAKHLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILE 518          
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: A0A2H2I4A1_CAEJA (Uncharacterized protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2I4A1_CAEJA)

HSP 1 Score: 61.2 bits (147), Expect = 3.320e-7
Identity = 33/71 (46.48%), Postives = 54/71 (76.06%), Query Frame = 0
Query:  157 AARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFE 227
            AA A+ L+ A ++A+ LA+ EERR ++L+A L+E ++++LE KL  FDEL+Q+++ ERE LE+ R +L+ E
Sbjct:  439 AAAASCLAAAAVKAKHLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILE 509          
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: A8XGN4_CAEBR (Protein CBR-SWSN-1 n=2 Tax=Caenorhabditis TaxID=6237 RepID=A8XGN4_CAEBR)

HSP 1 Score: 61.2 bits (147), Expect = 3.330e-7
Identity = 33/71 (46.48%), Postives = 54/71 (76.06%), Query Frame = 0
Query:  157 AARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFE 227
            AA A+ L+ A ++A+ LA+ EERR ++L+A L+E ++++LE KL  FDEL+Q+++ ERE LE+ R +L+ E
Sbjct:  450 AAAASCLAAAAVKAKHLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILE 520          
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Match: G0N0X1_CAEBE (Uncharacterized protein n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0N0X1_CAEBE)

HSP 1 Score: 61.2 bits (147), Expect = 3.330e-7
Identity = 33/71 (46.48%), Postives = 54/71 (76.06%), Query Frame = 0
Query:  157 AARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKLHCFDELDQVLETERECLEHDRAELVFE 227
            AA A+ L+ A ++A+ LA+ EERR ++L+A L+E ++++LE KL  FDEL+Q+++ ERE LE+ R +L+ E
Sbjct:  450 AAAASCLAAAAVKAKHLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILE 520          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12362.1821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMT7_ECTSI8.600e-8574.89Phasmid Socket Absent family member (Psa-1) n=1 Ta... [more]
A0A6H5JSE9_9PHAE1.490e-8376.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0R3QGH9_9BILA1.020e-746.48SWIRM-assoc_1 domain-containing protein n=1 Tax=Br... [more]
A0A2A2M0X9_9BILA2.020e-746.67Phosphoacetylglucosamine mutase n=2 Tax=Diploscapt... [more]
A0A0N4YPP7_NIPBR2.280e-745.33Uncharacterized protein n=1 Tax=Nippostrongylus br... [more]
A0A0D8XNV6_DICVI2.420e-745.33SWIRM domain protein n=1 Tax=Dictyocaulus viviparu... [more]
G5EF87_CAEEL3.320e-746.48SANT domain-containing protein n=8 Tax=Caenorhabdi... [more]
A0A2H2I4A1_CAEJA3.320e-746.48Uncharacterized protein n=1 Tax=Caenorhabditis jap... [more]
A8XGN4_CAEBR3.330e-746.48Protein CBR-SWSN-1 n=2 Tax=Caenorhabditis TaxID=62... [more]
G0N0X1_CAEBE3.330e-746.48Uncharacterized protein n=1 Tax=Caenorhabditis bre... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 174..206
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 58..229
NoneNo IPR availablePANTHERPTHR12802:SF41BRAHMA ASSOCIATED PROTEIN 155 KDAcoord: 58..229
IPR032451SMARCC, C-terminalPFAMPF16495SWIRM-assoc_1coord: 162..230
e-value: 2.1E-14
score: 53.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12362contigE-fasciculatus_F_contig12362:880..4004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12362.1821.1mRNA_E-fasciculatus_F_contig12362.1821.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12362 32..4049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12362.1821.1 ID=prot_E-fasciculatus_F_contig12362.1821.1|Name=mRNA_E-fasciculatus_F_contig12362.1821.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=236bp
MSAAAEAADAVAAAATANHDRDRGFPPSGGSSGGAREGAGAAVEGSSSSS
RPGVEDGDVEMPDVKDLAGPAPERRPGEEPAEYTAPVAANGGRAGSGAGA
GAGAEEDGGVAAAAAAAAGTSGSRGARDCFGGSSSSGGSGSLSSSSAATG
GLELASAARAAVLSVAGLQARGLAEQEERRTEALLADLLEARVQRLEAKL
HCFDELDQVLETERECLEHDRAELVFEQARSMLPK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032451SMARCC_C