prot_E-fasciculatus_F_contig1236.1818.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1236.1818.1
Unique Nameprot_E-fasciculatus_F_contig1236.1818.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length472
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1236.1818.1 vs. uniprot
Match: D7FJW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW0_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 1.130e-131
Identity = 341/479 (71.19%), Postives = 352/479 (73.49%), Query Frame = 0 
Query:    1 MRRSGCLLFFGAAVLACARASDHDSLQEDDGRKLAELSHPLSAGIRGSEADDLPLKRSWWRELTNNGHGGKSGHXXXXXXXXXXXXXXXXXXXXXXXXXXRGSGGAGFLCENGILEGGYCCSKMCGEGGXXXXXXXSRNDVTTADDCCFSHITEYCSVKGCAPCMMDEDEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDCDXXSEEEDGGEXDIXXXXE--------SDGDGSCCNKTSDLLRVVVDNGVQEEVYSNGPISIFAGCIVDMEGLDASVFLSAKVTPEDFDTEEMEYVMTSWEDDIQTATFGEPYSTMPESFSWEEYMWTDVGTYGMISIATASGHYVGFDGSSMMTSVVSSEEEPGWGCASTIKEADTTSTKRCIIMGPLEVY 471
            MR SGCLLFFGAAVL    ASDHDSLQ+D+GRKLAELSHPLSAGIRGS ADDLP KRSW RELTNNGHGGKSGH        XXXXXXXXXXXXXXXXXX       FLCENGIL              XXXXXXXSRNDVTTADDCCFSHITE CSVKGCAPCMMDED+ E  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XX        XXXXXXXXXXXXXXXXXXXXXXXX                           EDCD  SE+     X  XXXX         SDGDGSCCNKTS+LLRVVVD+GVQEEVYSNGPISIFAGC+ D E   A V LS  VTP D D+E MEYVMTSWEDDIQTAT  EPYST P S +  EY WTDVG+YGMISIATASGHYVGFDGSS+M SVVSSEEEPGWGCAS IKE D   TKRCIIMGPLEVY
Sbjct:    1 MRGSGCLLFFGAAVLVSVGASDHDSLQDDNGRKLAELSHPLSAGIRGSHADDLPRKRSWRRELTNNGHGGKSGHKRSSDSGSXXXXXXXXXXXXXXXXXXXXX--XXFLCENGILXXXXXXXXXXXXXXXXXXXXXSRNDVTTADDCCFSHITEPCSVKGCAPCMMDEDDLETDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDGGDEXXDPEPEADRXXXXXXXXXXXXXXXXXXXXXXXXGEHGRRKKPNQ----------------EDCDEDSEQXXXXXXXXXXXXXXXXXXXXXSDGDGSCCNKTSELLRVVVDDGVQEEVYSNGPISIFAGCMADNEAFPARVILSVLVTPGDSDSE-MEYVMTSWEDDIQTATSDEPYSTFPTSLNLAEYTWTDVGSYGMISIATASGHYVGFDGSSIMASVVSSEEEPGWGCASRIKETDDMGTKRCIIMGPLEVY 460
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1236.1818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJW0_ECTSI1.130e-13171.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..471
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.768

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1236contigE-fasciculatus_F_contig1236:3871..8031 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1236.1818.1mRNA_E-fasciculatus_F_contig1236.1818.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1236 3023..10280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1236.1818.1 ID=prot_E-fasciculatus_F_contig1236.1818.1|Name=mRNA_E-fasciculatus_F_contig1236.1818.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=472bp
MRRSGCLLFFGAAVLACARASDHDSLQEDDGRKLAELSHPLSAGIRGSEA
DDLPLKRSWWRELTNNGHGGKSGHKKDSSDSSSSSDEGEDGGGRHHHHGG
RGSGGAGFLCENGILEGGYCCSKMCGEGGCGGSGCGSRNDVTTADDCCFS
HITEYCSVKGCAPCMMDEDEPENDPEDEPEREHEREHEREPKRQPKREND
GRKNKRDQEDCDEDNEEEGGGDEGNYPEPEAERDPGSEPGRKPEREPERK
PEREPERKPEREPARKPEREPKRGKRGGKKKPNQEDCDEDSEEEDGGEED
IGGDEESDGDGSCCNKTSDLLRVVVDNGVQEEVYSNGPISIFAGCIVDME
GLDASVFLSAKVTPEDFDTEEMEYVMTSWEDDIQTATFGEPYSTMPESFS
WEEYMWTDVGTYGMISIATASGHYVGFDGSSMMTSVVSSEEEPGWGCAST
IKEADTTSTKRCIIMGPLEVY*
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