mRNA_E-fasciculatus_F_contig12345.1810.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12345.1810.1
Unique NamemRNA_E-fasciculatus_F_contig12345.1810.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: A0A6H5K9S3_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9S3_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 2.340e-139
Identity = 194/197 (98.48%), Postives = 195/197 (98.98%), Query Frame = 1
Query:    4 QDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHKNVLPTGEDKSPLVSVKYAMP 594
            QDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEP VVQTFDMHTCTLEDVQGVDETNVSI LEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDV+IKHKNVLPTGEDKSPLVSVKYAMP
Sbjct:  199 QDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSISLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP 395          
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: A0A835YPE5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPE5_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.660e-83
Identity = 124/198 (62.63%), Postives = 152/198 (76.77%), Query Frame = 1
Query:    4 QDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHKNVLPTGEDK-SPLVSVKYAMP 594
            +DRL+K  EY+++ Q+W+ FK E +++Y  DM VLE VYEEEQ+GYYILSSFWAEL  DQ +G+ A+++ FDMHTCTLEDVQGV+ET   I +E D RVSGFAGWFTADF GTEANP P PV LST P+NGYTHWGQQVF+L+VPH V  GG VEGT+A+ RQKEN+RLYDV +KH+    + E    P+    Y MP
Sbjct:  168 EDRLAKAAEYLQSTQEWHRFKREMRQYYDCDMNVLEGVYEEEQKGYYILSSFWAELQPDQCVGQGAMIKHFDMHTCTLEDVQGVEETPFRINVEHDCRVSGFAGWFTADFRGTEANPLPVPVLLSTAPDNGYTHWGQQVFYLEVPHWVPRGGAVEGTLALTRQKENIRLYDVGVKHRRHGNSQEPNLGPMQEATYTMP 365          
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: A0A7S2V4Q5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q5_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.480e-58
Identity = 102/203 (50.25%), Postives = 132/203 (65.02%), Query Frame = 1
Query:    4 QDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPL-EEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHK----NVLP-TGEDKSPLVSVKYAMP 594
            ++RL KQQEYI+++Q+W++FK ETKE YG+ M  LEA YE+EQR YYI ++ W+EL  DQV+  P  ++  D+HTCT  +  GV E     P   +  RVSGFAGWFT DF G         V LSTGPE GYTHWGQQVF+L  P D+  G K+ GT  ++RQKEN+RLYD+++ HK      LP  GE +   V  KY +P
Sbjct:  205 EERLGKQQEYIQSLQEWHNFKAETKERYGITMATLEADYEQEQRHYYINTASWSELHPDQVVCPPQAIKHLDLHTCTQPEAAGVAELPFCFPCGTQPTRVSGFAGWFTTDFKGRVGRSLGSEVVLSTGPEAGYTHWGQQVFYLAQPLDLQPGDKILGTFRMERQKENIRLYDLYLTHKVKRAAPLPGNGEAEDQPVVTKYELP 407          
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: W7TTE4_9STRA (Ribosomal L11 methyltransferase, PrmA n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE4_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.350e-53
Identity = 98/203 (48.28%), Postives = 127/203 (62.56%), Query Frame = 1
Query:    7 DRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPL-----EEDARVSGFAGWFTADFHGTEAN--PCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHKNVLPTGEDKSPLVSVKYAMP 594
            +R  K+QEY + ++DW +F  +TKEFY +DM  L A YEEEQ+ YY+LSS WAEL  +QV+ EP V++  D+ +CT E+++GV ET     +      E   VSGFAGWFT DF G      P P P TLST P+ GYTHWGQQVFH+ V  ++  G  VEGT+ + RQ EN RLY V +  +  +  G   S LV  KY MP
Sbjct:  213 ERQVKEQEYQQALEDWQTFSHQTKEFYDLDMAGLTAQYEEEQKEYYLLSSSWAELRAEQVVAEPVVIRRLDLKSCTFEEIKGVPETPFQFVIPPNDNNEPVYVSGFAGWFTTDFFGNAPGIEPLPHPTTLSTAPDVGYTHWGQQVFHVVVGLELFPGDVVEGTVTLVRQVENARLYHVEVAFQ--VRRGGVTSKLVRHKYQMP 413          
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: A0A812S7V0_SYMMI (PRMT10 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7V0_SYMMI)

HSP 1 Score: 175 bits (444), Expect = 1.190e-50
Identity = 84/174 (48.28%), Postives = 114/174 (65.52%), Query Frame = 1
Query:    4 QDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHI 525
            QDR  K  +Y ++M +W+ FK E +EFY VDM +LE  + +EQ  YYI SS W EL ++ V+G+P VV+  D++TC LED  GV  T     +    R SGFAGWFT DF G+  NP    VTLSTGPE GYTHWGQQVF+ +   + V G  + GT+++ RQ++N RLY++ +
Sbjct:  140 QDREGKFDDYSQSMHEWHMFKQEMQEFYQVDMNILEPKFTKEQEDYYIYSSLWTELSQEHVIGQPVVVKRLDLNTCALEDALGVAPTEYRFDVPYPVRASGFAGWFTVDFAGSVENPAEKRVTLSTGPEMGYTHWGQQVFYWKEAVNCVPGTVISGTMSLVRQEKNKRLYNMEV 313          
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: A0A482SBI8_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBI8_9ARCH)

HSP 1 Score: 160 bits (405), Expect = 2.150e-44
Identity = 76/171 (44.44%), Postives = 108/171 (63.16%), Query Frame = 1
Query:    7 DRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDV 519
            DR  K  E+  +M+DW  F  E K +Y VD+  L   + +EQ  YY+ S  W EL  + V+G+P +++  D++TCTL+D +GVD     I +  +A VSGFAGWFT DF+G+  +P    V LSTGPE G THWGQQVF+L+   D   G  + G +A+ RQ++N RLY++
Sbjct:  183 DRQCKIDEFTSSMRDWKVFSEEMKHYYNVDVGALTNTFHKEQEEYYVYSGLWTELKTEHVVGQPVIIKKLDLNTCTLKDAEGVDTVPYDIEIPFNATVSGFAGWFTVDFNGSVPSPVNKRVVLSTGPEAGNTHWGQQVFYLKEAVDCTPGTHLHGKVAMVRQEKNKRLYNL 353          
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: A0A6U3STS5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3STS5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.020e-42
Identity = 90/212 (42.45%), Postives = 122/212 (57.55%), Query Frame = 1
Query:    4 QDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPLEEDAR-------VSGFAGWFTADFH------GTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGG--KVEGTIAVKRQKENVRLYDVHIKHKNVL-PTGEDKSPLVSVKYAM 591
            ++R     +Y  +M DW  F   TK  YGVDM+VLE  +E EQR YY LSS W+EL+   VL EP +V+  DM TCTLE+ +G+   +     + D +       +SGFAGWFTADF       G  A   P P  LSTGP +GYTHWGQQ F+L     ++ G   ++EG+I + R K+N RLY+  I+HK+      E+K   V +K A+
Sbjct:  208 EERKHSSNDYNASMSDWSEFADTTKTVYGVDMSVLERSFEREQREYYSLSSRWSELEPAAVLSEPKIVKVLDMTTCTLEESKGIFAGDPYSTFDFDVKGDEVVGPISGFAGWFTADFKSRTDEAGIGAPKLPSPAFLSTGPNDGYTHWGQQTFYLLSSIPLLKGETTRLEGSIEMSRSKDNARLYNCRIRHKSSRRKNAEEKEGTVLMKGAL 419          
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: B8LEA9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEA9_THAPS)

HSP 1 Score: 152 bits (384), Expect = 1.610e-42
Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 1
Query:    4 QDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARVSGFAGWFTADFH------GTEANP-CPCPVTLSTGPENGYTHWGQQVFHLQ--VPHDVVGGGKVEGTIAVKRQKENVRLYDVHIK 528
            ++R  +  EY   M+DW  F   T   YGVDM++LE  ++ EQ+ YY+LSS WAEL    +L EP VV+ FDMH CT+ED +GV    + +  ++ +   GFAGWFT DF       G +  P  P P  LSTGPE GYTHWGQQVFHL   +P       ++ GT+ + R KE+ RLY+   +
Sbjct:   45 EERRIQHNEYAAAMEDWKEFAETTSNMYGVDMSILEKDFDREQKEYYVLSSRWAELGTGCLLAEPCVVKEFDMHVCTVEDARGV---GLEVGEDKGSGAPGFAGWFTVDFKSRTDDIGKDVAPQIPNPAYLSTGPEMGYTHWGQQVFHLPSAIPLLADQSTRINGTMEMMRTKESARLYNTRFR 225          
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: A0A7S1GNB2_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNB2_CYCTE)

HSP 1 Score: 150 bits (378), Expect = 3.450e-41
Identity = 84/182 (46.15%), Postives = 107/182 (58.79%), Query Frame = 1
Query:   25 QEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDE--TNVSIPLEEDAR-----VSGFAGWFTADFH------GTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGG--KVEGTIAVKRQKENVRLYDVHI 525
            QEY  +M DWY F   TK  YGVDM+VLE  +E EQ+ YY+LSS W+EL  + VL EP VV+  DM  CT+ED +G+ +   +     E D       +SGFAGWFTADF       G  A     P  LSTGPENGYTHWGQQ F+L     ++ G   ++ G + + R K+N RLY+  I
Sbjct:   83 QEYSNSMSDWYEFASSTKAVYGVDMSVLENEFEREQKEYYLLSSRWSELAPEAVLAEPTVVKHLDMCACTIEDSRGIIKGAPHSGFEFEIDGSEVAGPISGFAGWFTADFKSRTDEDGANAPKLLQPAFLSTGPENGYTHWGQQTFYLPSSIPLMRGQTTRLSGHLEMMRTKQNARLYNCRI 264          
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Match: A0A6U5M0R9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5M0R9_9STRA)

HSP 1 Score: 153 bits (387), Expect = 5.330e-41
Identity = 94/234 (40.17%), Postives = 125/234 (53.42%), Query Frame = 1
Query:    4 QDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPAVVQTFDMHTCTLE----------------DVQGVDETNVSIPLE----EDARVSGFAGWFTADFH------GTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGG--KVEGTIAVKRQKENVRLYDVHIKHKNVLP-TGEDKS--------PLVSVKYAMP 594
            ++R +  +EY  +M DW  F   TK  YGVDM  L++ ++ EQ+ YY+LSS W EL  +QVL EP +V+  DM TCTLE                DV G D+   S  L       A VSGF+GWFTADF       G+ A     P  LSTGPENGYTHWGQQVFHL     V+ G   +++G + + R K+N RLY+  ++       TGE K+        P++   Y +P
Sbjct:  226 EERKTSVKEYTSSMTDWNDFVESTKTMYGVDMGALDSAFQREQKEYYLLSSRWCELRMEQVLAEPCMVKYLDMCTCTLEESRGILRGAPGSSFDFDVVGEDDDTASSSLNPMPARHAVVSGFSGWFTADFKSRTDADGSMAPKISHPTLLSTGPENGYTHWGQQVFHLLSNIPVIRGQTTRIKGELELARNKDNARLYNCRVRFSTTRRRTGEPKAAGTVLMNGPVIETVYQIP 459          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12345.1810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9S3_9PHAE2.340e-13998.48Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A835YPE5_9STRA1.660e-8362.63S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S2V4Q5_9STRA2.480e-5850.25Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TTE4_9STRA3.350e-5348.28Ribosomal L11 methyltransferase, PrmA n=2 Tax=Mono... [more]
A0A812S7V0_SYMMI1.190e-5048.28PRMT10 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A482SBI8_9ARCH2.150e-4444.44Class I SAM-dependent methyltransferase n=1 Tax=ar... [more]
A0A6U3STS5_9STRA1.020e-4242.45Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B8LEA9_THAPS1.610e-4244.02Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1GNB2_CYCTE3.450e-4146.15Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A6U5M0R9_9STRA5.330e-4140.17Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12345contigE-fasciculatus_F_contig12345:72..1757 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score412.5
Seed ortholog evalue1.1e-112
Seed eggNOG ortholog2880.D8LB79
Preferred namePRMT10
KEGG rclassRC00003,RC02120,RC03388,RC03390
KEGG koko:K11434
KEGG ReactionR11216,R11217,R11219
KEGG Pathwayko04068,ko04922,map04068,map04922
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006325,GO:0006355,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008469,GO:0008757,GO:0009791,GO:0009889,GO:0009987,GO:0010228,GO:0010468,GO:0010556,GO:0016043,GO:0016273,GO:0016274,GO:0016277,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018193,GO:0018195,GO:0018216,GO:0019219,GO:0019222,GO:0019538,GO:0019919,GO:0022414,GO:0031323,GO:0031326,GO:0032259,GO:0032501,GO:0032502,GO:0034969,GO:0035241,GO:0035242,GO:0035246,GO:0035247,GO:0036211,GO:0042054,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051276,GO:0060255,GO:0061458,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.protein-arginine omega-N asymmetric methyltransferase activity
EggNOG OGsCOG0500@1,KOG1499@2759
EC2.1.1.319
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein arginine N-methyltransferase
Ec32 orthologEc-27_004880.1
Exons4
Model size597
Cds size597
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12345.1810.1prot_E-fasciculatus_F_contig12345.1810.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12345 72..1757 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927741.408039-CDS-E-fasciculatus_F_contig12345:71..1821622927741.408039-CDS-E-fasciculatus_F_contig12345:71..182Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12345 72..182 +
1695995674.859503-CDS-E-fasciculatus_F_contig12345:71..1821695995674.859503-CDS-E-fasciculatus_F_contig12345:71..182Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12345 72..182 +
1622927741.4330626-CDS-E-fasciculatus_F_contig12345:635..7731622927741.4330626-CDS-E-fasciculatus_F_contig12345:635..773Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12345 636..773 +
1695995674.8719754-CDS-E-fasciculatus_F_contig12345:635..7731695995674.8719754-CDS-E-fasciculatus_F_contig12345:635..773Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12345 636..773 +
1622927741.446982-CDS-E-fasciculatus_F_contig12345:973..12341622927741.446982-CDS-E-fasciculatus_F_contig12345:973..1234Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12345 974..1234 +
1695995674.8817508-CDS-E-fasciculatus_F_contig12345:973..12341695995674.8817508-CDS-E-fasciculatus_F_contig12345:973..1234Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12345 974..1234 +
1622927741.4634435-CDS-E-fasciculatus_F_contig12345:1670..17571622927741.4634435-CDS-E-fasciculatus_F_contig12345:1670..1757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12345 1671..1757 +
1695995674.89529-CDS-E-fasciculatus_F_contig12345:1670..17571695995674.89529-CDS-E-fasciculatus_F_contig12345:1670..1757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12345 1671..1757 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12345.1810.1

>prot_E-fasciculatus_F_contig12345.1810.1 ID=prot_E-fasciculatus_F_contig12345.1810.1|Name=mRNA_E-fasciculatus_F_contig12345.1810.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=199bp
KQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYIL
SSFWAELDKDQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARV
SGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVV
GGGKVEGTIAVKRQKENVRLYDVHIKHKNVLPTGEDKSPLVSVKYAMP*
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mRNA from alignment at E-fasciculatus_F_contig12345:72..1757+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12345.1810.1 ID=mRNA_E-fasciculatus_F_contig12345.1810.1|Name=mRNA_E-fasciculatus_F_contig12345.1810.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1686bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12345:72..1757+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAACAGGACCGGCTGTCCAAGCAGCAGGAGTACATCCGAACCATGCAGGA CTGGTACAGTTTCAAGGGGGAGACAAAGGAGTTCTACGGCGTGGACATGA CCGTGCTGGAGGTGATTTGGTTGCGTATGCTCGACCAGCTCTAGGACTCT GCGGTCATGTCTCTTTTTTGTTCTGCCCTGGTGCTCAGGCCTGTCCCAGC CGAAAGAGTTTCGTCGGAATCCCCGCGCTGGGCGGGGTGTTTTTGTTGTT GTGAAAACGCGCATGTTTGTTGGAAGAAGCCGGTGCACGACGCGGCGAAA CCGGGAATACGTCTCGCGTCAAACACTATGTCGTTTTTTTTGTTTTCCGA GACAAAGCCGTTTTGGCGTTCAATAGATACCAAAAACATTTTTTCGGCGC GTACGAGGAGGTAGAGAACTGTAGGGGCCAGCAAATCTGTCGAGACTTGC CGACGAGCGCATGATCGTCATGCCGTGCTTCTCTCGGGTTGTCCCTCGCC GACAGTACTGCCTCTGTCTGTTCTTACCCCGTCGCTCGAATGCCATCTGG TGACCCTTAAAAAGGCGGTGTACGAGGAGGAGCAGCGGGGGTACTACATC CTGTCGAGCTTCTGGGCGGAGCTGGACAAGGACCAGGTGTTAGGAGAGCC GGCCGTTGTGCAGACGTTCGACATGCACACGTGCACGCTGGAGGACGTGC AGGTGTGTGTGTAGGGTTGTTGTAGGGTATGCCATCGCCGCTGCTGCGGG GTCTGTGTCGGGGACCACGGTTATTGACCGCGTGTGGCAACGTTAGCCTT TGTTCACAGGCGACGGCGATTCCCTCTCGCGCTCTCATGCCTTCGTGCTC TTGGCGGGTAACCAATGTCTCGCCCTCCACCGCCGGCGTCGCCTCGACGC AGGGCGTCGACGAGACGAACGTGTCCATCCCGCTGGAGGAAGACGCCAGG GTCTCCGGGTTCGCGGGATGGTTCACGGCAGACTTCCACGGTACGGAAGC CAACCCGTGCCCTTGCCCAGTCACCCTCTCCACCGGCCCGGAGAATGGTT ACACGCACTGGGGGCAACAGGTTTTCCACTTGCAAGTGCCGCACGACGTT GTCGGGGGCGGCAAGGTGGAGGGGACGATCGCGGTGAAGAGGCAGAAGGA GAACGTTCGGTTGGTGAGTTGGTATTTTTTTTTTTGTTATTGGCATGGTG TAGACGGTGCAGTTGTGGTCGTAGAAGAAGGGGGATGAATTGTTTGTCTT CGAAGTATTGTTGTCGACGACGTTGCCTACGGGAGTGGCCTCTTTTCGCC TGAAATCAACAGGAAAGCTTGGCGCTAAGTAGCAGGGGAAACAGGCTTAG CGCGAGACTGTTCTGTCGAAAGGAGCTTGTCCCGTACTCGTATGTACCTC CCTCGTGCTTGATGCGCGCGCCTCGAGGACCCTTGTTTTCTGGACAAATC ACGTGGCAAGACATGTGTGGATGATGAAGGTTTTGTCGTCCAGAAGAGCG TGTGCCATTACAGGTGAGATTAGCTGGCTTTTTTTCCCATTGCCTGACAT CCGCTCCCCTCCGTGTGTTGCGGGCCGGGCGTTCTCTTTTGGGGTGCAGT ATGACGTCCACATCAAGCACAAAAACGTGCTCCCGACCGGAGAGGACAAG TCGCCCTTGGTGTCTGTAAAGTACGCCATGCCGTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12345:72..1757+

>mRNA_E-fasciculatus_F_contig12345.1810.1 ID=mRNA_E-fasciculatus_F_contig12345.1810.1|Name=mRNA_E-fasciculatus_F_contig12345.1810.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1194bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12345:72..1757+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAACAGGACCGGCTGTCCAAGCAGCAGGAGTACATCCGAACCATGCAGGA
CTGGTACAGTTTCAAGGGGGAGACAAAGGAGTTCTACGGCGTGGACATGA
CCGTGCTGGAGAAACAGGACCGGCTGTCCAAGCAGCAGGAGTACATCCGA
ACCATGCAGGACTGGTACAGTTTCAAGGGGGAGACAAAGGAGTTCTACGG
CGTGGACATGACCGTGCTGGAGGCGGTGTACGAGGAGGAGCAGCGGGGGT
ACTACATCCTGTCGAGCTTCTGGGCGGAGCTGGACAAGGACCAGGTGTTA
GGAGAGCCGGCCGTTGTGCAGACGTTCGACATGCACACGTGCACGCTGGA
GGACGTGCAGGCGGTGTACGAGGAGGAGCAGCGGGGGTACTACATCCTGT
CGAGCTTCTGGGCGGAGCTGGACAAGGACCAGGTGTTAGGAGAGCCGGCC
GTTGTGCAGACGTTCGACATGCACACGTGCACGCTGGAGGACGTGCAGGG
CGTCGACGAGACGAACGTGTCCATCCCGCTGGAGGAAGACGCCAGGGTCT
CCGGGTTCGCGGGATGGTTCACGGCAGACTTCCACGGTACGGAAGCCAAC
CCGTGCCCTTGCCCAGTCACCCTCTCCACCGGCCCGGAGAATGGTTACAC
GCACTGGGGGCAACAGGTTTTCCACTTGCAAGTGCCGCACGACGTTGTCG
GGGGCGGCAAGGTGGAGGGGACGATCGCGGTGAAGAGGCAGAAGGAGAAC
GTTCGGTTGGGCGTCGACGAGACGAACGTGTCCATCCCGCTGGAGGAAGA
CGCCAGGGTCTCCGGGTTCGCGGGATGGTTCACGGCAGACTTCCACGGTA
CGGAAGCCAACCCGTGCCCTTGCCCAGTCACCCTCTCCACCGGCCCGGAG
AATGGTTACACGCACTGGGGGCAACAGGTTTTCCACTTGCAAGTGCCGCA
CGACGTTGTCGGGGGCGGCAAGGTGGAGGGGACGATCGCGGTGAAGAGGC
AGAAGGAGAACGTTCGGTTGTATGACGTCCACATCAAGCACAAAAACGTG
CTCCCGACCGGAGAGGACAAGTCGCCCTTGGTGTCTGTAAAGTACGCCAT
GCCGTAATATGACGTCCACATCAAGCACAAAAACGTGCTCCCGACCGGAG
AGGACAAGTCGCCCTTGGTGTCTGTAAAGTACGCCATGCCGTAA
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